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The map label for this gene is ydaC [H]

Identifier: 154245230

GI number: 154245230

Start: 1475517

End: 1476179

Strand: Reverse

Name: ydaC [H]

Synonym: Xaut_1282

Alternate gene names: 154245230

Gene position: 1476179-1475517 (Counterclockwise)

Preceding gene: 154245231

Following gene: 154245227

Centisome position: 27.81

GC content: 72.85

Gene sequence:

>663_bases
ATGGCGAAGGCGGGTGAACCACGGCCGGGCGCGGGCCTTTGGCACCGGCTCGGCCGCCAGCTCGCCCGGCCGCAGGGCCG
GGCCGGCGCCCTTGCCGGCCACCTCATGGCGTGGGTGAACCGGCGGCCCAATGCCCTCGCCATCGCGGCGCTGGAGGTCC
GCCCCGACGACCACGTGCTGGAAATCGGGTTCGGGCCGGGCGATGGCCTCGCCATGCTGGCGCGGCAGGCGGGCCTTGGG
CTCATCCACGGCATCGATGGCTCACCGGCCATGCTGGCGCAGGCCAGCCGCCGCAACGCGCAGGCCATCGCCGAGGGCCG
CATGCGCCTTGCCACCGGCGACATGCGCCGCCTCCCCTTCCCGGATGCCAGCTTCGACAAGGTGCTGGGGGTGAACGTGG
CCTATTTCTTCGATCCGGACGGGGCCGCGGTGGCCGAGATCCATCGCGTGCTGCGGCCGGGCGGGCGGGTCGCGCTCTAT
GTGACCGACCGAGCCACCATGGCCGGCTGGCCGTTCGCCGACCCCAGAACCCATGTGACCTATGACTGGGCGGATCTGAA
GCACCTCATCGCCGGTGGCGGCTTCGAGCCGGCACGGGTGATGATCCGCGCCCTCGACCTACCCCTGGGGGTCAAGGGCC
TCATCGCCACCGCCCGGCGCTGA

Upstream 100 bases:

>100_bases
ATGCCGACCGGCCCCTGTGGGACGAGAACCGACGCCTCGTGATCCACGAGAAGCTCGACCAGATAAAGGCCAAGCAGTGA
ACCCGCCCGAGCAGGCCCTG

Downstream 100 bases:

>100_bases
GGGGCGATCTCAACCCACCTCGGTGCCGAGGGGCGGGAAGCACATTTCCGCGCAGCCGCCCACGATGCCGTTGGAGAGTT
CCAGCCGGCCGCCATGAACC

Product: type 11 methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 220; Mature: 219

Protein sequence:

>220_residues
MAKAGEPRPGAGLWHRLGRQLARPQGRAGALAGHLMAWVNRRPNALAIAALEVRPDDHVLEIGFGPGDGLAMLARQAGLG
LIHGIDGSPAMLAQASRRNAQAIAEGRMRLATGDMRRLPFPDASFDKVLGVNVAYFFDPDGAAVAEIHRVLRPGGRVALY
VTDRATMAGWPFADPRTHVTYDWADLKHLIAGGGFEPARVMIRALDLPLGVKGLIATARR

Sequences:

>Translated_220_residues
MAKAGEPRPGAGLWHRLGRQLARPQGRAGALAGHLMAWVNRRPNALAIAALEVRPDDHVLEIGFGPGDGLAMLARQAGLG
LIHGIDGSPAMLAQASRRNAQAIAEGRMRLATGDMRRLPFPDASFDKVLGVNVAYFFDPDGAAVAEIHRVLRPGGRVALY
VTDRATMAGWPFADPRTHVTYDWADLKHLIAGGGFEPARVMIRALDLPLGVKGLIATARR
>Mature_219_residues
AKAGEPRPGAGLWHRLGRQLARPQGRAGALAGHLMAWVNRRPNALAIAALEVRPDDHVLEIGFGPGDGLAMLARQAGLGL
IHGIDGSPAMLAQASRRNAQAIAEGRMRLATGDMRRLPFPDASFDKVLGVNVAYFFDPDGAAVAEIHRVLRPGGRVALYV
TDRATMAGWPFADPRTHVTYDWADLKHLIAGGGFEPARVMIRALDLPLGVKGLIATARR

Specific function: Bioc Is Involved In An Early, But Chemically Unexplored, Step In The Conversion Of Pimelic Acid To Biotin. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily [H]

Homologues:

Organism=Caenorhabditis elegans, GI71991428, Length=146, Percent_Identity=32.1917808219178, Blast_Score=72, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013216 [H]

Pfam domain/function: PF08241 Methyltransf_11 [H]

EC number: NA

Molecular weight: Translated: 23555; Mature: 23423

Theoretical pI: Translated: 11.24; Mature: 11.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKAGEPRPGAGLWHRLGRQLARPQGRAGALAGHLMAWVNRRPNALAIAALEVRPDDHVL
CCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCEEEEEEEEECCCCCEE
EIGFGPGDGLAMLARQAGLGLIHGIDGSPAMLAQASRRNAQAIAEGRMRLATGDMRRLPF
EEECCCCCHHHHHHHHCCCEEEECCCCCHHHHHHHHHCCHHHHHHCCEEEECCCCCCCCC
PDASFDKVLGVNVAYFFDPDGAAVAEIHRVLRPGGRVALYVTDRATMAGWPFADPRTHVT
CCCCCHHHHCCEEEEEECCCCHHHHHHHHHHCCCCEEEEEEECCCEECCCCCCCCCCEEE
YDWADLKHLIAGGGFEPARVMIRALDLPLGVKGLIATARR
ECHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHCCCC
>Mature Secondary Structure 
AKAGEPRPGAGLWHRLGRQLARPQGRAGALAGHLMAWVNRRPNALAIAALEVRPDDHVL
CCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCEEEEEEEEECCCCCEE
EIGFGPGDGLAMLARQAGLGLIHGIDGSPAMLAQASRRNAQAIAEGRMRLATGDMRRLPF
EEECCCCCHHHHHHHHCCCEEEECCCCCHHHHHHHHHCCHHHHHHCCEEEECCCCCCCCC
PDASFDKVLGVNVAYFFDPDGAAVAEIHRVLRPGGRVALYVTDRATMAGWPFADPRTHVT
CCCCCHHHHCCEEEEEECCCCHHHHHHHHHHCCCCEEEEEEECCCEECCCCCCCCCCEEE
YDWADLKHLIAGGGFEPARVMIRALDLPLGVKGLIATARR
ECHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]