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The map label for this gene is chrR [H]

Identifier: 154245575

GI number: 154245575

Start: 1847925

End: 1848632

Strand: Direct

Name: chrR [H]

Synonym: Xaut_1630

Alternate gene names: 154245575

Gene position: 1847925-1848632 (Clockwise)

Preceding gene: 154245574

Following gene: 154245577

Centisome position: 34.81

GC content: 73.73

Gene sequence:

>708_bases
ATGAGCGTCCATTCCCATCCCGGCGATGCGACCCTGCTGCGGTATGCGGCAGGCACGCTGCCGGCCGGGCCGGCCCTGCT
GGTGGAGATCCACCTTCAGGGTTGCCCGCACTGCCGCGCGGCGGTGCGCCGGTTCGAGGCGGTGGGCGGGGCGCTGCTGG
ACGCCGCCGAGCCGGCTGCCCTCGCCGCCGACGCTTTCGCCCGCACCCTGGCGCGGCTTGGACCCGCCCCCGTGTCCGGG
GGCCTGACGGGCGGTGGCGCCCGGCGGGATCATCTGGAGGCGGCCTTCTCCGGACCGGCCGCCGCGCCGCGCCTTCCCGA
GGGGCTGGTGCTGCCGGAAGGCGTCCGCCTACCGCGGCCGCTCACCTCCCGCCGCATCGGCGCCATGATGCCGGTGGCGC
CCGGCGTGCGCGTGGGGCGGGTGCATGTACCCGAGGACGGGCAGTCCAACGTGTTCCTGTTCCAGATCGGGCCGGGCCGG
GCCATTCCCCGGCACACCCACGACGGGACGGAATACACCCACGTTATCTGCGGCGGCTTCAGCGACCCGTCCGGCCATTA
CGGTGCCGGCGACCTGGTGGAGGCGGACGGGGACGTGGAGCATTCACCGCGGGTGGATGATGATGGCACCTGCATCTGCC
TTGCCGCCTTCGAGGGTCGCCTGCGCTTTCGCGGCCTGCTGGGCGTGGTGCTGCGGCCGTTCCTTTGA

Upstream 100 bases:

>100_bases
ATTCGCAGATCGCGCAGGAGCTGGGCATTCCGCTCGGCACCGCCAAATCGCGCGTCCGCCTGGCGCTGAGCCGCCTGCGC
ACGCTGCTGGAAGATTTGAA

Downstream 100 bases:

>100_bases
GAGCGCTCAAAAGGAATTGCGGGGCACGCCCTTCTTCACCACCGACAGGGCACGGGAGAGGTCGGTCGCCAGCGCCGCCT
TCTGGTCCGGCCCCAGAAAG

Product: anti-ECFsigma factor, ChrR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 235; Mature: 234

Protein sequence:

>235_residues
MSVHSHPGDATLLRYAAGTLPAGPALLVEIHLQGCPHCRAAVRRFEAVGGALLDAAEPAALAADAFARTLARLGPAPVSG
GLTGGGARRDHLEAAFSGPAAAPRLPEGLVLPEGVRLPRPLTSRRIGAMMPVAPGVRVGRVHVPEDGQSNVFLFQIGPGR
AIPRHTHDGTEYTHVICGGFSDPSGHYGAGDLVEADGDVEHSPRVDDDGTCICLAAFEGRLRFRGLLGVVLRPFL

Sequences:

>Translated_235_residues
MSVHSHPGDATLLRYAAGTLPAGPALLVEIHLQGCPHCRAAVRRFEAVGGALLDAAEPAALAADAFARTLARLGPAPVSG
GLTGGGARRDHLEAAFSGPAAAPRLPEGLVLPEGVRLPRPLTSRRIGAMMPVAPGVRVGRVHVPEDGQSNVFLFQIGPGR
AIPRHTHDGTEYTHVICGGFSDPSGHYGAGDLVEADGDVEHSPRVDDDGTCICLAAFEGRLRFRGLLGVVLRPFL
>Mature_234_residues
SVHSHPGDATLLRYAAGTLPAGPALLVEIHLQGCPHCRAAVRRFEAVGGALLDAAEPAALAADAFARTLARLGPAPVSGG
LTGGGARRDHLEAAFSGPAAAPRLPEGLVLPEGVRLPRPLTSRRIGAMMPVAPGVRVGRVHVPEDGQSNVFLFQIGPGRA
IPRHTHDGTEYTHVICGGFSDPSGHYGAGDLVEADGDVEHSPRVDDDGTCICLAAFEGRLRFRGLLGVVLRPFL

Specific function: Anti-sigma factor that inhibits the activity of the extracytoplasmic function (ECF) sigma (E) factor, thereby indirectly regulating the transcription of the cycA and rpoE genes [H]

COG id: COG3806

COG function: function code T; Anti-sigma factor

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012807
- InterPro:   IPR011051
- InterPro:   IPR014710 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24439; Mature: 24308

Theoretical pI: Translated: 7.10; Mature: 7.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVHSHPGDATLLRYAAGTLPAGPALLVEIHLQGCPHCRAAVRRFEAVGGALLDAAEPAA
CCCCCCCCCHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCHHHHCCCCHH
LAADAFARTLARLGPAPVSGGLTGGGARRDHLEAAFSGPAAAPRLPEGLVLPEGVRLPRP
HHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
LTSRRIGAMMPVAPGVRVGRVHVPEDGQSNVFLFQIGPGRAIPRHTHDGTEYTHVICGGF
HHHHHHCCCCCCCCCCEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEEEECC
SDPSGHYGAGDLVEADGDVEHSPRVDDDGTCICLAAFEGRLRFRGLLGVVLRPFL
CCCCCCCCCCCEEECCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SVHSHPGDATLLRYAAGTLPAGPALLVEIHLQGCPHCRAAVRRFEAVGGALLDAAEPAA
CCCCCCCCHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCHHHHCCCCHH
LAADAFARTLARLGPAPVSGGLTGGGARRDHLEAAFSGPAAAPRLPEGLVLPEGVRLPRP
HHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
LTSRRIGAMMPVAPGVRVGRVHVPEDGQSNVFLFQIGPGRAIPRHTHDGTEYTHVICGGF
HHHHHHCCCCCCCCCCEEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEEEECC
SDPSGHYGAGDLVEADGDVEHSPRVDDDGTCICLAAFEGRLRFRGLLGVVLRPFL
CCCCCCCCCCCEEECCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7721683 [H]