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The map label for this gene is perR [C]

Identifier: 154245489

GI number: 154245489

Start: 1752061

End: 1752951

Strand: Direct

Name: perR [C]

Synonym: Xaut_1542

Alternate gene names: 154245489

Gene position: 1752061-1752951 (Clockwise)

Preceding gene: 154245478

Following gene: 154245496

Centisome position: 33.0

GC content: 68.46

Gene sequence:

>891_bases
ATGAACGCTCTCCCGCTCGGCGCCCTGCGCGCCTTCGAGGCTGCCGCCCGCACCGGCTCGTTCCGCGCCGCGGCGGAGGA
ACTCGCCATCTCGCCAAGCGCGGTCAGCCACGCCATCCGCAAGCTGGAGGACCTGATGGGGGTCCCATTGTTCGAGCGGG
AAGGGCGCATCGTGCGCCTCAATCCGGCGGGCGAGGCGCTTCAGCTCAGCGTTTCAACGGGTTTTGACGAATTGCGGCAC
GGCATCGAGCAGGTCAGCGGCCGGGCCAGCAATCATCTGCGGCTGCACTGCGCGCCCAGCATGGCGGCTCAGTGGCTGAT
GCCACGGCTGCGCGGGCTCATCGCCGAGCATCCGGGATTCGACATCCGCCTGTCCGCCAGTACGGATTATCCGCGTTTCC
TGAATGATGAATTTGATGCGGACATCTGCTACGGCCCGCCCCGGCAGGAGGGCCTCACCGTCATTCCCCTCGGCGAGGAG
ACGGTGCGCCCGCTCTGCGCGCCGGAGATGGCGGCCGGCATCCGCATCCCGGCGGACCTCTACGACCATCCGCTGATCGA
GAGCGAGCACAAGAGGCTGCGCTGGAATGCGTGGTTTCTCGCCAACGGCCTTGCCCCGCCGAGCCCGCGCGGCAGCCGCT
TCGATCGCAGCTTCATGGCCATTGCGGCGGCGGTGGACGGGCTTGGCGTGACGCTGGAATCCACTCGCCTCGCCGAACGC
GAGATCGCCGACGGCCGGTTGGTGGCGCCCCTCGACGGCGTCGCGCATGACTTGCGCTACCTGGGCCACTTCCTGGTTTT
TCCGGCAAAGTCCAAGCCGCGCAAGGCGGTCCGCATCTTCGCCGACTGGCTGGCCCGGGAACTGGGGCTGAAGCCACCCC
CCGCCCTGTGA

Upstream 100 bases:

>100_bases
CCCGATCCAATTTTGGTTGGCCGGAGTGTGTCGGAAGCCCTGAGCCGGGAAAAACACAAAAATTGCGCGAACCGGTGAAC
TGGGTTCATCTAAGGGAACC

Downstream 100 bases:

>100_bases
GGTCCACGAGGCCGCTCGGATCGGATCCCGCGCCCTGACACCGGAGCATCGCGACACGGCTTGCGACAGTACGGTCGTCG
ATGCTCCGGGCTCGCTCCCG

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 296; Mature: 296

Protein sequence:

>296_residues
MNALPLGALRAFEAAARTGSFRAAAEELAISPSAVSHAIRKLEDLMGVPLFEREGRIVRLNPAGEALQLSVSTGFDELRH
GIEQVSGRASNHLRLHCAPSMAAQWLMPRLRGLIAEHPGFDIRLSASTDYPRFLNDEFDADICYGPPRQEGLTVIPLGEE
TVRPLCAPEMAAGIRIPADLYDHPLIESEHKRLRWNAWFLANGLAPPSPRGSRFDRSFMAIAAAVDGLGVTLESTRLAER
EIADGRLVAPLDGVAHDLRYLGHFLVFPAKSKPRKAVRIFADWLARELGLKPPPAL

Sequences:

>Translated_296_residues
MNALPLGALRAFEAAARTGSFRAAAEELAISPSAVSHAIRKLEDLMGVPLFEREGRIVRLNPAGEALQLSVSTGFDELRH
GIEQVSGRASNHLRLHCAPSMAAQWLMPRLRGLIAEHPGFDIRLSASTDYPRFLNDEFDADICYGPPRQEGLTVIPLGEE
TVRPLCAPEMAAGIRIPADLYDHPLIESEHKRLRWNAWFLANGLAPPSPRGSRFDRSFMAIAAAVDGLGVTLESTRLAER
EIADGRLVAPLDGVAHDLRYLGHFLVFPAKSKPRKAVRIFADWLARELGLKPPPAL
>Mature_296_residues
MNALPLGALRAFEAAARTGSFRAAAEELAISPSAVSHAIRKLEDLMGVPLFEREGRIVRLNPAGEALQLSVSTGFDELRH
GIEQVSGRASNHLRLHCAPSMAAQWLMPRLRGLIAEHPGFDIRLSASTDYPRFLNDEFDADICYGPPRQEGLTVIPLGEE
TVRPLCAPEMAAGIRIPADLYDHPLIESEHKRLRWNAWFLANGLAPPSPRGSRFDRSFMAIAAAVDGLGVTLESTRLAER
EIADGRLVAPLDGVAHDLRYLGHFLVFPAKSKPRKAVRIFADWLARELGLKPPPAL

Specific function: Apparent Regulatory Gene Involved In Peroxide Resistance In Stationary Phase. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1786448, Length=286, Percent_Identity=53.1468531468531, Blast_Score=301, Evalue=5e-83,
Organism=Escherichia coli, GI1789173, Length=255, Percent_Identity=36.8627450980392, Blast_Score=152, Evalue=3e-38,
Organism=Escherichia coli, GI1788706, Length=298, Percent_Identity=28.8590604026846, Blast_Score=130, Evalue=1e-31,
Organism=Escherichia coli, GI145693193, Length=296, Percent_Identity=27.7027027027027, Blast_Score=90, Evalue=1e-19,
Organism=Escherichia coli, GI157672245, Length=188, Percent_Identity=31.3829787234043, Blast_Score=81, Evalue=8e-17,
Organism=Escherichia coli, GI1787128, Length=290, Percent_Identity=24.4827586206897, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1787589, Length=305, Percent_Identity=26.5573770491803, Blast_Score=75, Evalue=5e-15,
Organism=Escherichia coli, GI1790208, Length=242, Percent_Identity=28.5123966942149, Blast_Score=72, Evalue=4e-14,
Organism=Escherichia coli, GI1790262, Length=228, Percent_Identity=25.4385964912281, Blast_Score=68, Evalue=9e-13,
Organism=Escherichia coli, GI1789440, Length=301, Percent_Identity=23.2558139534884, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1789639, Length=188, Percent_Identity=27.6595744680851, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 32455; Mature: 32455

Theoretical pI: Translated: 7.31; Mature: 7.31

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNALPLGALRAFEAAARTGSFRAAAEELAISPSAVSHAIRKLEDLMGVPLFEREGRIVRL
CCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEE
NPAGEALQLSVSTGFDELRHGIEQVSGRASNHLRLHCAPSMAAQWLMPRLRGLIAEHPGF
CCCCCEEEEEHHCCHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHHHCCCCC
DIRLSASTDYPRFLNDEFDADICYGPPRQEGLTVIPLGEETVRPLCAPEMAAGIRIPADL
EEEEECCCCCCHHCCCCCCCCCCCCCCCCCCEEEEECCHHHHCCCCCHHHHCCCCCCHHH
YDHPLIESEHKRLRWNAWFLANGLAPPSPRGSRFDRSFMAIAAAVDGLGVTLESTRLAER
HCCCCCCCCHHHEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEHHHHHHHH
EIADGRLVAPLDGVAHDLRYLGHFLVFPAKSKPRKAVRIFADWLARELGLKPPPAL
HCCCCEEECCHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MNALPLGALRAFEAAARTGSFRAAAEELAISPSAVSHAIRKLEDLMGVPLFEREGRIVRL
CCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEE
NPAGEALQLSVSTGFDELRHGIEQVSGRASNHLRLHCAPSMAAQWLMPRLRGLIAEHPGF
CCCCCEEEEEHHCCHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHHHCCCCC
DIRLSASTDYPRFLNDEFDADICYGPPRQEGLTVIPLGEETVRPLCAPEMAAGIRIPADL
EEEEECCCCCCHHCCCCCCCCCCCCCCCCCCEEEEECCHHHHCCCCCHHHHCCCCCCHHH
YDHPLIESEHKRLRWNAWFLANGLAPPSPRGSRFDRSFMAIAAAVDGLGVTLESTRLAER
HCCCCCCCCHHHEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEHHHHHHHH
EIADGRLVAPLDGVAHDLRYLGHFLVFPAKSKPRKAVRIFADWLARELGLKPPPAL
HCCCCEEECCHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]