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The map label for this gene is aapJ [H]

Identifier: 154245585

GI number: 154245585

Start: 1859313

End: 1860326

Strand: Direct

Name: aapJ [H]

Synonym: Xaut_1640

Alternate gene names: 154245585

Gene position: 1859313-1860326 (Clockwise)

Preceding gene: 154245584

Following gene: 154245586

Centisome position: 35.02

GC content: 65.68

Gene sequence:

>1014_bases
ATGAAGACGATCCTGGCGCTTCTGGCCGGCGCCACCTTTGCGCTTGCCGCAACGGCGGCTTCGGCCCAGACCCTGAAGAC
GGTGAAGGACCGCGGCGAACTGGTCTGCGGCGTGTCCAAGGGCCTGCCCGGCTTCTCGGCGCCCGACGCCTCCGGCAAGT
GGACCGGCTTCGACGTGGATGTGTGCCGGGGCCTCGCCGCCGCCATCTTCAACGACCCGAACAAGGTGAAGTTCGTGCCG
CTGTCGGCGGACGAGCGCTTCCCCGCCCTCACCAAGGGCGACGTGGACATGCTCTCGCGCAACTCCACCTGGACGCTCGA
GCGTGAGGCCAAGCTCGGCCTGCTGTTCACCGCCATCAATTATTATGACGGCCAGGGCTTCCTGGTGCGCGACGCCCGAA
AGGTCACGTCCGCCCTGGAGCTGGACAAGTCCAAGGTCTGCGTCCAGGCCGGCACCACCGCCGAGGACAACACCAAGGAC
TATTTCGCCGCCAACGGGATGACGCTGGAACTCGTCACCCTGCCCACCAGCACCGACCTGGTGAAGGCCTATGAAGAGGG
CAAGTGCGACACCCTCACCACGGATGTGTCGCAGCTCTATGCCCTGCGCCTGACCATGGCGAAGCCCGGCGACCATATCG
TGCTGCCCGACGTGATCTCCAAGGAGCCCCTCGGCCCCGTGGTGCGCCAGGGCGACGACCAGTGGTTCAACCTCGTCAAG
TGGACCATCTTCGGCATGATCAATGCCGAGGAACTCGGCGTGTCCACCACCACCATCGACGCGGCGCTCGCCTCCAAGAA
GCCGGAAGTGATCCGCCTCGTGGGCAATGACGGCAAGTTCGGCGAGCAGCTGGGCGTCTCCAACGATTTCGTCGTGCGCA
TCGTGAAGGCGGTGGGCAATTACGGCGAAAGCTTCGAGCGCAACGTGGGCGCCGCCTCCAAGCTCGGCATTCCGCGCGGC
ATCAACCAGCTGTGGAGCATGGGCGGCATCCAGTACGCCCCGCCGGTGCGCTGA

Upstream 100 bases:

>100_bases
CTCTACGGCCGCGTGCCCGTGGGCACCAAGGTCGTCGTGCGCCAGCAGGCCGCCCTCTGAGGGCGGTCCTTTTTCTCCTT
ATTTCTCACTGGGGGCATTC

Downstream 100 bases:

>100_bases
GCGTCAGCCTTTTTCCGCTATAAGTCCTTGAAGGGCCGGTCCGTTTGCGCGGGCCGGCCCTTTTCGCTCGCGGCGATGTG
AGAGTGAATTGCCGTTGCGG

Product: extracellular solute-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 337; Mature: 337

Protein sequence:

>337_residues
MKTILALLAGATFALAATAASAQTLKTVKDRGELVCGVSKGLPGFSAPDASGKWTGFDVDVCRGLAAAIFNDPNKVKFVP
LSADERFPALTKGDVDMLSRNSTWTLEREAKLGLLFTAINYYDGQGFLVRDARKVTSALELDKSKVCVQAGTTAEDNTKD
YFAANGMTLELVTLPTSTDLVKAYEEGKCDTLTTDVSQLYALRLTMAKPGDHIVLPDVISKEPLGPVVRQGDDQWFNLVK
WTIFGMINAEELGVSTTTIDAALASKKPEVIRLVGNDGKFGEQLGVSNDFVVRIVKAVGNYGESFERNVGAASKLGIPRG
INQLWSMGGIQYAPPVR

Sequences:

>Translated_337_residues
MKTILALLAGATFALAATAASAQTLKTVKDRGELVCGVSKGLPGFSAPDASGKWTGFDVDVCRGLAAAIFNDPNKVKFVP
LSADERFPALTKGDVDMLSRNSTWTLEREAKLGLLFTAINYYDGQGFLVRDARKVTSALELDKSKVCVQAGTTAEDNTKD
YFAANGMTLELVTLPTSTDLVKAYEEGKCDTLTTDVSQLYALRLTMAKPGDHIVLPDVISKEPLGPVVRQGDDQWFNLVK
WTIFGMINAEELGVSTTTIDAALASKKPEVIRLVGNDGKFGEQLGVSNDFVVRIVKAVGNYGESFERNVGAASKLGIPRG
INQLWSMGGIQYAPPVR
>Mature_337_residues
MKTILALLAGATFALAATAASAQTLKTVKDRGELVCGVSKGLPGFSAPDASGKWTGFDVDVCRGLAAAIFNDPNKVKFVP
LSADERFPALTKGDVDMLSRNSTWTLEREAKLGLLFTAINYYDGQGFLVRDARKVTSALELDKSKVCVQAGTTAEDNTKD
YFAANGMTLELVTLPTSTDLVKAYEEGKCDTLTTDVSQLYALRLTMAKPGDHIVLPDVISKEPLGPVVRQGDDQWFNLVK
WTIFGMINAEELGVSTTTIDAALASKKPEVIRLVGNDGKFGEQLGVSNDFVVRIVKAVGNYGESFERNVGAASKLGIPRG
INQLWSMGGIQYAPPVR

Specific function: Part of a binding-protein-dependent transport system for L-amino acids, affects the uptake as well as efflux of these amino acids [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 3 family [H]

Homologues:

Organism=Escherichia coli, GI1786876, Length=224, Percent_Identity=23.6607142857143, Blast_Score=62, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005768
- InterPro:   IPR001638
- InterPro:   IPR018313 [H]

Pfam domain/function: PF00497 SBP_bac_3 [H]

EC number: NA

Molecular weight: Translated: 36191; Mature: 36191

Theoretical pI: Translated: 5.53; Mature: 5.53

Prosite motif: PS01039 SBP_BACTERIAL_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTILALLAGATFALAATAASAQTLKTVKDRGELVCGVSKGLPGFSAPDASGKWTGFDVD
CHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCHH
VCRGLAAAIFNDPNKVKFVPLSADERFPALTKGDVDMLSRNSTWTLEREAKLGLLFTAIN
HHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHCCCCCEEEECCCCEEEEEEEEE
YYDGQGFLVRDARKVTSALELDKSKVCVQAGTTAEDNTKDYFAANGMTLELVTLPTSTDL
EECCCEEEEHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCEEEECCCEEEEEECCCCHHH
VKAYEEGKCDTLTTDVSQLYALRLTMAKPGDHIVLPDVISKEPLGPVVRQGDDQWFNLVK
HHHHHCCCCCEEHHHHHHHHHEEEEECCCCCEEEECHHHCCCCCCHHHHCCCHHHHHHHH
WTIFGMINAEELGVSTTTIDAALASKKPEVIRLVGNDGKFGEQLGVSNDFVVRIVKAVGN
HHHHEEECHHHHCCCHHHHHHHHHCCCCCEEEEECCCCCCHHHHCCCCHHHHHHHHHHCC
YGESFERNVGAASKLGIPRGINQLWSMGGIQYAPPVR
CCHHHHHCCCCHHHCCCCCCHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MKTILALLAGATFALAATAASAQTLKTVKDRGELVCGVSKGLPGFSAPDASGKWTGFDVD
CHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCHH
VCRGLAAAIFNDPNKVKFVPLSADERFPALTKGDVDMLSRNSTWTLEREAKLGLLFTAIN
HHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHCCCCCEEEECCCCEEEEEEEEE
YYDGQGFLVRDARKVTSALELDKSKVCVQAGTTAEDNTKDYFAANGMTLELVTLPTSTDL
EECCCEEEEHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCEEEECCCEEEEEECCCCHHH
VKAYEEGKCDTLTTDVSQLYALRLTMAKPGDHIVLPDVISKEPLGPVVRQGDDQWFNLVK
HHHHHCCCCCEEHHHHHHHHHEEEEECCCCCEEEECHHHCCCCCCHHHHCCCHHHHHHHH
WTIFGMINAEELGVSTTTIDAALASKKPEVIRLVGNDGKFGEQLGVSNDFVVRIVKAVGN
HHHHEEECHHHHCCCHHHHHHHHHCCCCCEEEEECCCCCCHHHHCCCCHHHHHHHHHHCC
YGESFERNVGAASKLGIPRGINQLWSMGGIQYAPPVR
CCHHHHHCCCCHHHCCCCCCHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8898392 [H]