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The map label for this gene is yhgI [C]

Identifier: 154245767

GI number: 154245767

Start: 2049882

End: 2050442

Strand: Reverse

Name: yhgI [C]

Synonym: Xaut_1823

Alternate gene names: 154245767

Gene position: 2050442-2049882 (Counterclockwise)

Preceding gene: 154245768

Following gene: 154245766

Centisome position: 38.62

GC content: 64.53

Gene sequence:

>561_bases
ATGTTCATTCAGACCGAAACCACACCGAATCCGGCGACCCTGAAGTTCCTGCCCGGCCGTTCGGTGCTGGGGGAAGGCAC
CCTCGACCTGCGCTCCCACGACGACGCCGACCTCTCCCCCCTCGCCCAGCGCCTGTTCGACGTGCGCGGCGTGGCAGCGG
TGTTCCTCGGGTCGGATTTCGTCACCGTCACCAAGGCGGAGGCGGAGTGGCCGCAGATCAAGCCGGCCATCCTCGGCGCG
ATCATGGAACACTTCATGTCCGGCGCCCCGGTGCTGTCCGATGGCGTGAAACCCGAAGTCGCCGATGCTGACGAGTTCTA
CGAGGCGAAGGACGCCGAAATCGTCGCCACCATCAAGGAGCTTCTGGACACGCGGGTGCGCCCGGCGGTGGCTAATGACG
GCGGCGACATCACCTTCCGCGGCTTCAAGGACGGTATCGTGTTCCTGAACATGAAGGGCTCGTGCTCCGGCTGCCCCTCG
TCCACGGCGACGCTGAAGAACGGAATCGAGAACCTTCTCAAGCATTTCGTGCCGGAGGTGACCGAGGTTCAGGCGGTCTG
A

Upstream 100 bases:

>100_bases
CAGGACCTTTCCCGAGGCGCCCTTTGCGTTTGGCGGGTGAGCCCCTATCTTCAAGAAAACGCGCAGGTTCGCCTGCTGCT
TTTCTTTTGAGGATTGAGCC

Downstream 100 bases:

>100_bases
GGGTCGCTCCCCATTAACCTTTCTGTAAGGTGAGCGTTCGGGGTCGCTTCCCCTCGCCACGGTTTCGGTTGATCGTGGCG
AGGAGTGGGGCACCCGGTTT

Product: scaffold protein Nfu/NifU

Products: NA

Alternate protein names: NifU Domain Protein; NifU Domain-Containing Protein; Nitrogen-Fixing NifU Domain Protein; Nitrogen-Fixing NifU-Like; Nitrogen Fixation Protein; NifU-Like Domain Protein; NifU Related Protein; NifU-Like Protein; NifU-Like Domain-Containing Protein; NifU Protein; Nitrogen-Fixing NifU-Like Protein; Nitrogen-Fixing NifU Domain-Containing Protein; Scaffold Protein Nfu/Nifu; NifU Family Protein; Thioredoxin-Like Protein; Nitrogen-Fixing NifU; NifU Iron-Sulphur Cluster Scaffold Protein; Nif System Fes Cluster Assembly Nifu Family Protein; Thioredoxin-Related Protein; Thioredoxin-Like Domain Protein; Scaffold Protein Nfu/NifU N Terminal Domain Protein; Nitrogen-Fixing Nifu Domain Protein; Nitrogen-Fixing Protein NifU; Nitrogen Fixing Thioredoxin-Like Protein NifU; Nitrogen-Fixing Protein; NFU1 Iron-Sulfur Cluster Scaffold-Like Protein; Fe-S Cluster Assembly Protein NFU; Nifu Protein; NifU Domain Containing Protein; HIRA-Interacting; Nitrogen-Fixing NifU C-Terminal; Scaffold Protein Nfu/NifU-Like Protein; Scaffold Protein Nfu/NifU N Terminal; NitrogeN-Fixing Nifu Domain Protein; Thioredoxin

Number of amino acids: Translated: 186; Mature: 186

Protein sequence:

