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The map label for this gene is ssuC [H]

Identifier: 154245158

GI number: 154245158

Start: 1392239

End: 1393186

Strand: Reverse

Name: ssuC [H]

Synonym: Xaut_1210

Alternate gene names: 154245158

Gene position: 1393186-1392239 (Counterclockwise)

Preceding gene: 154245159

Following gene: 154245157

Centisome position: 26.24

GC content: 70.78

Gene sequence:

>948_bases
ATGAGCCTGTCCGGCCCCACCGAAGCCATCGCCTTCACCCACGGCGCGGCTGCCGGCACCCTGCCGGCCAGTAGCGTCCC
GGCCGTCGTCGGGGCACAGGCGGAGCGTCGCGATGCCGCCGGCACTGCCGGCCGGTCGCGGCTGGCAGGCACCGGGCAGG
CACTGGGCAGATCGCTGGCGAAGTCGCTCGCCCCCTGGGCGCTGCCGCTGGCCATCCTCGCCGTGTGGCAGGCGGCGGCG
AGCCTGGGCTTCCTCTCCTCCCGGGTGCTGCCGGCACCGGGGGACGTTGCGCTCGCCTTCTGGCGCACCCTGAAGGACGG
CACGCTCCTGTCCAACATCTGCGTCTCCACCGGCCGGGCGCTCACCGGCCTTGCCATCGGCGGCGGCATCGGCTTCGCGC
TCGGGGTGCTCAACGGGGTGTGGAAGCCGGCGGAAACCGCGCTGGATTCCACCCTGCAGATGCTGCGCAACGTGCCGCAC
CTCGCCATCATCCCCCTCGTCATCCTGTGGTTCGGCATCGGCGAGGAGGCCAAGATCTTCCTGGTGGCGGTGGGGGTGGC
CTTCCCCATCTATCTCAACACCTACCATGGCATCCGCAACGTGGACGCCGGCCTCGTCGAGATGGCGCGGGTCTACGGGC
TTTCGCCCGCCGCCCTGTTCACCCGCATCGTGCTGCCCGGAGCGCTGCCCTCGGTGCTGGTGGGCCTGCGTTACGCGCTG
GGCATCATGTGGCTGACCCTGATCGTGGCCGAGACCATCTCCTCCACCGAGGGCATCGGCTACATGACCATGAATGCCCG
CGAATTCCTCCAGACCGACGTGGTGGTGCTGGGCGTGCTGGCCTATGCCCTCCTCGGCAAGCTCGCCGACAGCCTGACGC
GGGGCATCGAGCAGCGCGCGCTGGCCTGGAACCCGGCCTACCAGCCCGGCGGCAAGGGAGTGGCGTGA

Upstream 100 bases:

>100_bases
ACGCCTTCTTCGCCCTGGGCCTCATCCCCAAGCCCATCCGCATCGCCGACGCCCTGCGCGCGCCCAAATCCTGAGTGCTG
AACTCCCGAGGAGATCCGCC

Downstream 100 bases:

>100_bases
TGGAAATCTTCGCCGCCAGCGACGCCGAGATCTCCGCCGCCCTCCGAGACCGGCACAGCCGCGAACCGGACAGCCGCGAA
CCCAACGGCCGCGTTTTGGA

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 315; Mature: 314

Protein sequence:

>315_residues
MSLSGPTEAIAFTHGAAAGTLPASSVPAVVGAQAERRDAAGTAGRSRLAGTGQALGRSLAKSLAPWALPLAILAVWQAAA
SLGFLSSRVLPAPGDVALAFWRTLKDGTLLSNICVSTGRALTGLAIGGGIGFALGVLNGVWKPAETALDSTLQMLRNVPH
LAIIPLVILWFGIGEEAKIFLVAVGVAFPIYLNTYHGIRNVDAGLVEMARVYGLSPAALFTRIVLPGALPSVLVGLRYAL
GIMWLTLIVAETISSTEGIGYMTMNAREFLQTDVVVLGVLAYALLGKLADSLTRGIEQRALAWNPAYQPGGKGVA

Sequences:

>Translated_315_residues
MSLSGPTEAIAFTHGAAAGTLPASSVPAVVGAQAERRDAAGTAGRSRLAGTGQALGRSLAKSLAPWALPLAILAVWQAAA
SLGFLSSRVLPAPGDVALAFWRTLKDGTLLSNICVSTGRALTGLAIGGGIGFALGVLNGVWKPAETALDSTLQMLRNVPH
LAIIPLVILWFGIGEEAKIFLVAVGVAFPIYLNTYHGIRNVDAGLVEMARVYGLSPAALFTRIVLPGALPSVLVGLRYAL
GIMWLTLIVAETISSTEGIGYMTMNAREFLQTDVVVLGVLAYALLGKLADSLTRGIEQRALAWNPAYQPGGKGVA
>Mature_314_residues
SLSGPTEAIAFTHGAAAGTLPASSVPAVVGAQAERRDAAGTAGRSRLAGTGQALGRSLAKSLAPWALPLAILAVWQAAAS
LGFLSSRVLPAPGDVALAFWRTLKDGTLLSNICVSTGRALTGLAIGGGIGFALGVLNGVWKPAETALDSTLQMLRNVPHL
AIIPLVILWFGIGEEAKIFLVAVGVAFPIYLNTYHGIRNVDAGLVEMARVYGLSPAALFTRIVLPGALPSVLVGLRYALG
IMWLTLIVAETISSTEGIGYMTMNAREFLQTDVVVLGVLAYALLGKLADSLTRGIEQRALAWNPAYQPGGKGVA

Specific function: Part of a binding-protein-dependent transport system for aliphatic sulfonates. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0600

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI87081802, Length=246, Percent_Identity=61.7886178861789, Blast_Score=293, Evalue=7e-81,
Organism=Escherichia coli, GI1786564, Length=242, Percent_Identity=33.8842975206612, Blast_Score=130, Evalue=9e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 32607; Mature: 32475

Theoretical pI: Translated: 9.84; Mature: 9.84

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLSGPTEAIAFTHGAAAGTLPASSVPAVVGAQAERRDAAGTAGRSRLAGTGQALGRSLA
CCCCCCCHHHEEECCCCCCCCCCCCCCHHHCCCHHHHHHCCCCCHHHHCCCHHHHHHHHH
KSLAPWALPLAILAVWQAAASLGFLSSRVLPAPGDVALAFWRTLKDGTLLSNICVSTGRA
HHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCH
LTGLAIGGGIGFALGVLNGVWKPAETALDSTLQMLRNVPHLAIIPLVILWFGIGEEAKIF
HHHEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEE
LVAVGVAFPIYLNTYHGIRNVDAGLVEMARVYGLSPAALFTRIVLPGALPSVLVGLRYAL
EEEHHHHHHHHHHHHCCHHCCHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHH
GIMWLTLIVAETISSTEGIGYMTMNAREFLQTDVVVLGVLAYALLGKLADSLTRGIEQRA
HHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAWNPAYQPGGKGVA
HCCCCCCCCCCCCCC
>Mature Secondary Structure 
SLSGPTEAIAFTHGAAAGTLPASSVPAVVGAQAERRDAAGTAGRSRLAGTGQALGRSLA
CCCCCCHHHEEECCCCCCCCCCCCCCHHHCCCHHHHHHCCCCCHHHHCCCHHHHHHHHH
KSLAPWALPLAILAVWQAAASLGFLSSRVLPAPGDVALAFWRTLKDGTLLSNICVSTGRA
HHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCH
LTGLAIGGGIGFALGVLNGVWKPAETALDSTLQMLRNVPHLAIIPLVILWFGIGEEAKIF
HHHEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEE
LVAVGVAFPIYLNTYHGIRNVDAGLVEMARVYGLSPAALFTRIVLPGALPSVLVGLRYAL
EEEHHHHHHHHHHHHCCHHCCHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHH
GIMWLTLIVAETISSTEGIGYMTMNAREFLQTDVVVLGVLAYALLGKLADSLTRGIEQRA
HHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAWNPAYQPGGKGVA
HCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10506196; 8905232; 9278503 [H]