| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is 154245784
Identifier: 154245784
GI number: 154245784
Start: 2068480
End: 2069418
Strand: Reverse
Name: 154245784
Synonym: Xaut_1840
Alternate gene names: NA
Gene position: 2069418-2068480 (Counterclockwise)
Preceding gene: 154245785
Following gene: 154245782
Centisome position: 38.98
GC content: 66.67
Gene sequence:
>939_bases TTGATATTATGTACTTCCGATCAGCCTGCGCCGGGGCGGGGTCGGAACCAGTTCCAGGGTTACGCACTTCCCGTCCCGAA CGCCGCGCGCCAGAGACCCTCAATGATGCCGAGCCGCCCACCCGCCTCGTCCCGCGTCCGCCGCTGCCTGTCGCCGCTCG CGCGCAGCCTCGCCGGCGCCGGATGCCTTGCCGCGACCTTGGCCGCGACCCTTGCCGTGCTGTCGGGCACCGCTGCCTCG GCCCAGACCCTCCAGCCCCCCGGCGACCTGATGAAGCCGCAGCAGAGGCACAGCGCGCCCAACGCTGCCCCCTTGCCGCC GCAGAAGCCCGGCGCGCCCTCCTTCACGGTCGCCCAGGCGGCAGGACCGCAGGTCCAGGCGGCCGCCGCCAATCCGGACG GACGGGCACCCCGCGCCACCGTCGATCGGGTCACCAATTACTACAATTCGGTCCAGTCGCTGACCGGCAACTTTACCCAG ATCGACCCGGACGGCACCCGCCGCACCGGCGATGTCTACATGCAGAAGCCCGGCCGCGTGCGCTTCGAATATGATGCGCC GAGCCCGGTGGAGCTGATCGCCAACGGCCAGTCGGTGGCGGTGCGCGACCGCAAGCTGAACACCCAGGACATCACCCCGC TGTCGCAGACGCCCCTGCGCTTCCTTCTGGCGGAGCGGATCGACCTTGCCACCGACCAGCATGTGGCGGGCGTGTTCCAG GACGACAAATTCATCTCGGTGATCATCCAGGAGCAGGTGCCCATGATGGGCACGTATCGCCTGCTGATCCTGTTCGATGC CAAGACCTCGGCCCTGAAGCAATGGATCATCACCGATCCGCAGGGCTATGATACCCAGGTGACCCTCAGCAACGTGCAGG TGAACAAGAAGCCCGACCCGAAGCTGTTCGTGATCAATTTCGAGCGGATGCTTCAGTAA
Upstream 100 bases:
>100_bases CCCACCCTGCGCCCGGTACCTGCAACGGCATTCGCCAGAAGAAGACCATTCGCCGACGGCTAGGCCACAGGATCGCCATA CGCCTTGGGCAGGGTCTATA
Downstream 100 bases:
>100_bases CAGAGGCTGCGGGGCCGGTTCACCGCTCACATCTGCGTGCGGGCGCGGATGGCGGCGGACAGGGTGCCCTCGTCCAGATA ATCGAGCTCGCCGCCCACCG
Product: outer membrane lipoprotein carrier protein LolA
Products: NA
Alternate protein names: Outer Membrane Lipoprotein Carrier Protein; Twin-Arginine Translocation Pathway Signal; Outer-Membrane Lipoprotein Carrier Protein; Outer Membrane Lipoprotein-Sorting Protein; Outer Membrane Lipoproteins Carrier Protein; Outer-Membrane Lipoproteins Carrier Protein; Signal Peptide; LolA Family Protein; Outer Membrane Lipoprotein Carrier Protein Lola; LolA Family Outer Membrane Lipoprotein Carrier Protein; LolA Type Protein; Outer Membrane Lipoprotein Carrier Protein LolA Family
Number of amino acids: Translated: 312; Mature: 312
Protein sequence:
>312_residues MILCTSDQPAPGRGRNQFQGYALPVPNAARQRPSMMPSRPPASSRVRRCLSPLARSLAGAGCLAATLAATLAVLSGTAAS AQTLQPPGDLMKPQQRHSAPNAAPLPPQKPGAPSFTVAQAAGPQVQAAAANPDGRAPRATVDRVTNYYNSVQSLTGNFTQ IDPDGTRRTGDVYMQKPGRVRFEYDAPSPVELIANGQSVAVRDRKLNTQDITPLSQTPLRFLLAERIDLATDQHVAGVFQ DDKFISVIIQEQVPMMGTYRLLILFDAKTSALKQWIITDPQGYDTQVTLSNVQVNKKPDPKLFVINFERMLQ
Sequences:
>Translated_312_residues MILCTSDQPAPGRGRNQFQGYALPVPNAARQRPSMMPSRPPASSRVRRCLSPLARSLAGAGCLAATLAATLAVLSGTAAS AQTLQPPGDLMKPQQRHSAPNAAPLPPQKPGAPSFTVAQAAGPQVQAAAANPDGRAPRATVDRVTNYYNSVQSLTGNFTQ IDPDGTRRTGDVYMQKPGRVRFEYDAPSPVELIANGQSVAVRDRKLNTQDITPLSQTPLRFLLAERIDLATDQHVAGVFQ DDKFISVIIQEQVPMMGTYRLLILFDAKTSALKQWIITDPQGYDTQVTLSNVQVNKKPDPKLFVINFERMLQ >Mature_312_residues MILCTSDQPAPGRGRNQFQGYALPVPNAARQRPSMMPSRPPASSRVRRCLSPLARSLAGAGCLAATLAATLAVLSGTAAS AQTLQPPGDLMKPQQRHSAPNAAPLPPQKPGAPSFTVAQAAGPQVQAAAANPDGRAPRATVDRVTNYYNSVQSLTGNFTQ IDPDGTRRTGDVYMQKPGRVRFEYDAPSPVELIANGQSVAVRDRKLNTQDITPLSQTPLRFLLAERIDLATDQHVAGVFQ DDKFISVIIQEQVPMMGTYRLLILFDAKTSALKQWIITDPQGYDTQVTLSNVQVNKKPDPKLFVINFERMLQ
Specific function: Unknown
COG id: COG2834
COG function: function code M; Outer membrane lipoprotein-sorting protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33812; Mature: 33812
Theoretical pI: Translated: 10.21; Mature: 10.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILCTSDQPAPGRGRNQFQGYALPVPNAARQRPSMMPSRPPASSRVRRCLSPLARSLAGA CEEECCCCCCCCCCCCCCCCEEECCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCC GCLAATLAATLAVLSGTAASAQTLQPPGDLMKPQQRHSAPNAAPLPPQKPGAPSFTVAQA HHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCHHHHCCCCCCCCCCCCCCCCCEEEECC AGPQVQAAAANPDGRAPRATVDRVTNYYNSVQSLTGNFTQIDPDGTRRTGDVYMQKPGRV CCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCEEEECCCCE RFEYDAPSPVELIANGQSVAVRDRKLNTQDITPLSQTPLRFLLAERIDLATDQHVAGVFQ EEEECCCCCCEEEECCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHEEEC DDKFISVIIQEQVPMMGTYRLLILFDAKTSALKQWIITDPQGYDTQVTLSNVQVNKKPDP CCCEEEEEEHHCCCCCEEEEEEEEECCCHHHHHHHEEECCCCCCCEEEEEEEEECCCCCC KLFVINFERMLQ CEEEEEHHHHCC >Mature Secondary Structure MILCTSDQPAPGRGRNQFQGYALPVPNAARQRPSMMPSRPPASSRVRRCLSPLARSLAGA CEEECCCCCCCCCCCCCCCCEEECCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCC GCLAATLAATLAVLSGTAASAQTLQPPGDLMKPQQRHSAPNAAPLPPQKPGAPSFTVAQA HHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCHHHHCCCCCCCCCCCCCCCCCEEEECC AGPQVQAAAANPDGRAPRATVDRVTNYYNSVQSLTGNFTQIDPDGTRRTGDVYMQKPGRV CCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCEEEECCCCE RFEYDAPSPVELIANGQSVAVRDRKLNTQDITPLSQTPLRFLLAERIDLATDQHVAGVFQ EEEECCCCCCEEEECCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHEEEC DDKFISVIIQEQVPMMGTYRLLILFDAKTSALKQWIITDPQGYDTQVTLSNVQVNKKPDP CCCEEEEEEHHCCCCCEEEEEEEEECCCHHHHHHHEEECCCCCCCEEEEEEEEECCCCCC KLFVINFERMLQ CEEEEEHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA