| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is fabZ [H]
Identifier: 154245210
GI number: 154245210
Start: 1452082
End: 1452555
Strand: Reverse
Name: fabZ [H]
Synonym: Xaut_1262
Alternate gene names: 154245210
Gene position: 1452555-1452082 (Counterclockwise)
Preceding gene: 154245211
Following gene: 154245209
Centisome position: 27.36
GC content: 62.87
Gene sequence:
>474_bases ATGCGTCCTGAAGTCTTCAAGATGATCGACCGGGTCGTGTCCATCGACCCGTCGCTTCAGAAGATCCACTGCCAGGGACT GGTGCCGGAAGAGAGCTCCATCTTCGAGGGGCACTTTCCCGGCTATCCCATCATGCCCGGCGTGCTGCTCATCGAGGCCA TGGCCCAGACCACCGGCTGGCTGGTGCTCGCCCGCAACCGCTTCAACAAGATGCCCTTCCTCGCCACCGTCAAGGAGGCG AAGCTGCGCACCTTCGTGCTGCCCGGGCAGAATCTCGATCTTTATTCCGAGATCCTCCACGAGGGCTCGGGCTTCGTCGT GGCGAAGACCCAGGCCACCCTCGAAGGCAAGCCCATCTGCTCCGCCGAGCTCACCTTCCGCGTGCTCCCCTGGCCGGAAG GCAAGATGAAGCCCGTGGTGATGAAGGTGGCCGAGCACGTCTCCTTCCCCCTTGCGGACTTTGCAGATGCCTGA
Upstream 100 bases:
>100_bases CAACGACGGCAAGGCCACCACCGAGCAGTATTTCGTGCTCAAGAACCTGTGCGCCCGCATCGACGAGTTGGTCGCTGCGA AGGCCGCGTGAGGCGCCTAG
Downstream 100 bases:
>100_bases CGTGAACGCTGGCCGGCGCCGGATCCACCGCGACGTGTGGATCACCGGCATCGGCCTCGTCTCCTCCCTCGGGGAGGGGC TGGACGCCCATTGGGATGCG
Product: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ
Products: NA
Alternate protein names: (3R)-hydroxymyristoyl ACP dehydrase [H]
Number of amino acids: Translated: 157; Mature: 157
Protein sequence:
>157_residues MRPEVFKMIDRVVSIDPSLQKIHCQGLVPEESSIFEGHFPGYPIMPGVLLIEAMAQTTGWLVLARNRFNKMPFLATVKEA KLRTFVLPGQNLDLYSEILHEGSGFVVAKTQATLEGKPICSAELTFRVLPWPEGKMKPVVMKVAEHVSFPLADFADA
Sequences:
>Translated_157_residues MRPEVFKMIDRVVSIDPSLQKIHCQGLVPEESSIFEGHFPGYPIMPGVLLIEAMAQTTGWLVLARNRFNKMPFLATVKEA KLRTFVLPGQNLDLYSEILHEGSGFVVAKTQATLEGKPICSAELTFRVLPWPEGKMKPVVMKVAEHVSFPLADFADA >Mature_157_residues MRPEVFKMIDRVVSIDPSLQKIHCQGLVPEESSIFEGHFPGYPIMPGVLLIEAMAQTTGWLVLARNRFNKMPFLATVKEA KLRTFVLPGQNLDLYSEILHEGSGFVVAKTQATLEGKPICSAELTFRVLPWPEGKMKPVVMKVAEHVSFPLADFADA
Specific function: Involved in saturated fatty acids biosynthesis [H]
COG id: COG0764
COG function: function code I; 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the thioester dehydratase family. FabZ subfamily [H]
Homologues:
Organism=Escherichia coli, GI1786377, Length=122, Percent_Identity=31.1475409836066, Blast_Score=64, Evalue=5e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013114 - InterPro: IPR010084 [H]
Pfam domain/function: PF07977 FabA [H]
EC number: 4.2.1.-
Molecular weight: Translated: 17482; Mature: 17482
Theoretical pI: Translated: 6.94; Mature: 6.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPEVFKMIDRVVSIDPSLQKIHCQGLVPEESSIFEGHFPGYPIMPGVLLIEAMAQTTGW CCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHCCCE LVLARNRFNKMPFLATVKEAKLRTFVLPGQNLDLYSEILHEGSGFVVAKTQATLEGKPIC EEEECCCCCCCCHHEEHHCCCEEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCCCCC SAELTFRVLPWPEGKMKPVVMKVAEHVSFPLADFADA CCCEEEEEECCCCCCCCHHHHHHHHHCCCCCHHCCCC >Mature Secondary Structure MRPEVFKMIDRVVSIDPSLQKIHCQGLVPEESSIFEGHFPGYPIMPGVLLIEAMAQTTGW CCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHCCCE LVLARNRFNKMPFLATVKEAKLRTFVLPGQNLDLYSEILHEGSGFVVAKTQATLEGKPIC EEEECCCCCCCCHHEEHHCCCEEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCCCCC SAELTFRVLPWPEGKMKPVVMKVAEHVSFPLADFADA CCCEEEEEECCCCCCCCHHHHHHHHHCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Carbon-Oxygen Lyases; Hydro-Lyases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA