| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
Click here to switch to the map view.
The map label for this gene is 154245356
Identifier: 154245356
GI number: 154245356
Start: 1613490
End: 1614023
Strand: Reverse
Name: 154245356
Synonym: Xaut_1409
Alternate gene names: NA
Gene position: 1614023-1613490 (Counterclockwise)
Preceding gene: 154245357
Following gene: 154245352
Centisome position: 30.4
GC content: 67.23
Gene sequence:
>534_bases GTGCTGCTGTTCGTCGCATTCGCGGTGGTGCTGGGCGCCATCGCCCACATCGTCTCCATCCTCGCCATGCCGGCGCTGGC CGAGCGCAACGCCTATGCCCGGCTGTCCGAGCGGATGGATTCCAACGTGCTCACCCTGCTGCCGGACCCCTCGCCCCAGG AGCAGGTGCTGCCCATGATGGACCCCGCCTTCGTGTCTGCGGTGTGCCTTTACGATCTGTCGGAAGCGCCGCTGAAGGTG CGGGTGCCGGCGACGGCCGACTACACCTCGGTGTCCTTCTATACGGCGGAGGGCCTTGCCTTCTATGCGCTGAGCGACCA GGCGGCGGGCAAGGTGATCGAGCTCGACCTCATGACGGCGAGCCAGAAGGCGGCCTTGCCGGAGGATGAGGAAATCACTG CCGCGGACCGGCTTGTGATCGAATCCCCCGCTCTGGAGGGCATCGTCGCGGTGCGGGCATTCGTGCGCGAGCGAGGCACA CGGGCATTCGTGCGGCGCCAGCTCGAGGCCGCGACCTGCACGCTCTCAAACTAG
Upstream 100 bases:
>100_bases GCGTTTTGCCCGGCGCGCCGGACGCTTCCTCGGCAGCCTGCCGCGCCCGCATTTCTCCCGCCCGCGCCTGTCGCGGCCGC GCTTCGGCTCGCCCGGGCAG
Downstream 100 bases:
>100_bases CTCAGCGGGCGCGCCGGCCGTTGTTGCTGCGGGGCACCGGACCCGGCAATCGCGCCTCATACCGTTCCACGCGCACCACC GGCAGGATCACGATGTCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 177; Mature: 177
Protein sequence:
>177_residues MLLFVAFAVVLGAIAHIVSILAMPALAERNAYARLSERMDSNVLTLLPDPSPQEQVLPMMDPAFVSAVCLYDLSEAPLKV RVPATADYTSVSFYTAEGLAFYALSDQAAGKVIELDLMTASQKAALPEDEEITAADRLVIESPALEGIVAVRAFVRERGT RAFVRRQLEAATCTLSN
Sequences:
>Translated_177_residues MLLFVAFAVVLGAIAHIVSILAMPALAERNAYARLSERMDSNVLTLLPDPSPQEQVLPMMDPAFVSAVCLYDLSEAPLKV RVPATADYTSVSFYTAEGLAFYALSDQAAGKVIELDLMTASQKAALPEDEEITAADRLVIESPALEGIVAVRAFVRERGT RAFVRRQLEAATCTLSN >Mature_177_residues MLLFVAFAVVLGAIAHIVSILAMPALAERNAYARLSERMDSNVLTLLPDPSPQEQVLPMMDPAFVSAVCLYDLSEAPLKV RVPATADYTSVSFYTAEGLAFYALSDQAAGKVIELDLMTASQKAALPEDEEITAADRLVIESPALEGIVAVRAFVRERGT RAFVRRQLEAATCTLSN
Specific function: Unknown
COG id: COG5436
COG function: function code S; Predicted integral membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19105; Mature: 19105
Theoretical pI: Translated: 4.37; Mature: 4.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLFVAFAVVLGAIAHIVSILAMPALAERNAYARLSERMDSNVLTLLPDPSPQEQVLPMM CHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCEEEECCCCCCHHHCCCCC DPAFVSAVCLYDLSEAPLKVRVPATADYTSVSFYTAEGLAFYALSDQAAGKVIELDLMTA CHHHHHHHHHHCCCCCCEEEECCCCCCCCEEEEEEECCEEEEEECCCCCCCEEEEEEEEC SQKAALPEDEEITAADRLVIESPALEGIVAVRAFVRERGTRAFVRRQLEAATCTLSN CCCCCCCCCCCCHHHHHEEEECCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHEECCC >Mature Secondary Structure MLLFVAFAVVLGAIAHIVSILAMPALAERNAYARLSERMDSNVLTLLPDPSPQEQVLPMM CHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCEEEECCCCCCHHHCCCCC DPAFVSAVCLYDLSEAPLKVRVPATADYTSVSFYTAEGLAFYALSDQAAGKVIELDLMTA CHHHHHHHHHHCCCCCCEEEECCCCCCCCEEEEEEECCEEEEEECCCCCCCEEEEEEEEC SQKAALPEDEEITAADRLVIESPALEGIVAVRAFVRERGTRAFVRRQLEAATCTLSN CCCCCCCCCCCCHHHHHEEEECCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA