Click here to switch to the map view.

The map label for this gene is lemA [H]

Identifier: 154245613

GI number: 154245613

Start: 1887812

End: 1888438

Strand: Direct

Name: lemA [H]

Synonym: Xaut_1669

Alternate gene names: 154245613

Gene position: 1887812-1888438 (Clockwise)

Preceding gene: 154245612

Following gene: 154245614

Centisome position: 35.56

GC content: 63.96

Gene sequence:

>627_bases
ATGATCATCGCGCTCAAGTCCACCGCACTCCAGCATTTCGCCCGGCTGCGGGCGCCGCTCTTCGCCGTACTCGCCGGGCT
GATGCTGGCCGGCTGCGGGATCAACGTGATTCCCACCGAGGAGGAGCGCGCCAAGGCCGCCTGGAGCGAGGTGATGAACC
AGTACCAGCGCCGCTCCGACCTCATTCCCAACCTGGTGGAAACGGTGAAGGGCTATGCCGCCCAGGAGAAGGACGTGCTG
ACATCGGTCATCGAGGCGCGGGCCAAGGCCACCTCGATTCGGGTGGATGCCTCCACCGTCACCGATCCGGCCCAGTTCAA
GCAGTTCCAGGACGCGCAGGCGGGCCTGTCCAGCGCGCTCGGTCGGCTGATCGCAGTGTCGGAAGCCTATCCGGACCTGA
AGTCCAACCAGAACTTCCTGGCCCTGCAATCGCAGATCGAGGGCACCGAGAACCGCATCGCCGTCGCGCGGCGCGACTAT
ATCGAGGCGGTGCGGGTCTATAACACCGAGCTGAAGACCTTCCCGGGCCTGCTGTGGGCGTCAACCTTCTATCGCAGCTA
CCGGCCCATGGAGACCTTCACCATCTCCGAGCAGCAGATGCAGGTGCCCAAGGTAAAGTTCAATTGA

Upstream 100 bases:

>100_bases
TGAACTTAAGGAACGAGACCGCGCTATCCGATCAGATTGCGTTCATTCTGACCGGGCGCGTGCTCTGGTGCCGATGCGCC
GAGACAGGGAAGGGGCCGCC

Downstream 100 bases:

>100_bases
GCTGAGGGAGGCGGCCATGCTCCGCCTGTCCAAACTCGTCCCATCGCCGGCGCCGGTGCTTTTTGCGCTGGTGCTCCTTC
TCGGGGTGCCGGCGCGGGCG

Product: LemA family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 208; Mature: 208

Protein sequence:

>208_residues
MIIALKSTALQHFARLRAPLFAVLAGLMLAGCGINVIPTEEERAKAAWSEVMNQYQRRSDLIPNLVETVKGYAAQEKDVL
TSVIEARAKATSIRVDASTVTDPAQFKQFQDAQAGLSSALGRLIAVSEAYPDLKSNQNFLALQSQIEGTENRIAVARRDY
IEAVRVYNTELKTFPGLLWASTFYRSYRPMETFTISEQQMQVPKVKFN

Sequences:

>Translated_208_residues
MIIALKSTALQHFARLRAPLFAVLAGLMLAGCGINVIPTEEERAKAAWSEVMNQYQRRSDLIPNLVETVKGYAAQEKDVL
TSVIEARAKATSIRVDASTVTDPAQFKQFQDAQAGLSSALGRLIAVSEAYPDLKSNQNFLALQSQIEGTENRIAVARRDY
IEAVRVYNTELKTFPGLLWASTFYRSYRPMETFTISEQQMQVPKVKFN
>Mature_208_residues
MIIALKSTALQHFARLRAPLFAVLAGLMLAGCGINVIPTEEERAKAAWSEVMNQYQRRSDLIPNLVETVKGYAAQEKDVL
TSVIEARAKATSIRVDASTVTDPAQFKQFQDAQAGLSSALGRLIAVSEAYPDLKSNQNFLALQSQIEGTENRIAVARRDY
IEAVRVYNTELKTFPGLLWASTFYRSYRPMETFTISEQQMQVPKVKFN

Specific function: Unknown

COG id: COG1704

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LemA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007156 [H]

Pfam domain/function: PF04011 LemA [H]

EC number: NA

Molecular weight: Translated: 23223; Mature: 23223

Theoretical pI: Translated: 9.31; Mature: 9.31

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIIALKSTALQHFARLRAPLFAVLAGLMLAGCGINVIPTEEERAKAAWSEVMNQYQRRSD
CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC
LIPNLVETVKGYAAQEKDVLTSVIEARAKATSIRVDASTVTDPAQFKQFQDAQAGLSSAL
CCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHEEEECHHHCCCHHHHHHHHHHHHHHHHHH
GRLIAVSEAYPDLKSNQNFLALQSQIEGTENRIAVARRDYIEAVRVYNTELKTFPGLLWA
HHHHHHHHHCCCCCCCCCCEEHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
STFYRSYRPMETFTISEQQMQVPKVKFN
HHHHHHCCCCHHEEECHHHHHCCCCCCC
>Mature Secondary Structure
MIIALKSTALQHFARLRAPLFAVLAGLMLAGCGINVIPTEEERAKAAWSEVMNQYQRRSD
CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC
LIPNLVETVKGYAAQEKDVLTSVIEARAKATSIRVDASTVTDPAQFKQFQDAQAGLSSAL
CCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHEEEECHHHCCCHHHHHHHHHHHHHHHHHH
GRLIAVSEAYPDLKSNQNFLALQSQIEGTENRIAVARRDYIEAVRVYNTELKTFPGLLWA
HHHHHHHHHCCCCCCCCCCEEHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
STFYRSYRPMETFTISEQQMQVPKVKFN
HHHHHHCCCCHHEEECHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11860552 [H]