>186_residues
MFIQTETTPNPATLKFLPGRSVLGEGTLDLRSHDDADLSPLAQRLFDVRGVAAVFLGSDFVTVTKAEAEWPQIKPAILGA
IMEHFMSGAPVLSDGVKPEVADADEFYEAKDAEIVATIKELLDTRVRPAVANDGGDITFRGFKDGIVFLNMKGSCSGCPS
STATLKNGIENLLKHFVPEVTEVQAV

Sequences:

>Translated_186_residues
MFIQTETTPNPATLKFLPGRSVLGEGTLDLRSHDDADLSPLAQRLFDVRGVAAVFLGSDFVTVTKAEAEWPQIKPAILGA
IMEHFMSGAPVLSDGVKPEVADADEFYEAKDAEIVATIKELLDTRVRPAVANDGGDITFRGFKDGIVFLNMKGSCSGCPS
STATLKNGIENLLKHFVPEVTEVQAV
>Mature_186_residues
MFIQTETTPNPATLKFLPGRSVLGEGTLDLRSHDDADLSPLAQRLFDVRGVAAVFLGSDFVTVTKAEAEWPQIKPAILGA
IMEHFMSGAPVLSDGVKPEVADADEFYEAKDAEIVATIKELLDTRVRPAVANDGGDITFRGFKDGIVFLNMKGSCSGCPS
STATLKNGIENLLKHFVPEVTEVQAV

Specific function: Unknown

COG id: COG0694

COG function: function code O; Thioredoxin-like proteins and domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI50593025, Length=188, Percent_Identity=50.531914893617, Blast_Score=191, Evalue=3e-49,
Organism=Homo sapiens, GI50593021, Length=188, Percent_Identity=50.531914893617, Blast_Score=191, Evalue=3e-49,
Organism=Homo sapiens, GI50593023, Length=105, Percent_Identity=50.4761904761905, Blast_Score=112, Evalue=1e-25,
Organism=Homo sapiens, GI50593019, Length=105, Percent_Identity=50.4761904761905, Blast_Score=112, Evalue=1e-25,
Organism=Caenorhabditis elegans, GI17541876, Length=187, Percent_Identity=50.8021390374332, Blast_Score=184, Evalue=2e-47,
Organism=Saccharomyces cerevisiae, GI6322811, Length=204, Percent_Identity=37.7450980392157, Blast_Score=125, Evalue=5e-30,
Organism=Drosophila melanogaster, GI45551492, Length=188, Percent_Identity=54.7872340425532, Blast_Score=195, Evalue=1e-50,
Organism=Drosophila melanogaster, GI24643765, Length=188, Percent_Identity=54.7872340425532, Blast_Score=195, Evalue=1e-50,
Organism=Drosophila melanogaster, GI45556188, Length=188, Percent_Identity=54.7872340425532, Blast_Score=195, Evalue=1e-50,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19964; Mature: 19964

Theoretical pI: Translated: 4.47; Mature: 4.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFIQTETTPNPATLKFLPGRSVLGEGTLDLRSHDDADLSPLAQRLFDVRGVAAVFLGSDF
CEECCCCCCCCCEEEEECCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCE
VTVTKAEAEWPQIKPAILGAIMEHFMSGAPVLSDGVKPEVADADEFYEAKDAEIVATIKE
EEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHH
LLDTRVRPAVANDGGDITFRGFKDGIVFLNMKGSCSGCPSSTATLKNGIENLLKHFVPEV
HHHHHCCCCCCCCCCCEEEEECCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCH
TEVQAV
HHHCCC
>Mature Secondary Structure
MFIQTETTPNPATLKFLPGRSVLGEGTLDLRSHDDADLSPLAQRLFDVRGVAAVFLGSDF
CEECCCCCCCCCEEEEECCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCE
VTVTKAEAEWPQIKPAILGAIMEHFMSGAPVLSDGVKPEVADADEFYEAKDAEIVATIKE
EEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHH
LLDTRVRPAVANDGGDITFRGFKDGIVFLNMKGSCSGCPSSTATLKNGIENLLKHFVPEV
HHHHHCCCCCCCCCCCEEEEECCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCH
TEVQAV
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA