Click here to switch to the map view.

The map label for this gene is nfrB

Identifier: 154245678

GI number: 154245678

Start: 1948492

End: 1950633

Strand: Reverse

Name: nfrB

Synonym: Xaut_1734

Alternate gene names: 154245678

Gene position: 1950633-1948492 (Counterclockwise)

Preceding gene: 154245679

Following gene: 154245677

Centisome position: 36.74

GC content: 67.41

Gene sequence:

>2142_bases
ATGTCCACCGCGCTGTCCCTCGACGGGCTGTCCCTTTATTGGCCATTCCTCCTGGCCGATTACATCCGCGTGGTGGAATA
CGCTGCGGCGGTGGTGGCGGTGATCATCCTGATCTCCTCCCTCGACGACCTGTTCGTCGATGCCTGGTACTGGGGGCGGC
GGATCTACCGCCGCTTCGTCATCGAGCCGTTCATCCGCCCGCTCACCCCTGCTGCCCTCTACCAGCGGGACGAGCAGCCG
CTCGCCATCATGATTCCCGCCTGGCTCGAATCCGGCGTGATCGCGGCCATGATCGAGAACATGGTGAGCGTGCTCGACTA
CCGGCGCTACGTGATCTTCGTGGGTACCTATCCCAACGATCCCGACACCATCGCCGAGGTGGAGCGCATGCGCCGGCGCT
ACAAGCAGCTGGTGCGGGTGGAGGTGAAGAATCCCGGACCCACCAACAAGGCGGACTGCCTCAACGCGGTGGTGCGCGCC
ATCTTCCAGCACGAGGAGATGACCGGCACCGAGTTCGCCGGCCTCGTGCTGCACGACGCCGAGGACGTGCTGCACCCCCT
CGAGCTGCGTTTCTTCAACTATCTCCTGCCGCGCAAGGACCTGATCCAGATCCCGGTCCTGTCGCTGGAGCGCCACTGGT
CGGAGCTGGTGGCCGGCATCTACATGGACGAGTTCGCCGAGTGGCACGCCAAGGACCTGGTGGTGCGCGAGAGCATCGCC
GGCTCCGTGCCCTCCGCCGGGGTGGGCACCTGCTTCTCGCGCAAGGCCATGCTGCATCTTCTCGCCGACGGCGATGGCGA
GGTCTTCAACACCGGCAGCCTCACCGAGGATTATGATATCAGCGCCCGCCTGGCCGAGGCGCGCATGCAGTCCATCATCG
CCCGCCTGCCGGTGGACTACCGGGTGACGCGCGAGACTTTCTTCGGCTTCGGGTCGCAGATCGAGCACGTCATCCGCATG
CCCCTGTGCGTGCGCGAATTCTTCCCCGACACCTTCCGCACCTCCTATCGGCAGAAGGCGCGCTGGGGTCTGGGCATCGC
GTTCCAGGGCTGGGGTTCCATGGGCTGGCGCGGCAGCCTTGCCACCAAGTATTTCCTGTTCCGCGACCGCAAGGGCATCG
TCACCTCCATCGTGGCGGTGCTGGCCTATGTGGTGGCGGCGCACTTCCTCATCTTCCTTGCCGCCGAAAAGCTCGGCTGG
CTGCCGGCCCGCTACCCGTCCATCTTCGCCACCGAAGGCTGGCTGCTGGCGGTGCTGACCGCCAATGCGGTGGCCTTCGC
GCTGCGGCTGATCCAGCGCTTCTATTTCGTCGCCCGCGTCTATGGCTGGGAGCAGGGGCTCATGTCCGTGCCGCGGGTGG
TGATGGGCAATTTCGTCAATTTCGCTGCCACCGTGCGGGCGTGGCGGCTGTTCCTTGCCAACGCCCTGTTCGGTCGCCGT
ATCGTCTGGGACAAGACGATGCACGACTTTCCCGACCAGGCGGAGCTGGGCCAGCAGCGCCAGCGCCTCGGCGAGCTGCT
GCTCACCTGGCAGGCGGTGCTGCCGGAGCATGTGGATGCGGCGCTGGCGGCGCAGGACGAGCGCCAGCAGCCCCTCGGCC
GCATCCTCGTCTCCCGCGGCTGGCTCGATGAGGAGACGCTGGCCGAGGCCATCGCCTTCCAGTCCGGCCTGCCGCGCACC
CATGTGACCGAGCAGATGGTGCGCCAGTTCCACGACCTTTTGCCCCTCGACCTGATGGTGCGCCGGCGGCTGCTGCCCGT
GGGCCGCGACGAGACCGGTCGGCTGGTGGTGGCGGTGCCCTCTCCCCTTGGGGACAAGGCGCTCGAGGATGTGCGCGAGG
CGGTGGGCGACGTGCCGGTCCAGCGCATCGCCCGCGAGAGCGAGATCAACGGCGGCCTGCGCCTCTTGCGCGGCGTCACC
CCCGGCATCGAGGGCCACCGGGCGCCGCCGCTTTTGGGCGAGCTGCTGCTGGAAAAGGGCCTGATGCAGCGCGAGGCGTT
CGAGGCGGCCATGGAGCTTTACCGTCCCGACGTGGACGGGCGCATCGGCGAATATCTCGTGCGCTGCGGCATCGTGAAGG
AAGAAGCCATCGAGGCCACGGTGCGCGAACAGGAGCGCCGGCTCGCCGTCGCCGCCCTGTGA

Upstream 100 bases:

>100_bases
CTGCCGCTCGGCATCGGCGCCGCCGCCCTGTTCTTCCTGCTGCTGATCCGCGCCTCCTACGTGCGCCGTCGCGGTAGCTG
ACGCCGGAAAGATCACCGCC

Downstream 100 bases:

>100_bases
GCCGGCGCGCCGGCCTGTTTCAGCCAGCCTGGGCCGGCGCCAGTCGGCGCAAGCCATGACCGGGCTGAGCCGCCGCGCTG
CGCTCGTCCTCGGCGCCACG

Product: bacteriophage N4 adsorption protein B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 713; Mature: 712

Protein sequence:

>713_residues
MSTALSLDGLSLYWPFLLADYIRVVEYAAAVVAVIILISSLDDLFVDAWYWGRRIYRRFVIEPFIRPLTPAALYQRDEQP
LAIMIPAWLESGVIAAMIENMVSVLDYRRYVIFVGTYPNDPDTIAEVERMRRRYKQLVRVEVKNPGPTNKADCLNAVVRA
IFQHEEMTGTEFAGLVLHDAEDVLHPLELRFFNYLLPRKDLIQIPVLSLERHWSELVAGIYMDEFAEWHAKDLVVRESIA
GSVPSAGVGTCFSRKAMLHLLADGDGEVFNTGSLTEDYDISARLAEARMQSIIARLPVDYRVTRETFFGFGSQIEHVIRM
PLCVREFFPDTFRTSYRQKARWGLGIAFQGWGSMGWRGSLATKYFLFRDRKGIVTSIVAVLAYVVAAHFLIFLAAEKLGW
LPARYPSIFATEGWLLAVLTANAVAFALRLIQRFYFVARVYGWEQGLMSVPRVVMGNFVNFAATVRAWRLFLANALFGRR
IVWDKTMHDFPDQAELGQQRQRLGELLLTWQAVLPEHVDAALAAQDERQQPLGRILVSRGWLDEETLAEAIAFQSGLPRT
HVTEQMVRQFHDLLPLDLMVRRRLLPVGRDETGRLVVAVPSPLGDKALEDVREAVGDVPVQRIARESEINGGLRLLRGVT
PGIEGHRAPPLLGELLLEKGLMQREAFEAAMELYRPDVDGRIGEYLVRCGIVKEEAIEATVREQERRLAVAAL

Sequences:

>Translated_713_residues
MSTALSLDGLSLYWPFLLADYIRVVEYAAAVVAVIILISSLDDLFVDAWYWGRRIYRRFVIEPFIRPLTPAALYQRDEQP
LAIMIPAWLESGVIAAMIENMVSVLDYRRYVIFVGTYPNDPDTIAEVERMRRRYKQLVRVEVKNPGPTNKADCLNAVVRA
IFQHEEMTGTEFAGLVLHDAEDVLHPLELRFFNYLLPRKDLIQIPVLSLERHWSELVAGIYMDEFAEWHAKDLVVRESIA
GSVPSAGVGTCFSRKAMLHLLADGDGEVFNTGSLTEDYDISARLAEARMQSIIARLPVDYRVTRETFFGFGSQIEHVIRM
PLCVREFFPDTFRTSYRQKARWGLGIAFQGWGSMGWRGSLATKYFLFRDRKGIVTSIVAVLAYVVAAHFLIFLAAEKLGW
LPARYPSIFATEGWLLAVLTANAVAFALRLIQRFYFVARVYGWEQGLMSVPRVVMGNFVNFAATVRAWRLFLANALFGRR
IVWDKTMHDFPDQAELGQQRQRLGELLLTWQAVLPEHVDAALAAQDERQQPLGRILVSRGWLDEETLAEAIAFQSGLPRT
HVTEQMVRQFHDLLPLDLMVRRRLLPVGRDETGRLVVAVPSPLGDKALEDVREAVGDVPVQRIARESEINGGLRLLRGVT
PGIEGHRAPPLLGELLLEKGLMQREAFEAAMELYRPDVDGRIGEYLVRCGIVKEEAIEATVREQERRLAVAAL
>Mature_712_residues
STALSLDGLSLYWPFLLADYIRVVEYAAAVVAVIILISSLDDLFVDAWYWGRRIYRRFVIEPFIRPLTPAALYQRDEQPL
AIMIPAWLESGVIAAMIENMVSVLDYRRYVIFVGTYPNDPDTIAEVERMRRRYKQLVRVEVKNPGPTNKADCLNAVVRAI
FQHEEMTGTEFAGLVLHDAEDVLHPLELRFFNYLLPRKDLIQIPVLSLERHWSELVAGIYMDEFAEWHAKDLVVRESIAG
SVPSAGVGTCFSRKAMLHLLADGDGEVFNTGSLTEDYDISARLAEARMQSIIARLPVDYRVTRETFFGFGSQIEHVIRMP
LCVREFFPDTFRTSYRQKARWGLGIAFQGWGSMGWRGSLATKYFLFRDRKGIVTSIVAVLAYVVAAHFLIFLAAEKLGWL
PARYPSIFATEGWLLAVLTANAVAFALRLIQRFYFVARVYGWEQGLMSVPRVVMGNFVNFAATVRAWRLFLANALFGRRI
VWDKTMHDFPDQAELGQQRQRLGELLLTWQAVLPEHVDAALAAQDERQQPLGRILVSRGWLDEETLAEAIAFQSGLPRTH
VTEQMVRQFHDLLPLDLMVRRRLLPVGRDETGRLVVAVPSPLGDKALEDVREAVGDVPVQRIARESEINGGLRLLRGVTP
GIEGHRAPPLLGELLLEKGLMQREAFEAAMELYRPDVDGRIGEYLVRCGIVKEEAIEATVREQERRLAVAAL

Specific function: Required for bacteriophage N4 adsorption. May be a component of the phage receptor [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786781, Length=696, Percent_Identity=41.0919540229885, Blast_Score=461, Evalue=1e-131,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007831 [H]

Pfam domain/function: PF05157 GSPII_E_N [H]

EC number: NA

Molecular weight: Translated: 80844; Mature: 80713

Theoretical pI: Translated: 6.47; Mature: 6.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTALSLDGLSLYWPFLLADYIRVVEYAAAVVAVIILISSLDDLFVDAWYWGRRIYRRFV
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IEPFIRPLTPAALYQRDEQPLAIMIPAWLESGVIAAMIENMVSVLDYRRYVIFVGTYPND
HHHHHHCCCHHHHHCCCCCCEEEEEHHHHHCCHHHHHHHHHHHHHHCCEEEEEEECCCCC
PDTIAEVERMRRRYKQLVRVEVKNPGPTNKADCLNAVVRAIFQHEEMTGTEFAGLVLHDA
CHHHHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHEEECH
EDVLHPLELRFFNYLLPRKDLIQIPVLSLERHWSELVAGIYMDEFAEWHAKDLVVRESIA
HHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GSVPSAGVGTCFSRKAMLHLLADGDGEVFNTGSLTEDYDISARLAEARMQSIIARLPVDY
CCCCCCCHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCC
RVTRETFFGFGSQIEHVIRMPLCVREFFPDTFRTSYRQKARWGLGIAFQGWGSMGWRGSL
EEHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCH
ATKYFLFRDRKGIVTSIVAVLAYVVAAHFLIFLAAEKLGWLPARYPSIFATEGWLLAVLT
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCHHHHHHH
ANAVAFALRLIQRFYFVARVYGWEQGLMSVPRVVMGNFVNFAATVRAWRLFLANALFGRR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
IVWDKTMHDFPDQAELGQQRQRLGELLLTWQAVLPEHVDAALAAQDERQQPLGRILVSRG
HHCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCHHHHHHHHCC
WLDEETLAEAIAFQSGLPRTHVTEQMVRQFHDLLPLDLMVRRRLLPVGRDETGRLVVAVP
CCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCEEEEECC
SPLGDKALEDVREAVGDVPVQRIARESEINGGLRLLRGVTPGIEGHRAPPLLGELLLEKG
CCCCHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH
LMQREAFEAAMELYRPDVDGRIGEYLVRCGIVKEEAIEATVREQERRLAVAAL
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
STALSLDGLSLYWPFLLADYIRVVEYAAAVVAVIILISSLDDLFVDAWYWGRRIYRRFV
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IEPFIRPLTPAALYQRDEQPLAIMIPAWLESGVIAAMIENMVSVLDYRRYVIFVGTYPND
HHHHHHCCCHHHHHCCCCCCEEEEEHHHHHCCHHHHHHHHHHHHHHCCEEEEEEECCCCC
PDTIAEVERMRRRYKQLVRVEVKNPGPTNKADCLNAVVRAIFQHEEMTGTEFAGLVLHDA
CHHHHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHEEECH
EDVLHPLELRFFNYLLPRKDLIQIPVLSLERHWSELVAGIYMDEFAEWHAKDLVVRESIA
HHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GSVPSAGVGTCFSRKAMLHLLADGDGEVFNTGSLTEDYDISARLAEARMQSIIARLPVDY
CCCCCCCHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCC
RVTRETFFGFGSQIEHVIRMPLCVREFFPDTFRTSYRQKARWGLGIAFQGWGSMGWRGSL
EEHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCH
ATKYFLFRDRKGIVTSIVAVLAYVVAAHFLIFLAAEKLGWLPARYPSIFATEGWLLAVLT
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCHHHHHHH
ANAVAFALRLIQRFYFVARVYGWEQGLMSVPRVVMGNFVNFAATVRAWRLFLANALFGRR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
IVWDKTMHDFPDQAELGQQRQRLGELLLTWQAVLPEHVDAALAAQDERQQPLGRILVSRG
HHCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCHHHHHHHHCC
WLDEETLAEAIAFQSGLPRTHVTEQMVRQFHDLLPLDLMVRRRLLPVGRDETGRLVVAVP
CCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCEEEEECC
SPLGDKALEDVREAVGDVPVQRIARESEINGGLRLLRGVTPGIEGHRAPPLLGELLLEKG
CCCCHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH
LMQREAFEAAMELYRPDVDGRIGEYLVRCGIVKEEAIEATVREQERRLAVAAL
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]