| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is ybaL [H]
Identifier: 154245156
GI number: 154245156
Start: 1388952
End: 1390988
Strand: Reverse
Name: ybaL [H]
Synonym: Xaut_1208
Alternate gene names: 154245156
Gene position: 1390988-1388952 (Counterclockwise)
Preceding gene: 154245157
Following gene: 154245155
Centisome position: 26.2
GC content: 70.59
Gene sequence:
>2037_bases TTGCCCCACGAAACGCCGCTCATTGCGACACTCGTCGGGGCCTTCGTCCTCGCCTTCGTCTTCGGCGCCATCGCCCAGCG CTTCAAGCTGTCGCCGCTGGTGGGCTACCTGCTGGCCGGCGTCATGGTGGGACCGTTCACCCCCGGCTTCGTCGCCGACC AGAGCATGGCGCTGGAGCTGGCCGAGATCGGCGTCATCCTGCTCATGTTCGGCGTCGGCCTGCATTTTTCGCTGAGCGAC CTGTTGTCGGTGAAGGCCATCGCCATTCCCGGCGCGGTGCTGCAGATCGGCGTCGCAACCCTGATGGGCATGGGCCTCGC CTATGCCCTCGGCTGGGGGCTGGGCGCCGGCATCGTGTTCGGCCTCGCCCTGTCGGTGGCGAGCACCGTGGTGCTGCTTC GAGCGCTGCAGGAACGGCGCATGGTGGAAAGCGAGCAGGGCCGCATCGCGGTCGGCTGGCTCATCGTGGAAGACCTCGCC ATGGTGCTGGCGCTGGTGCTGCTGCCCGCCCTTTCCGGTGCCCTCGGCGGGCGCGTGGTGGCCACCCCCACCGTCGAATG GCTGGGCGGGGACGACGTGTGGATGACGCTGGGCATCACGCTGGCCAAGGTGGCCGGCTTCGTGGTGCTGATGCTGGTGG TGGGCCGGCGGGTCATTCCCGGCATCATGCACTGGGTGGCCCATATCGGCTCGCGGGAGCTGTTCCGCCTCGCCGTGCTG GCCATCGCGCTGGGCGTCGCCTTCGGCTCGGCCAAGCTGTTCGGGGTGTCGTTCGCGCTCGGCGCCTTCTTCGCCGGCAT GGTGCTGAGCGAATCGCCCCTGTCCCACCGCGCGGCGGAAGAGACGCTGCCCCTGCGCGACGCCTTCGCCGTGCTGTTCT TCGTCTCGGTGGGCATGCTGGTGGACCCCTCCATCGTCATCAAGAGCCCGATCCCGCTCATCATCACCGTGCTGATCGTG CTGTTCGGCAAGTCGCTGGCCGCCTTCCTGCTGGTGCGGGCGTTCGGCTACGGCAATATCACGGCGCTCACCATCTCCGC CTCGCTGGCGCAGATCGGCGAATTCTCCTTCATCCTGGTGGCGCTGGGCGTCGACCTCCACCTGCTGCCCGAGGAAGGCC GCGACCTCATCCTCGCGGCGGCGATCATCTCCATTCTCGCCAACCCCTTCTTCTTCCTGGCGCTGGATCGCTACCGGGCG AAGGCGGTGAAGGTGTCCACCGCCAATGCGGCGGCCGCGGCTCCGGCCCAGGCCGCGGCGGACAAGGCCGCGACAGCCAA GGGCGCGGAGAAGGGGGCGGAGAAGGCGCCGCCCGCCCCGACCCTGCCGGTCACCGCCCAGCAGGCCCATACGGTGCTGG TGGGCTACGGCCGGGTGGGCCACCTGGTGGCGGACGGGCTGAAGGCCGCCGGCCTGCCCTTCCTCGTCATCGAGGACCAG GAAGACCGGGTGGAGGAGCTGCGGCGCGGCGACATCGAGGTGATCGACGCCAATGCCGCCTCCCCCGCCGCCATCACCGC CGCCAACGTGGCGGGGGCGAGCCGGCTCATCCTCGCCATTCCCGACGGCTTCGAGGCCAGCGGCGTGCTGCGCAAGGCCC GCCAGATGAACCCCGGCATCGAGATCATCGCCCGCGCCCATTCGGACGCGGAGGTGGAGCACCTGCGCCAGGGCGGCGCC AATTTCATCATCATGGGCGAGCGCGAGGTGGCGCGCGGCATGCTGGCCCATGTGCTGGACCGCAGCGACGCCGACCTTGC CGCCGCCGTGCAGGCTGCCGGGGTCGCCAGCGGGACCGAGGCTGCATCCCCCTCCCCCGATGCGCCCGTCGCCGAGGTGG AGGTGAGCCCGGTCACGCCCCCCACTCAGTCCATTGCTGCGGCCGGGGCAACTCCTGCGCCCGCGCCCACCATGGTTCCA GCGGGCATCGCCGGGCCTGCGGCAACGCAGCCGCCGCTTTCGGCGCCGGAATCCGCTCCCGGCCCGGTCCCCGCCCTTGC GGAGAGCGCCGCAGCGGAGCAGAACGAAAAGGGTTAG
