| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
Click here to switch to the map view.
The map label for this gene is mvaB [H]
Identifier: 154245798
GI number: 154245798
Start: 2086460
End: 2087365
Strand: Reverse
Name: mvaB [H]
Synonym: Xaut_1854
Alternate gene names: 154245798
Gene position: 2087365-2086460 (Counterclockwise)
Preceding gene: 154245799
Following gene: 154245797
Centisome position: 39.32
GC content: 70.75
Gene sequence:
>906_bases ATGGCCCGCCCCCCGTCGGTGCGCATCGTCGAGGTCGGCCCGCGCGACGGGCTGCAGAACGAACCGGGCGTCGTCCCGCT CGCCGCCAAGGTGGCGCTCATCAATGCGCTGGCCGAAGCCGGGCTGACGATGATCGAGAGCGGCTCCTTCGTCTCCCCCA AATGGGTGCCGCAGATGGCGGACACCGCGCAGGTGCTGGCTGAGATCGACCGGCGCGACGGCGTGCGCTACCCGGTGCTC ACTCCCAACCTGAAGGGGCTGGAACTGGCGCTGGCCTCCGGCGTGGAGGAGGTGGCGGTGTTCGCCGCTGCATCCGAGGC CTTCAGCCAGAAGAACATCAATTGCACCATCGCCGAGAGCCTGGAGCGCTTCGCGCCCGTGCTCGACCTCGCGAAGGCGC AGGGGGTGGCGGTGCGCGGCTATGTGAGCTGCGTGCTCGGCTGCCCCTATCAGGGCGAGGTGCCGGTGGCCAAGGTGGTG GAGGTGTCCGAACGCCTCATCGCCATGGGCTGCTATGAGGTTTCGCTGGGCGACACCATCGGTGTCGGCACCCCGGACAA GGCGAAGGCCATGGCGCAGGCGGTGGCTGGCGTGATCGGCGTGGAGCGCACCGCCCTGCATTTCCACGACACCTACGGGC AGGCGCTGGCCAATGTGCTGGCCTGCCTGGAGCTGGGCATCGCCACGGTGGATGCGGCGGCGGCCGGCCTCGGCGGCTGC CCCTATGCCAAGGGCGCCTCTGGGAATCTCGCCACCGAGGATCTCGTCTACATGCTGGACGGCCTCGGCGTGGACACCGG CGTGGATCTCGACGCCCTCGCGCGCGCCGGCCGCGCCATCACCGCCGCGCTGAGCCGCACGCCGGCCTCCAAGGTCGCAC AGGCGCTGGCCGCCAAGGCGGGGTAG
Upstream 100 bases:
>100_bases CCGTCGCCGCGCCCCGCGACGGCAAGGTGAAGACGCTGAAATTCGCCGTGGGCGACCTCGTGGACGAGGGTGCCGAGCTT CTGGTTCTGGAGGACGCGTG
Downstream 100 bases:
>100_bases AGGGGGCGTCCGCTCCACCAGAACGCGGCAGTCACTTCAACGAGACGCGCCGCCAACCCGCGCGATCTCCTCCTCCCACG TCCCTGCCCCCTCCAGAACC
Product: pyruvate carboxyltransferase
Products: NA
Alternate protein names: HL; HMG-CoA lyase; 3-hydroxy-3-methylglutarate-CoA lyase [H]
Number of amino acids: Translated: 301; Mature: 300
Protein sequence:
>301_residues MARPPSVRIVEVGPRDGLQNEPGVVPLAAKVALINALAEAGLTMIESGSFVSPKWVPQMADTAQVLAEIDRRDGVRYPVL TPNLKGLELALASGVEEVAVFAAASEAFSQKNINCTIAESLERFAPVLDLAKAQGVAVRGYVSCVLGCPYQGEVPVAKVV EVSERLIAMGCYEVSLGDTIGVGTPDKAKAMAQAVAGVIGVERTALHFHDTYGQALANVLACLELGIATVDAAAAGLGGC PYAKGASGNLATEDLVYMLDGLGVDTGVDLDALARAGRAITAALSRTPASKVAQALAAKAG
Sequences:
>Translated_301_residues MARPPSVRIVEVGPRDGLQNEPGVVPLAAKVALINALAEAGLTMIESGSFVSPKWVPQMADTAQVLAEIDRRDGVRYPVL TPNLKGLELALASGVEEVAVFAAASEAFSQKNINCTIAESLERFAPVLDLAKAQGVAVRGYVSCVLGCPYQGEVPVAKVV EVSERLIAMGCYEVSLGDTIGVGTPDKAKAMAQAVAGVIGVERTALHFHDTYGQALANVLACLELGIATVDAAAAGLGGC PYAKGASGNLATEDLVYMLDGLGVDTGVDLDALARAGRAITAALSRTPASKVAQALAAKAG >Mature_300_residues ARPPSVRIVEVGPRDGLQNEPGVVPLAAKVALINALAEAGLTMIESGSFVSPKWVPQMADTAQVLAEIDRRDGVRYPVLT PNLKGLELALASGVEEVAVFAAASEAFSQKNINCTIAESLERFAPVLDLAKAQGVAVRGYVSCVLGCPYQGEVPVAKVVE VSERLIAMGCYEVSLGDTIGVGTPDKAKAMAQAVAGVIGVERTALHFHDTYGQALANVLACLELGIATVDAAAAGLGGCP YAKGASGNLATEDLVYMLDGLGVDTGVDLDALARAGRAITAALSRTPASKVAQALAAKAG
