| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is 154245380
Identifier: 154245380
GI number: 154245380
Start: 1645996
End: 1646634
Strand: Direct
Name: 154245380
Synonym: Xaut_1433
Alternate gene names: NA
Gene position: 1645996-1646634 (Clockwise)
Preceding gene: 154245378
Following gene: 154245381
Centisome position: 31.0
GC content: 66.67
Gene sequence:
>639_bases GTGCGGCGGGCGTCGAAAACGCCGGTCGCGAAGGCCGTGGCGCCCGCTCCGGCGCGGGTGCGGGACGACCTTCCGGCCAT CGCGCTTCCGCTGTCGCCGGCGGAGCTTGATCCTGCCAACCGGGCGTATTTTGACAAGTGCCTGGAGAAGATCGGCTTCG TTCCGAACGTGCTTCAGGCCTATGCGTTCGACATGGCGAAGCTTTCGGCCTTCGCGGCCATGTACAACGACCTGATGCTC GCGCCGTCCGGCCTCTCAAAGTTGGAACGGGAGATGATCGCGGTGGTCGTGTCCGCCGTGAACCGCTGTTACTACTGTCT CACTGCCCACGGTGCGGCGGTGCGCCAGCTGTCCGGCGATCCCATCCTGGGCGAGCAACTCGTGATGAATTATCGCGCCG CAAGGCTCGATCCCCGCCGGCGCGCCATGCTCGACTTCGCCGCCAAGCTCACCGAACGCCCCAATGAGGTGGAGGAGGAG GACCGCGAGGCCCTGCGCCGCGTCGGTCTCTCGGAGCGGGACATCTGGGATGTCTCGGCGGTGGTGGGCTTCTTCAACAT GTCGAACCGAATCGCCTCGGCCACCGACATGCGCCCCAACGAGGCCTACCACGCCCAGGCCCGCACCCTGCCGGAGTGA
Upstream 100 bases:
>100_bases CGTGGGCGCCGAAAAGGGCAAAAGCGGGACTGCTGAAAATAAAGGCGCGCCTGTGAAAAAGGCGTCAGCCAGACAGGCTC TCTCCACAACGGCGGCGGCC
Downstream 100 bases:
>100_bases GGGGTGTCTGCTCCCGGTCCTGCCGGTGTCGGCGACGGTCCGCGGCTCAGGCTGGCGGCCCGTGCGCTGAAGTTGTATTT CGTCGAGAGGTATATCTCAT
Product: peroxidase-like protein
Products: NA
Alternate protein names: Alkylhydroperoxidase AhpD Family Core Domain Protein; Peroxidase-Like Protein; Alkylhydroperoxidase; Peroxidase-Like; Alkylhydroperoxidase AhpD Core; 4-Carboxymuconolactone Decarboxylase; Alkylhydroperoxidase AhpD Domain Protein; Peroxidase-Related Subfamily; Alkylhydroperoxidase-Related; Peroxidase Related Protein; Alkylhydroperoxidase Ahpd Family Core Domain; Alkylhydroperoxidase AhpD; Macrophage Infectivity Potentiator-Related Protein; Carboxymuconolactone Decarboxylase; Peroxidase-Related Protein
Number of amino acids: Translated: 212; Mature: 212
Protein sequence:
>212_residues MRRASKTPVAKAVAPAPARVRDDLPAIALPLSPAELDPANRAYFDKCLEKIGFVPNVLQAYAFDMAKLSAFAAMYNDLML APSGLSKLEREMIAVVVSAVNRCYYCLTAHGAAVRQLSGDPILGEQLVMNYRAARLDPRRRAMLDFAAKLTERPNEVEEE DREALRRVGLSERDIWDVSAVVGFFNMSNRIASATDMRPNEAYHAQARTLPE
Sequences:
>Translated_212_residues MRRASKTPVAKAVAPAPARVRDDLPAIALPLSPAELDPANRAYFDKCLEKIGFVPNVLQAYAFDMAKLSAFAAMYNDLML APSGLSKLEREMIAVVVSAVNRCYYCLTAHGAAVRQLSGDPILGEQLVMNYRAARLDPRRRAMLDFAAKLTERPNEVEEE DREALRRVGLSERDIWDVSAVVGFFNMSNRIASATDMRPNEAYHAQARTLPE >Mature_212_residues MRRASKTPVAKAVAPAPARVRDDLPAIALPLSPAELDPANRAYFDKCLEKIGFVPNVLQAYAFDMAKLSAFAAMYNDLML APSGLSKLEREMIAVVVSAVNRCYYCLTAHGAAVRQLSGDPILGEQLVMNYRAARLDPRRRAMLDFAAKLTERPNEVEEE DREALRRVGLSERDIWDVSAVVGFFNMSNRIASATDMRPNEAYHAQARTLPE
Specific function: Unknown
COG id: COG2128
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23513; Mature: 23513
Theoretical pI: Translated: 8.04; Mature: 8.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRASKTPVAKAVAPAPARVRDDLPAIALPLSPAELDPANRAYFDKCLEKIGFVPNVLQA CCCCCCCCHHHHHCCCCHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHHCCCHHHHHH YAFDMAKLSAFAAMYNDLMLAPSGLSKLEREMIAVVVSAVNRCYYCLTAHGAAVRQLSGD HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCC PILGEQLVMNYRAARLDPRRRAMLDFAAKLTERPNEVEEEDREALRRVGLSERDIWDVSA CCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHH VVGFFNMSNRIASATDMRPNEAYHAQARTLPE HHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCC >Mature Secondary Structure MRRASKTPVAKAVAPAPARVRDDLPAIALPLSPAELDPANRAYFDKCLEKIGFVPNVLQA CCCCCCCCHHHHHCCCCHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHHCCCHHHHHH YAFDMAKLSAFAAMYNDLMLAPSGLSKLEREMIAVVVSAVNRCYYCLTAHGAAVRQLSGD HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCC PILGEQLVMNYRAARLDPRRRAMLDFAAKLTERPNEVEEEDREALRRVGLSERDIWDVSA CCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHH VVGFFNMSNRIASATDMRPNEAYHAQARTLPE HHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA