| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is djlA [H]
Identifier: 154245841
GI number: 154245841
Start: 2138996
End: 2139703
Strand: Reverse
Name: djlA [H]
Synonym: Xaut_1897
Alternate gene names: 154245841
Gene position: 2139703-2138996 (Counterclockwise)
Preceding gene: 154245842
Following gene: 154245840
Centisome position: 40.3
GC content: 71.47
Gene sequence:
>708_bases GTGGCTTACGGTCTGATCGGGGGAGCGGGTGTGGGATTTGCGCTGGGCGGGCCGCTCGGCGCCTTGCTCGGCGCGCTGGC GGGGCACGCCCTCGACCGGCTTTTGCTCGCGCCGGCGGAAAAGCCGGCCGCCTTCTCGGTGGCGCTCATTGCCTTGTCGG CCAAGATGGCCAAGGCTGACGGGGTGGTGGTGCCGGCGGAGGTTACGGCCTTCCGCGAGGTGTTCGACATCCCGCCCGAG AACCTCGACGCGGTGGCCCGCCTCTTCAACCTCGCCAAGCAGGACACTGCCGGCTTCGAGGCCTATGCCCGGCAGGTGGC GCAGCTGTTCGCCGACGATCCGGACACCCGCGAGGACCTGCTGGACGCCCTGTTCCATGTGGCCAAGGCCGACCATGCCC TGCACGAGAAGGAGCTGGTGTTCCTGGAGGAGGTCGCCCGCATCCTCGGCTTCACCGGCGCCGCCTATGCCCGCATCGAG GCGCGGCACGTGCGCCGGCCCGGCGACCCCTATGCCGTGCTCGACCTCGACCCGGGCGCCTCGGACGAGGAGGTGAAGGC GCGCTGGCGGGCGCTGGTGGCCAGCCACCACCCCGACAAGATCGCCGGGCGCGGCCTGCCACCCGCCGCCATCAAGCTCG CCAACGACCGGGTGGCGGCGCTGAACGCCGCCTATTCCCTCATCACCCGGCAGCGGAGGCTGGCATGA
Upstream 100 bases:
>100_bases CGGGCGGATTTTCGGCATCACCAGCTTCGAATTGGGCTGATCCGCCTTGAGAGCGCCGCGACACCCCGTTAGCTGCAACG CAGCAACGGCGGAGGGACGC
Downstream 100 bases:
>100_bases GCATGCCTGAAACGCCCATGCCCGAGCTTCTCTCCGCCCCCGACAGCCCGTGCGTGGAGAGTCTTGCGCCCTCGCCCAAT TTCGGGCCGCGCCGCGCGAA
Product: heat shock protein DnaJ domain-containing protein
Products: NA
Alternate protein names: Mucoidy activation protein mucZ [H]
Number of amino acids: Translated: 235; Mature: 234
Protein sequence:
>235_residues MAYGLIGGAGVGFALGGPLGALLGALAGHALDRLLLAPAEKPAAFSVALIALSAKMAKADGVVVPAEVTAFREVFDIPPE NLDAVARLFNLAKQDTAGFEAYARQVAQLFADDPDTREDLLDALFHVAKADHALHEKELVFLEEVARILGFTGAAYARIE ARHVRRPGDPYAVLDLDPGASDEEVKARWRALVASHHPDKIAGRGLPPAAIKLANDRVAALNAAYSLITRQRRLA
Sequences:
>Translated_235_residues MAYGLIGGAGVGFALGGPLGALLGALAGHALDRLLLAPAEKPAAFSVALIALSAKMAKADGVVVPAEVTAFREVFDIPPE NLDAVARLFNLAKQDTAGFEAYARQVAQLFADDPDTREDLLDALFHVAKADHALHEKELVFLEEVARILGFTGAAYARIE ARHVRRPGDPYAVLDLDPGASDEEVKARWRALVASHHPDKIAGRGLPPAAIKLANDRVAALNAAYSLITRQRRLA >Mature_234_residues AYGLIGGAGVGFALGGPLGALLGALAGHALDRLLLAPAEKPAAFSVALIALSAKMAKADGVVVPAEVTAFREVFDIPPEN LDAVARLFNLAKQDTAGFEAYARQVAQLFADDPDTREDLLDALFHVAKADHALHEKELVFLEEVARILGFTGAAYARIEA RHVRRPGDPYAVLDLDPGASDEEVKARWRALVASHHPDKIAGRGLPPAAIKLANDRVAALNAAYSLITRQRRLA
Specific function: Regulatory dnaK co-chaperone. Direct interaction between dnaK and djlA is needed for the induction of the wcaABCDE operon, involved in the synthesis of a colanic acid polysaccharide capsule, possibly through activation of the rcsB/rcsC phosphotransfer sig
COG id: COG1076
COG function: function code O; DnaJ-domain-containing proteins 1
Gene ontology:
Cell location: Cell inner membrane; Single-pass type III membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 J domain [H]
Homologues:
Organism=Escherichia coli, GI1786241, Length=267, Percent_Identity=24.3445692883895, Blast_Score=74, Evalue=8e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001623 - InterPro: IPR007791 - InterPro: IPR015609 - InterPro: IPR003095 [H]
Pfam domain/function: PF00226 DnaJ; PF05099 TerB [H]
EC number: NA
Molecular weight: Translated: 24939; Mature: 24808
Theoretical pI: Translated: 6.40; Mature: 6.40
Prosite motif: PS50076 DNAJ_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYGLIGGAGVGFALGGPLGALLGALAGHALDRLLLAPAEKPAAFSVALIALSAKMAKAD CCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCC GVVVPAEVTAFREVFDIPPENLDAVARLFNLAKQDTAGFEAYARQVAQLFADDPDTREDL CEEECHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHH LDALFHVAKADHALHEKELVFLEEVARILGFTGAAYARIEARHVRRPGDPYAVLDLDPGA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEECCCCC SDEEVKARWRALVASHHPDKIAGRGLPPAAIKLANDRVAALNAAYSLITRQRRLA CHHHHHHHHHHHHHCCCCCHHCCCCCCHHHEEECCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure AYGLIGGAGVGFALGGPLGALLGALAGHALDRLLLAPAEKPAAFSVALIALSAKMAKAD CCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCC GVVVPAEVTAFREVFDIPPENLDAVARLFNLAKQDTAGFEAYARQVAQLFADDPDTREDL CEEECHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHH LDALFHVAKADHALHEKELVFLEEVARILGFTGAAYARIEARHVRRPGDPYAVLDLDPGA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEECCCCC SDEEVKARWRALVASHHPDKIAGRGLPPAAIKLANDRVAALNAAYSLITRQRRLA CHHHHHHHHHHHHHCCCCCHHCCCCCCHHHEEECCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7635811; 12704232 [H]