| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is idnK [H]
Identifier: 154245183
GI number: 154245183
Start: 1420732
End: 1421301
Strand: Reverse
Name: idnK [H]
Synonym: Xaut_1235
Alternate gene names: 154245183
Gene position: 1421301-1420732 (Counterclockwise)
Preceding gene: 154245186
Following gene: 154245182
Centisome position: 26.77
GC content: 69.12
Gene sequence:
>570_bases ATGGGCGACACGATTGCGGCCCTGGTGGTGATGGGCGTTTCGGGCTGCGGCAAAAGCAGCGTCGGCGCGGCCGTGGCCGA GCTGGCCGGGGCGCGCCTGATCGAAGGCGACAGTTTCCATCCCGCCAGCAACATCGCCAAGATGTCCGCCGGCATCCCCC TCGACGATGACGATCGCGCCGGCTGGCTGGCGCGCCTCGGCGAGGAGATGGCGCGCACCCTCGCTGACGGTGCGGCGCCG GTTCTCACCTGTTCGGCTCTGAAGTTGAAATATCGCGATGCCCTGCGTGCGGCTGTGCCGGGGCTCGGCTTCGTGTTCCT GGACCTGACACGGGAAATGGCGGCCCACCGCGTGGCCGAGCGGCCCGGACATTTCATGCCGGCGAGCCTCATCGACAGCC AGTTCGCGGCGCTGGAGCGCCCGTCGGCGGAGGCCCTGACACTGACCCTTGATGCGACGCTCCCCCTGTCCGAGATGGTG CCCCGCGTCGTGGAATGGTGGCGTGCGTCGGCGGAAAGGCGCGCAGGCGCGCGACATATCCCCGGCTCCACTCTCAGTCA GGCTGTCTAG
Upstream 100 bases:
>100_bases AATGGCCCCAGGACGCATGGCAGCTATGCTTCCGGCCGCGAAAGACAGCGCTATCTCAGGAAGCGCGTGACACCGCCCTG GGGGCGCGGGGGAGACGAAG
Downstream 100 bases:
>100_bases CCTCTGCTTTTTCCCCTCCGTCCGCACGGGGCGGGCCTGTTGATGCACGGCGTGCTTCGGCCTCGCGAGATAGCGCTATC TCACCATGCGTCAGCGAAAC
Product: carbohydrate kinase
Products: NA
Alternate protein names: Gluconate kinase 1 [H]
Number of amino acids: Translated: 189; Mature: 188
Protein sequence:
>189_residues MGDTIAALVVMGVSGCGKSSVGAAVAELAGARLIEGDSFHPASNIAKMSAGIPLDDDDRAGWLARLGEEMARTLADGAAP VLTCSALKLKYRDALRAAVPGLGFVFLDLTREMAAHRVAERPGHFMPASLIDSQFAALERPSAEALTLTLDATLPLSEMV PRVVEWWRASAERRAGARHIPGSTLSQAV
Sequences:
>Translated_189_residues MGDTIAALVVMGVSGCGKSSVGAAVAELAGARLIEGDSFHPASNIAKMSAGIPLDDDDRAGWLARLGEEMARTLADGAAP VLTCSALKLKYRDALRAAVPGLGFVFLDLTREMAAHRVAERPGHFMPASLIDSQFAALERPSAEALTLTLDATLPLSEMV PRVVEWWRASAERRAGARHIPGSTLSQAV >Mature_188_residues GDTIAALVVMGVSGCGKSSVGAAVAELAGARLIEGDSFHPASNIAKMSAGIPLDDDDRAGWLARLGEEMARTLADGAAPV LTCSALKLKYRDALRAAVPGLGFVFLDLTREMAAHRVAERPGHFMPASLIDSQFAALERPSAEALTLTLDATLPLSEMVP RVVEWWRASAERRAGARHIPGSTLSQAV
Specific function: Gluconate utilization system GNT-II. [C]
COG id: COG3265
COG function: function code G; Gluconate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gluconokinase gntK/gntV family [H]
Homologues:
Organism=Homo sapiens, GI299758445, Length=177, Percent_Identity=38.4180790960452, Blast_Score=119, Evalue=2e-27, Organism=Escherichia coli, GI1790719, Length=162, Percent_Identity=41.9753086419753, Blast_Score=137, Evalue=5e-34, Organism=Escherichia coli, GI87082265, Length=161, Percent_Identity=40.3726708074534, Blast_Score=119, Evalue=2e-28, Organism=Caenorhabditis elegans, GI25146487, Length=168, Percent_Identity=44.6428571428571, Blast_Score=132, Evalue=1e-31, Organism=Saccharomyces cerevisiae, GI6320454, Length=147, Percent_Identity=37.4149659863946, Blast_Score=106, Evalue=2e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000623 - InterPro: IPR006001 [H]
Pfam domain/function: PF01202 SKI [H]
EC number: =2.7.1.12 [H]
Molecular weight: Translated: 19847; Mature: 19716
Theoretical pI: Translated: 6.11; Mature: 6.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGDTIAALVVMGVSGCGKSSVGAAVAELAGARLIEGDSFHPASNIAKMSAGIPLDDDDRA CCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCEECCCCCCCHHHHHHHHCCCCCCCCCCH GWLARLGEEMARTLADGAAPVLTCSALKLKYRDALRAAVPGLGFVFLDLTREMAAHRVAE HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH RPGHFMPASLIDSQFAALERPSAEALTLTLDATLPLSEMVPRVVEWWRASAERRAGARHI CCCCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCC PGSTLSQAV CCHHHHHCC >Mature Secondary Structure GDTIAALVVMGVSGCGKSSVGAAVAELAGARLIEGDSFHPASNIAKMSAGIPLDDDDRA CHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCEECCCCCCCHHHHHHHHCCCCCCCCCCH GWLARLGEEMARTLADGAAPVLTCSALKLKYRDALRAAVPGLGFVFLDLTREMAAHRVAE HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH RPGHFMPASLIDSQFAALERPSAEALTLTLDATLPLSEMVPRVVEWWRASAERRAGARHI CCCCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCC PGSTLSQAV CCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7610040; 9278503; 9658018 [H]