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The map label for this gene is 154245675

Identifier: 154245675

GI number: 154245675

Start: 1945004

End: 1945522

Strand: Reverse

Name: 154245675

Synonym: Xaut_1731

Alternate gene names: NA

Gene position: 1945522-1945004 (Counterclockwise)

Preceding gene: 154245677

Following gene: 154245669

Centisome position: 36.65

GC content: 64.55

Gene sequence:

>519_bases
ATGCTCAACTGGCATGGCGCCTTCAGGGGCGCCGCTTCCGTTTGCACCATCGTCGTTTGCATGGCCGCGTTCACCGTCCC
GGCCGTGGCGGCGCCACCGCCCTCCGGTCGGGTCCAGATCGCCAACGCGAACAGCGATCTGTGCCTGAGCCCTGCCGGCG
GGACCGGCAATCAGAACGAGCAGACCGTTCAGTACCATTGCGATACCCACCCCTCGCGAGCCTGGGTCATCGAGCCGGTC
GAGGGAAACATCGTCAAGATCCGGAACGTCAACAGCAATCTCTGCCTGACGGTCGCGGGCGGGAACAGCGATCGCAATAC
GCCTTCGGTGCAATATAGCTGCGACGACCACCCGTCCCGCCGCTGGCTCTACGCACCGTTTGACGGCGGCCTGTTCCGGC
TGGTCAATGTCAACAGCGGGCTGTGCCTGACCATCGCGGGCGGATCGACGGGGCTCAACCAGACCGCGGTGCAATTTCCC
TGTGACGAGCACCCGTCCCGCTTCTTCCGGTTGAAGTAG

Upstream 100 bases:

>100_bases
GATCGTTTTGTCCCTCAAACGGCGGATGCGCCCTTGCCGGTTGCCGTGTTTAGAAGACACCCATGGGGGTCATTCTTGGC
TGAGCAGAAGGAATGGCACG

Downstream 100 bases:

>100_bases
CCGGGCGCGGCCGCTTTGCCAGCGTCATGGCGGGGCGTGTCCCGGACGTCGGCTGTTGCCGACTTCCGCCTCCGAGAAGC
GGAACCCGCAAACATGCGGG

Product: Ricin B lectin

Products: NA

Alternate protein names: Lectin Repeat-Containing Protein; Subtilisin-Like Serine Protease

Number of amino acids: Translated: 172; Mature: 172

Protein sequence:

>172_residues
MLNWHGAFRGAASVCTIVVCMAAFTVPAVAAPPPSGRVQIANANSDLCLSPAGGTGNQNEQTVQYHCDTHPSRAWVIEPV
EGNIVKIRNVNSNLCLTVAGGNSDRNTPSVQYSCDDHPSRRWLYAPFDGGLFRLVNVNSGLCLTIAGGSTGLNQTAVQFP
CDEHPSRFFRLK

Sequences:

>Translated_172_residues
MLNWHGAFRGAASVCTIVVCMAAFTVPAVAAPPPSGRVQIANANSDLCLSPAGGTGNQNEQTVQYHCDTHPSRAWVIEPV
EGNIVKIRNVNSNLCLTVAGGNSDRNTPSVQYSCDDHPSRRWLYAPFDGGLFRLVNVNSGLCLTIAGGSTGLNQTAVQFP
CDEHPSRFFRLK
>Mature_172_residues
MLNWHGAFRGAASVCTIVVCMAAFTVPAVAAPPPSGRVQIANANSDLCLSPAGGTGNQNEQTVQYHCDTHPSRAWVIEPV
EGNIVKIRNVNSNLCLTVAGGNSDRNTPSVQYSCDDHPSRRWLYAPFDGGLFRLVNVNSGLCLTIAGGSTGLNQTAVQFP
CDEHPSRFFRLK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18429; Mature: 18429

Theoretical pI: Translated: 7.73; Mature: 7.73

Prosite motif: PS50231 RICIN_B_LECTIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.7 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
4.7 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNWHGAFRGAASVCTIVVCMAAFTVPAVAAPPPSGRVQIANANSDLCLSPAGGTGNQNE
CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCEEEECCCCCCCCCC
QTVQYHCDTHPSRAWVIEPVEGNIVKIRNVNSNLCLTVAGGNSDRNTPSVQYSCDDHPSR
EEEEEEECCCCCCEEEEEECCCCEEEEEECCCCEEEEEECCCCCCCCCEEEEECCCCCCC
RWLYAPFDGGLFRLVNVNSGLCLTIAGGSTGLNQTAVQFPCDEHPSRFFRLK
EEEEEECCCCEEEEEECCCCEEEEEECCCCCCCCEEEECCCCCCCCEEEECC
>Mature Secondary Structure
MLNWHGAFRGAASVCTIVVCMAAFTVPAVAAPPPSGRVQIANANSDLCLSPAGGTGNQNE
CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCEEEECCCCCCCCCC
QTVQYHCDTHPSRAWVIEPVEGNIVKIRNVNSNLCLTVAGGNSDRNTPSVQYSCDDHPSR
EEEEEEECCCCCCEEEEEECCCCEEEEEECCCCEEEEEECCCCCCCCCEEEEECCCCCCC
RWLYAPFDGGLFRLVNVNSGLCLTIAGGSTGLNQTAVQFPCDEHPSRFFRLK
EEEEEECCCCEEEEEECCCCEEEEEECCCCCCCCEEEECCCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA