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The map label for this gene is 154245736

Identifier: 154245736

GI number: 154245736

Start: 2021368

End: 2021766

Strand: Reverse

Name: 154245736

Synonym: Xaut_1792

Alternate gene names: NA

Gene position: 2021766-2021368 (Counterclockwise)

Preceding gene: 154245737

Following gene: 154245729

Centisome position: 38.08

GC content: 66.17

Gene sequence:

>399_bases
ATGATTCGCGCCGCATTCGTTTCCGCCCTGCTCCTGGCCGCCGCCACCGGCTCCGCGCTCGCGGACCCGGACGTGGCCAA
GGGCGAGACCACCTTCAAGAAGTGCATGGCGTGCCACGCCATCGGCCCCGACGCCAAGGTGAAGGTCGGCCCGCCCCTGA
ACGGGATCGTCGGCGCCAAGTGGGCCCACTTCGAGGGCTATGCCTATTCCGCCGACATCAAGGACGGCGCCGCCGCCGGC
AAGGTGTGGGACGAGGCCACCCTGGACAATTACATCAGCAACCCCAAGGTGCTCGCCCCCAAGGGCAAAATGGCCTTCGC
CGGCGTCAAGAACGACGACGAGCGCAAGGACCTCATCGCCTTCCTCGCCCAGTTCAATGCCGACGGCAGCAAGAAGTAA

Upstream 100 bases:

>100_bases
CGGCACGGGCGAGATTCTCGTCCTTCAGTGAGTGGCCAAAAGGAGGTGGGCCGGGACGGCCCGCCCTCCGTAGACACAAG
ATCAACGAGAGGAACACCTG

Downstream 100 bases:

>100_bases
TGGGCGAGGGCAGGACCGTTCGGCACTGCTCCGCAGAGGCGGCGGCGCCTCCATGAAGCGGGGCGCACGAAGCCGCACCA
TCGTCATGCCCCGGCTTGAC

Product: cytochrome c class I

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 132; Mature: 132

Protein sequence:

>132_residues
MIRAAFVSALLLAAATGSALADPDVAKGETTFKKCMACHAIGPDAKVKVGPPLNGIVGAKWAHFEGYAYSADIKDGAAAG
KVWDEATLDNYISNPKVLAPKGKMAFAGVKNDDERKDLIAFLAQFNADGSKK

Sequences:

>Translated_132_residues
MIRAAFVSALLLAAATGSALADPDVAKGETTFKKCMACHAIGPDAKVKVGPPLNGIVGAKWAHFEGYAYSADIKDGAAAG
KVWDEATLDNYISNPKVLAPKGKMAFAGVKNDDERKDLIAFLAQFNADGSKK
>Mature_132_residues
MIRAAFVSALLLAAATGSALADPDVAKGETTFKKCMACHAIGPDAKVKVGPPLNGIVGAKWAHFEGYAYSADIKDGAAAG
KVWDEATLDNYISNPKVLAPKGKMAFAGVKNDDERKDLIAFLAQFNADGSKK

Specific function: Cytochrome c2 is found mainly in purple, non-sulfur, photosynthetic bacteria where it functions as the electron donor to the oxidized bacteriochlorophyll in the photophosphorylation pathway. However, it may also have a role in the respiratory chain and is

COG id: COG3474

COG function: function code C; Cytochrome c2

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 cytochrome c domain [H]

Homologues:

Organism=Homo sapiens, GI11128019, Length=102, Percent_Identity=43.1372549019608, Blast_Score=83, Evalue=7e-17,
Organism=Caenorhabditis elegans, GI17566554, Length=110, Percent_Identity=41.8181818181818, Blast_Score=86, Evalue=5e-18,
Organism=Caenorhabditis elegans, GI17539604, Length=100, Percent_Identity=41, Blast_Score=76, Evalue=4e-15,
Organism=Saccharomyces cerevisiae, GI6322508, Length=100, Percent_Identity=42, Blast_Score=82, Evalue=2e-17,
Organism=Saccharomyces cerevisiae, GI6320796, Length=100, Percent_Identity=41, Blast_Score=80, Evalue=1e-16,
Organism=Drosophila melanogaster, GI17137228, Length=100, Percent_Identity=45, Blast_Score=83, Evalue=4e-17,
Organism=Drosophila melanogaster, GI17137204, Length=105, Percent_Identity=43.8095238095238, Blast_Score=80, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002327
- InterPro:   IPR009056
- InterPro:   IPR003088 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 13799; Mature: 13799

Theoretical pI: Translated: 8.70; Mature: 8.70

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRAAFVSALLLAAATGSALADPDVAKGETTFKKCMACHAIGPDAKVKVGPPLNGIVGAK
CCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCC
WAHFEGYAYSADIKDGAAAGKVWDEATLDNYISNPKVLAPKGKMAFAGVKNDDERKDLIA
EECCCCEEEECCCCCCCCCCCCCCHHHHHHHHCCCEEECCCCCEEEECCCCCCHHHHHHH
FLAQFNADGSKK
HHHHHCCCCCCC
>Mature Secondary Structure
MIRAAFVSALLLAAATGSALADPDVAKGETTFKKCMACHAIGPDAKVKVGPPLNGIVGAK
CCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCC
WAHFEGYAYSADIKDGAAAGKVWDEATLDNYISNPKVLAPKGKMAFAGVKNDDERKDLIA
EECCCCEEEECCCCCCCCCCCCCCHHHHHHHHCCCEEECCCCCEEEECCCCCCHHHHHHH
FLAQFNADGSKK
HHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 174109 [H]