Upstream 100 bases:
>100_bases CGGCTGGCAGGGGCATTCGCCTGGACTGCCCTCATCCCAAATCCGGGCTCCCGCGCGCATCCGGCGCGAGACGCCCCCTT TGCCCGACGGAGGACGACCC
Downstream 100 bases:
>100_bases GCCGACTTAAATGCGAATAAGTTGCAATTGCAGTTTGGTGGGCCTATTTTTGCAAATGGATCGCAAATTGATGCGATAAT TGGATTGGAGCGCGGCTTCA
Product: potassium efflux system protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 678; Mature: 677
Protein sequence:
>678_residues MPHETPLIATLVGAFVLAFVFGAIAQRFKLSPLVGYLLAGVMVGPFTPGFVADQSMALELAEIGVILLMFGVGLHFSLSD LLSVKAIAIPGAVLQIGVATLMGMGLAYALGWGLGAGIVFGLALSVASTVVLLRALQERRMVESEQGRIAVGWLIVEDLA MVLALVLLPALSGALGGRVVATPTVEWLGGDDVWMTLGITLAKVAGFVVLMLVVGRRVIPGIMHWVAHIGSRELFRLAVL AIALGVAFGSAKLFGVSFALGAFFAGMVLSESPLSHRAAEETLPLRDAFAVLFFVSVGMLVDPSIVIKSPIPLIITVLIV LFGKSLAAFLLVRAFGYGNITALTISASLAQIGEFSFILVALGVDLHLLPEEGRDLILAAAIISILANPFFFLALDRYRA KAVKVSTANAAAAAPAQAAADKAATAKGAEKGAEKAPPAPTLPVTAQQAHTVLVGYGRVGHLVADGLKAAGLPFLVIEDQ EDRVEELRRGDIEVIDANAASPAAITAANVAGASRLILAIPDGFEASGVLRKARQMNPGIEIIARAHSDAEVEHLRQGGA NFIIMGEREVARGMLAHVLDRSDADLAAAVQAAGVASGTEAASPSPDAPVAEVEVSPVTPPTQSIAAAGATPAPAPTMVP AGIAGPAATQPPLSAPESAPGPVPALAESAAAEQNEKG
Sequences:
>Translated_678_residues MPHETPLIATLVGAFVLAFVFGAIAQRFKLSPLVGYLLAGVMVGPFTPGFVADQSMALELAEIGVILLMFGVGLHFSLSD LLSVKAIAIPGAVLQIGVATLMGMGLAYALGWGLGAGIVFGLALSVASTVVLLRALQERRMVESEQGRIAVGWLIVEDLA MVLALVLLPALSGALGGRVVATPTVEWLGGDDVWMTLGITLAKVAGFVVLMLVVGRRVIPGIMHWVAHIGSRELFRLAVL AIALGVAFGSAKLFGVSFALGAFFAGMVLSESPLSHRAAEETLPLRDAFAVLFFVSVGMLVDPSIVIKSPIPLIITVLIV LFGKSLAAFLLVRAFGYGNITALTISASLAQIGEFSFILVALGVDLHLLPEEGRDLILAAAIISILANPFFFLALDRYRA KAVKVSTANAAAAAPAQAAADKAATAKGAEKGAEKAPPAPTLPVTAQQAHTVLVGYGRVGHLVADGLKAAGLPFLVIEDQ EDRVEELRRGDIEVIDANAASPAAITAANVAGASRLILAIPDGFEASGVLRKARQMNPGIEIIARAHSDAEVEHLRQGGA NFIIMGEREVARGMLAHVLDRSDADLAAAVQAAGVASGTEAASPSPDAPVAEVEVSPVTPPTQSIAAAGATPAPAPTMVP AGIAGPAATQPPLSAPESAPGPVPALAESAAAEQNEKG >Mature_677_residues PHETPLIATLVGAFVLAFVFGAIAQRFKLSPLVGYLLAGVMVGPFTPGFVADQSMALELAEIGVILLMFGVGLHFSLSDL LSVKAIAIPGAVLQIGVATLMGMGLAYALGWGLGAGIVFGLALSVASTVVLLRALQERRMVESEQGRIAVGWLIVEDLAM VLALVLLPALSGALGGRVVATPTVEWLGGDDVWMTLGITLAKVAGFVVLMLVVGRRVIPGIMHWVAHIGSRELFRLAVLA IALGVAFGSAKLFGVSFALGAFFAGMVLSESPLSHRAAEETLPLRDAFAVLFFVSVGMLVDPSIVIKSPIPLIITVLIVL FGKSLAAFLLVRAFGYGNITALTISASLAQIGEFSFILVALGVDLHLLPEEGRDLILAAAIISILANPFFFLALDRYRAK AVKVSTANAAAAAPAQAAADKAATAKGAEKGAEKAPPAPTLPVTAQQAHTVLVGYGRVGHLVADGLKAAGLPFLVIEDQE DRVEELRRGDIEVIDANAASPAAITAANVAGASRLILAIPDGFEASGVLRKARQMNPGIEIIARAHSDAEVEHLRQGGAN FIIMGEREVARGMLAHVLDRSDADLAAAVQAAGVASGTEAASPSPDAPVAEVEVSPVTPPTQSIAAAGATPAPAPTMVPA GIAGPAATQPPLSAPESAPGPVPALAESAAAEQNEKG
Specific function: Unknown
COG id: COG4651
COG function: function code P; Kef-type K+ transport system, predicted NAD-binding component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 RCK N-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI157388921, Length=373, Percent_Identity=27.8820375335121, Blast_Score=85, Evalue=2e-16, Organism=Escherichia coli, GI1786685, Length=575, Percent_Identity=56.1739130434783, Blast_Score=582, Evalue=1e-167, Organism=Escherichia coli, GI1786232, Length=557, Percent_Identity=27.6481149012567, Blast_Score=170, Evalue=2e-43, Organism=Escherichia coli, GI1789749, Length=555, Percent_Identity=26.6666666666667, Blast_Score=164, Evalue=1e-41,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006153 - InterPro: IPR004771 - InterPro: IPR016040 - InterPro: IPR003148 [H]
Pfam domain/function: PF00999 Na_H_Exchanger; PF02254 TrkA_N [H]
EC number: NA
Molecular weight: Translated: 69536; Mature: 69405
Theoretical pI: Translated: 5.21; Mature: 5.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPHETPLIATLVGAFVLAFVFGAIAQRFKLSPLVGYLLAGVMVGPFTPGFVADQSMALEL CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH AEIGVILLMFGVGLHFSLSDLLSVKAIAIPGAVLQIGVATLMGMGLAYALGWGLGAGIVF HHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLALSVASTVVLLRALQERRMVESEQGRIAVGWLIVEDLAMVLALVLLPALSGALGGRVV HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCEEE ATPTVEWLGGDDVWMTLGITLAKVAGFVVLMLVVGRRVIPGIMHWVAHIGSRELFRLAVL ECCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH AIALGVAFGSAKLFGVSFALGAFFAGMVLSESPLSHRAAEETLPLRDAFAVLFFVSVGML HHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHH VDPSIVIKSPIPLIITVLIVLFGKSLAAFLLVRAFGYGNITALTISASLAQIGEFSFILV CCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHCCHHHHHH ALGVDLHLLPEEGRDLILAAAIISILANPFFFLALDRYRAKAVKVSTANAAAAAPAQAAA HHCCCEEEECCCCCHHHHHHHHHHHHHCCHHEEHHHHHHHHEEEEECCCCHHCCCHHHHH DKAATAKGAEKGAEKAPPAPTLPVTAQQAHTVLVGYGRVGHLVADGLKAAGLPFLVIEDQ HHHHHHCCHHCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCCEEEEECC EDRVEELRRGDIEVIDANAASPAAITAANVAGASRLILAIPDGFEASGVLRKARQMNPGI HHHHHHHHCCCEEEEECCCCCCCCEEHHHHCCCCEEEEECCCCCCHHHHHHHHHHCCCCC EIIARAHSDAEVEHLRQGGANFIIMGEREVARGMLAHVLDRSDADLAAAVQAAGVASGTE EEEEECCCCHHHHHHHCCCCCEEEECCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCC AASPSPDAPVAEVEVSPVTPPTQSIAAAGATPAPAPTMVPAGIAGPAATQPPLSAPESAP CCCCCCCCCCEEEEECCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GPVPALAESAAAEQNEKG CCCHHHHHHHHCCCCCCC >Mature Secondary Structure PHETPLIATLVGAFVLAFVFGAIAQRFKLSPLVGYLLAGVMVGPFTPGFVADQSMALEL CCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH AEIGVILLMFGVGLHFSLSDLLSVKAIAIPGAVLQIGVATLMGMGLAYALGWGLGAGIVF HHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLALSVASTVVLLRALQERRMVESEQGRIAVGWLIVEDLAMVLALVLLPALSGALGGRVV HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCEEE ATPTVEWLGGDDVWMTLGITLAKVAGFVVLMLVVGRRVIPGIMHWVAHIGSRELFRLAVL ECCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH AIALGVAFGSAKLFGVSFALGAFFAGMVLSESPLSHRAAEETLPLRDAFAVLFFVSVGML HHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHH VDPSIVIKSPIPLIITVLIVLFGKSLAAFLLVRAFGYGNITALTISASLAQIGEFSFILV CCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHCCHHHHHH ALGVDLHLLPEEGRDLILAAAIISILANPFFFLALDRYRAKAVKVSTANAAAAAPAQAAA HHCCCEEEECCCCCHHHHHHHHHHHHHCCHHEEHHHHHHHHEEEEECCCCHHCCCHHHHH DKAATAKGAEKGAEKAPPAPTLPVTAQQAHTVLVGYGRVGHLVADGLKAAGLPFLVIEDQ HHHHHHCCHHCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCCEEEEECC EDRVEELRRGDIEVIDANAASPAAITAANVAGASRLILAIPDGFEASGVLRKARQMNPGI HHHHHHHHCCCEEEEECCCCCCCCEEHHHHCCCCEEEEECCCCCCHHHHHHHHHHCCCCC EIIARAHSDAEVEHLRQGGANFIIMGEREVARGMLAHVLDRSDADLAAAVQAAGVASGTE EEEEECCCCHHHHHHHCCCCCEEEECCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCC AASPSPDAPVAEVEVSPVTPPTQSIAAAGATPAPAPTMVPAGIAGPAATQPPLSAPESAP CCCCCCCCCCEEEEECCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GPVPALAESAAAEQNEKG CCCHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9278503; 7721718 [H]