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The map label for this gene is yfdR [C]

Identifier: 154245422

GI number: 154245422

Start: 1685638

End: 1686312

Strand: Reverse

Name: yfdR [C]

Synonym: Xaut_1475

Alternate gene names: 154245422

Gene position: 1686312-1685638 (Counterclockwise)

Preceding gene: 154245426

Following gene: 154245421

Centisome position: 31.76

GC content: 70.52

Gene sequence:

>675_bases
GTGACGGCCGAGACGAAGCACCCCACACCCCCGCCCGAGGCGCCGGCGACCCCCCGGCAAGCCCCGCCCGCCCGCCGGAA
AACGCTGGCCCCGGCGCGGGCGTGGCAGCGCATGCTGTCGGGGCGGCGGCTCGACCTGCTGGATCCCTCCCCCCTCGACG
TGGAGATCGAGGACATCGCCCACGGTCTTGCCCGCGTCGCCCGCTGGAACGGGCAGACCTCGGGCGCCAACATCTTCTCG
GTGGCGCAGCATTCGCTGCTGGTGGAGCGCCTGTCGCGCCGCTCCCACCCGGACCTCGACCCGCGCTGGCGGCTGTGCGT
GCTGCTGCACGACGCCCCCGAATATGTGATCGGCGACATGATCTCGCCGTTCAAGGCAGTGCTGGGGGGTGACTACAAGG
CGGTGGAGGCCCGGCTCCTGGCAGCCATCTCCCTCCGCTTCGGCCTGCCGACGGTCTGGCCGGCGCCGCTGGTCAAGATC
GTGAAGGCATCGGACCATGCCGCCGCCTTTTTCGAGGCGACGCGTCTGGCCGGCTTCGCCGCCGAGGAGGCCAAGGCCTT
CTTCGGCCGCCCGGCCCGCCTCGACGCTGCGGCGGAAAAGGACTATCTCACCCCATGGGAGGCGGAGACCGCAAAAATGC
GGTTTCTGAAACGGTTCGAGGAGCTGAAGCCATGA

Upstream 100 bases:

>100_bases
TGGGAAAGCTCAGGCGAAAGGGCTCGGCCCGCCCGTGACGGGCGGCTTGTCGTGAGTGGGCGGGAGCTTACCCTTCCCGT
CAACCTGGAGCACGCGATTC

Downstream 100 bases:

>100_bases
TCCATGTCTGCTCCCTCGCCAAGCTGCACGATACGGTCGAGACCACGGGCGCGCGGCATGTCATCACGCTCATCAACGGC
AACACGGTGCTGACCCGTCC

Product: metal dependent phosphohydrolase

Products: NA

Alternate protein names: ORF5 [H]

Number of amino acids: Translated: 224; Mature: 223

Protein sequence:

>224_residues
MTAETKHPTPPPEAPATPRQAPPARRKTLAPARAWQRMLSGRRLDLLDPSPLDVEIEDIAHGLARVARWNGQTSGANIFS
VAQHSLLVERLSRRSHPDLDPRWRLCVLLHDAPEYVIGDMISPFKAVLGGDYKAVEARLLAAISLRFGLPTVWPAPLVKI
VKASDHAAAFFEATRLAGFAAEEAKAFFGRPARLDAAAEKDYLTPWEAETAKMRFLKRFEELKP

Sequences:

>Translated_224_residues
MTAETKHPTPPPEAPATPRQAPPARRKTLAPARAWQRMLSGRRLDLLDPSPLDVEIEDIAHGLARVARWNGQTSGANIFS
VAQHSLLVERLSRRSHPDLDPRWRLCVLLHDAPEYVIGDMISPFKAVLGGDYKAVEARLLAAISLRFGLPTVWPAPLVKI
VKASDHAAAFFEATRLAGFAAEEAKAFFGRPARLDAAAEKDYLTPWEAETAKMRFLKRFEELKP
>Mature_223_residues
TAETKHPTPPPEAPATPRQAPPARRKTLAPARAWQRMLSGRRLDLLDPSPLDVEIEDIAHGLARVARWNGQTSGANIFSV
AQHSLLVERLSRRSHPDLDPRWRLCVLLHDAPEYVIGDMISPFKAVLGGDYKAVEARLLAAISLRFGLPTVWPAPLVKIV
KASDHAAAFFEATRLAGFAAEEAKAFFGRPARLDAAAEKDYLTPWEAETAKMRFLKRFEELKP

Specific function: Unknown

COG id: COG1896

COG function: function code R; Predicted hydrolases of HD superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003607 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24872; Mature: 24741

Theoretical pI: Translated: 10.03; Mature: 10.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAETKHPTPPPEAPATPRQAPPARRKTLAPARAWQRMLSGRRLDLLDPSPLDVEIEDIA
CCCCCCCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCEEHHHHH
HGLARVARWNGQTSGANIFSVAQHSLLVERLSRRSHPDLDPRWRLCVLLHDAPEYVIGDM
HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCHHHHHHH
ISPFKAVLGGDYKAVEARLLAAISLRFGLPTVWPAPLVKIVKASDHAAAFFEATRLAGFA
HHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHH
AEEAKAFFGRPARLDAAAEKDYLTPWEAETAKMRFLKRFEELKP
HHHHHHHHCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TAETKHPTPPPEAPATPRQAPPARRKTLAPARAWQRMLSGRRLDLLDPSPLDVEIEDIA
CCCCCCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCEEHHHHH
HGLARVARWNGQTSGANIFSVAQHSLLVERLSRRSHPDLDPRWRLCVLLHDAPEYVIGDM
HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCHHHHHHH
ISPFKAVLGGDYKAVEARLLAAISLRFGLPTVWPAPLVKIVKASDHAAAFFEATRLAGFA
HHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHH
AEEAKAFFGRPARLDAAAEKDYLTPWEAETAKMRFLKRFEELKP
HHHHHHHHCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8282711 [H]