Specific function: Involved in the catabolism of branched amino acids such as leucine (Probable) [H]
COG id: COG0119
COG function: function code E; Isopropylmalate/homocitrate/citramalate synthases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HMG-CoA lyase family [H]
Homologues:
Organism=Homo sapiens, GI62198232, Length=292, Percent_Identity=59.9315068493151, Blast_Score=371, Evalue=1e-103, Organism=Homo sapiens, GI109150427, Length=292, Percent_Identity=58.5616438356164, Blast_Score=358, Evalue=4e-99, Organism=Homo sapiens, GI109150422, Length=292, Percent_Identity=58.5616438356164, Blast_Score=358, Evalue=4e-99, Organism=Homo sapiens, GI260654708, Length=292, Percent_Identity=42.1232876712329, Blast_Score=209, Evalue=3e-54, Organism=Caenorhabditis elegans, GI17510563, Length=293, Percent_Identity=53.5836177474403, Blast_Score=312, Evalue=1e-85, Organism=Drosophila melanogaster, GI24582381, Length=289, Percent_Identity=62.2837370242215, Blast_Score=367, Evalue=1e-102,
Paralogues:
None
Copy number: 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR000138 - InterPro: IPR000891 [H]
Pfam domain/function: PF00682 HMGL-like [H]
EC number: =4.1.3.4 [H]
Molecular weight: Translated: 30782; Mature: 30651
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: PS50991 PYR_CT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARPPSVRIVEVGPRDGLQNEPGVVPLAAKVALINALAEAGLTMIESGSFVSPKWVPQMA CCCCCCEEEEEECCCCCCCCCCCEEHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCHHHH DTAQVLAEIDRRDGVRYPVLTPNLKGLELALASGVEEVAVFAAASEAFSQKNINCTIAES HHHHHHHHHHHHCCCCCCEECCCCCCHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHH LERFAPVLDLAKAQGVAVRGYVSCVLGCPYQGEVPVAKVVEVSERLIAMGCYEVSLGDTI HHHHHHHHHHHHHCCEEHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCEEEEECCCEE GVGTPDKAKAMAQAVAGVIGVERTALHFHDTYGQALANVLACLELGIATVDAAAAGLGGC CCCCCHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PYAKGASGNLATEDLVYMLDGLGVDTGVDLDALARAGRAITAALSRTPASKVAQALAAKA CCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHCCHHHHHHHHCCCHHHHHHHHHHCC G C >Mature Secondary Structure ARPPSVRIVEVGPRDGLQNEPGVVPLAAKVALINALAEAGLTMIESGSFVSPKWVPQMA CCCCCEEEEEECCCCCCCCCCCEEHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCHHHH DTAQVLAEIDRRDGVRYPVLTPNLKGLELALASGVEEVAVFAAASEAFSQKNINCTIAES HHHHHHHHHHHHCCCCCCEECCCCCCHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHH LERFAPVLDLAKAQGVAVRGYVSCVLGCPYQGEVPVAKVVEVSERLIAMGCYEVSLGDTI HHHHHHHHHHHHHCCEEHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCEEEEECCCEE GVGTPDKAKAMAQAVAGVIGVERTALHFHDTYGQALANVLACLELGIATVDAAAAGLGGC CCCCCHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PYAKGASGNLATEDLVYMLDGLGVDTGVDLDALARAGRAITAALSRTPASKVAQALAAKA CCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHCCHHHHHHHHCCCHHHHHHHHHHCC G C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2687236; 2656635; 1637819 [H]