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The map label for this gene is lhr [C]

Identifier: 154245136

GI number: 154245136

Start: 1364919

End: 1367711

Strand: Reverse

Name: lhr [C]

Synonym: Xaut_1188

Alternate gene names: 154245136

Gene position: 1367711-1364919 (Counterclockwise)

Preceding gene: 154245141

Following gene: 154245135

Centisome position: 25.76

GC content: 71.21

Gene sequence:

>2793_bases
GTGCCGCGCTCCCCACGAAAAGCCCCCAAACCCACCGCGCCCGACTCCGCCGCGCCCCCGTCGGACGCGGTGCGGCCCGG
CGCGCCTTCGCCCGATGCGCTGCCGGAGGTGTTCCAAAGCTGGTTCCGCGCGCGCGGCTGGACGGCGCGGGCGCACCAGC
TCGATCTCGTCGCCGCCGCGCAGGCCGGGCGCTCGGTGCTGCTGATTGCCCCCACTGGCGGCGGCAAGACCCTCGCCGGC
TTCCTGCCCACGCTGATCGAACTGAGCGGCGGGCGCAGGAAACGCGGGGGTGTTGCCGCTCCGAACGCTCTACCCCCTCT
GGACACCCCGCCCCCTCCGGACACCCCGCCCCCTCCCCAGGCCTCCCCCGCAAGCGGGAGAGGGAGCAAGGCCGCGCGGG
GCGTCGGCAAAGGGGAAATGGTGAATGCCGACGCCACCCCCCTGCCCTTCGCCCGCTGGCAGGCGGAGCAGCCGGCCTCG
CCGCTGCACACGCTCTATATCTCCCCGCTGAAGGCGCTGGCGGTGGACATCGCGCGCAACCTGGAGACGCCCATCAGCGA
GATGGGCCTGCCCATCCGCGTCGAGACCCGCACCGGCGACACCCCCTCCTCCCGCCGCCAAAGGCAGCGGCGCGACCCGC
CGGACATCCTGCTCACCACCCCCGAGCAGATCTCCCTGCTGCTCGCCTCGAAGGATGCCGAGCACCTCTTCAGCGGCCTG
AAGCGGGTGGTGCTGGATGAGTTGCACGCCCTCGTCACCTCCAAGCGCGGCGACCTGCTGGCGCTGGCGTTGGCGCGGTT
GCGGGCCATCGCGCCGGGGCTGCAATGCGTCGGCCTCTCCGCCACCGTGGCCGAGCCCGACGATCTTCGTCGCTATCTGG
TGGCGCAGGATGAAGGCGCCGCCACGCCCGTCCCCGGTCACGCCCCCCTTGCCGACCTGGTGGTGGCGCAGGGCGGCGTC
GCGCCCGACGTGCGGATGCTGGAAACCGACGTGCCCATGCCGTGGGCCAGCCACATGGCGCTGCATGCGGTGCGGGACAT
CTATGCGCTCTTGAAGGCGAACCGGCTCAGCCTCGTGTTCGTCAACACCCGCCGGCAGGCGGAATTCATCTTCCAGGAGC
TGTGGCGCATCAACGACGACAATCTGCCGATCGCGCTCCACCACGGCTCGCTGGCGGTGGAGCAGCGGCGCAAGGTGGAG
GCGGCCATGGCCGCCGGCCGGCTGAAGGCGGTGGTGGCTACCTCCTCCCTCGACCTCGGCATCGACTGGGGCGACGTGGA
CCTCGTCATCAATGTGGGCGCCCCCAAGGGCTCCTCACGCCTCCTCCAGCGCATCGGCCGCGCCAACCACCGGCTGGATG
AGCCCTCCCGCGCCGTGCTGGTGCCGGCCAACCGGTTCGAGGTGCTGGAATGCCGGGCGGCACTGGAGGCGGTGGCGGTC
GGCGCGCAGGATACCCCGCCGGAGCGCCTCGGCGCGCTGGACGTGCTGGCCCAGCATATCCTCGGCATGGCCTGCGCCGC
CCCCTTCGCCGCCGACGCGCTCTTTAACGAGGTGCGCTCGGCCGCGCCCTACCGGCACCTGCCCCGGGAAGACTTCGACG
CCGCCCTCCAATTCGTCGCCACCGGCGGCTACGCGCTGAAGGCCTATGAGCGCTACGCCAAGATCCGCCCCACCCGCGAC
GGCCTGTGGCGGGTGGCCAACCCCATGATCGCGCAGGCCTACCGGCTGAACGTTGGCACCATCGTGGAATCCACCATGCT
GAAAGTGCGACTGGTTTCGGCCCGCGGCGCGGCCAAGACCGGGGTCACCGGGCGGGTGCGCTTCGGCGGGCGGATGCTGG
GCGAGGTGGAGGAATATTTCGTGGAGACCATGGTGCCCGGCGACACCTTCGTCTTCGCCGGCGAGATCCTGCGCTACGAG
GTGATGGTGGAGGACGAGGTCTATGTCTCGCGCACCACCGCCACCGAGCCCAAGGTTCCGGCCTATGCCGGGGGCAAGTT
TCCCCTCTCCACCTTCCTCGCGGCGGGGGTGCGGGCGCTGCTCGCCGCCCCCGAGCGCTGGGCCGCGCTGCCGAAGCAGG
TGCGCGAGTGGCTGGAACTGCAACGCCTGCGCTCGCGCCTGCCGGGCCGCGACGACCTGCTGGTGGAAGGCTTCGTGCAA
GGCGGGCGTTATTATCTTGTCACCTACCCGTTCGAGGGCCGCCTCGCCCACCAGACCCTCGGCATGCTCTTGACGCGGCG
GCTGGAGCGGGCGCGGCTGAAGCCGCTGGGCTTCGTCGCCAACGACTATGCCCTCGCGGTCTACGCAGCCGGCGACATGG
GCGCCGCCATCGCGGGGGGCCGGCTCGCGCTGGCGGACCTGTTCGACGAGGACATGCTGGGCGACGACCTTGAGGCGTGG
CTGGCGGAAAGCGCCCTCATGAAGCGCACCTTCCGCTATTGCGCGGTGATCGCCGGGCTGATCGAGCGGAGGTTTCCGGG
AAAGGAGAAGACATCGCGGCAGGTCACCGTCTCCACCGACCTGATCTACGACGTGCTGCGCCGGCACGAGCCGGACCATC
TTCTACTGCGCGCCGCCCGGGCGGATGCCGCCACCGGCCTGCTGGACGTGAAGCGGCTCGCGCAGATGCTGGCGCGCATC
AAGGGACGCATCGTGCACATGCCGCTGGAGCGGGTGTCGCCGCTGGCGGTGCCGGTGCTGCTGGAGATCGGTCAGGAGAG
CGTGGGGGGCGAGGCAAGCGATGCGCTGCTCGCGGAGGCGGAGGAGGAACTCATCCGCGCCGCCATGGGTTGA

Upstream 100 bases:

>100_bases
TCGTTCGGCTACCGCCCGTCGCGAAAACGCCGCCGTTCAGACACGGCTTACGAGCTTCGTTACCATCGCACAACCGACCT
GTCATGCCTATCTTGAGGGG

Downstream 100 bases:

>100_bases
TCGGGGGTAGATCAGGCGGGTCTTACCGCTTCCGGCTTGGTCGCGGAACGGCGGTGGGTATCCGGAAACAGGGCGCACAA
CATCGCTCCCGCGACACGCT

Product: DEAD/DEAH box helicase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 930; Mature: 929

Protein sequence:

>930_residues
MPRSPRKAPKPTAPDSAAPPSDAVRPGAPSPDALPEVFQSWFRARGWTARAHQLDLVAAAQAGRSVLLIAPTGGGKTLAG
FLPTLIELSGGRRKRGGVAAPNALPPLDTPPPPDTPPPPQASPASGRGSKAARGVGKGEMVNADATPLPFARWQAEQPAS
PLHTLYISPLKALAVDIARNLETPISEMGLPIRVETRTGDTPSSRRQRQRRDPPDILLTTPEQISLLLASKDAEHLFSGL
KRVVLDELHALVTSKRGDLLALALARLRAIAPGLQCVGLSATVAEPDDLRRYLVAQDEGAATPVPGHAPLADLVVAQGGV
APDVRMLETDVPMPWASHMALHAVRDIYALLKANRLSLVFVNTRRQAEFIFQELWRINDDNLPIALHHGSLAVEQRRKVE
AAMAAGRLKAVVATSSLDLGIDWGDVDLVINVGAPKGSSRLLQRIGRANHRLDEPSRAVLVPANRFEVLECRAALEAVAV
GAQDTPPERLGALDVLAQHILGMACAAPFAADALFNEVRSAAPYRHLPREDFDAALQFVATGGYALKAYERYAKIRPTRD
GLWRVANPMIAQAYRLNVGTIVESTMLKVRLVSARGAAKTGVTGRVRFGGRMLGEVEEYFVETMVPGDTFVFAGEILRYE
VMVEDEVYVSRTTATEPKVPAYAGGKFPLSTFLAAGVRALLAAPERWAALPKQVREWLELQRLRSRLPGRDDLLVEGFVQ
GGRYYLVTYPFEGRLAHQTLGMLLTRRLERARLKPLGFVANDYALAVYAAGDMGAAIAGGRLALADLFDEDMLGDDLEAW
LAESALMKRTFRYCAVIAGLIERRFPGKEKTSRQVTVSTDLIYDVLRRHEPDHLLLRAARADAATGLLDVKRLAQMLARI
KGRIVHMPLERVSPLAVPVLLEIGQESVGGEASDALLAEAEEELIRAAMG

Sequences:

>Translated_930_residues
MPRSPRKAPKPTAPDSAAPPSDAVRPGAPSPDALPEVFQSWFRARGWTARAHQLDLVAAAQAGRSVLLIAPTGGGKTLAG
FLPTLIELSGGRRKRGGVAAPNALPPLDTPPPPDTPPPPQASPASGRGSKAARGVGKGEMVNADATPLPFARWQAEQPAS
PLHTLYISPLKALAVDIARNLETPISEMGLPIRVETRTGDTPSSRRQRQRRDPPDILLTTPEQISLLLASKDAEHLFSGL
KRVVLDELHALVTSKRGDLLALALARLRAIAPGLQCVGLSATVAEPDDLRRYLVAQDEGAATPVPGHAPLADLVVAQGGV
APDVRMLETDVPMPWASHMALHAVRDIYALLKANRLSLVFVNTRRQAEFIFQELWRINDDNLPIALHHGSLAVEQRRKVE
AAMAAGRLKAVVATSSLDLGIDWGDVDLVINVGAPKGSSRLLQRIGRANHRLDEPSRAVLVPANRFEVLECRAALEAVAV
GAQDTPPERLGALDVLAQHILGMACAAPFAADALFNEVRSAAPYRHLPREDFDAALQFVATGGYALKAYERYAKIRPTRD
GLWRVANPMIAQAYRLNVGTIVESTMLKVRLVSARGAAKTGVTGRVRFGGRMLGEVEEYFVETMVPGDTFVFAGEILRYE
VMVEDEVYVSRTTATEPKVPAYAGGKFPLSTFLAAGVRALLAAPERWAALPKQVREWLELQRLRSRLPGRDDLLVEGFVQ
GGRYYLVTYPFEGRLAHQTLGMLLTRRLERARLKPLGFVANDYALAVYAAGDMGAAIAGGRLALADLFDEDMLGDDLEAW
LAESALMKRTFRYCAVIAGLIERRFPGKEKTSRQVTVSTDLIYDVLRRHEPDHLLLRAARADAATGLLDVKRLAQMLARI
KGRIVHMPLERVSPLAVPVLLEIGQESVGGEASDALLAEAEEELIRAAMG
>Mature_929_residues
PRSPRKAPKPTAPDSAAPPSDAVRPGAPSPDALPEVFQSWFRARGWTARAHQLDLVAAAQAGRSVLLIAPTGGGKTLAGF
LPTLIELSGGRRKRGGVAAPNALPPLDTPPPPDTPPPPQASPASGRGSKAARGVGKGEMVNADATPLPFARWQAEQPASP
LHTLYISPLKALAVDIARNLETPISEMGLPIRVETRTGDTPSSRRQRQRRDPPDILLTTPEQISLLLASKDAEHLFSGLK
RVVLDELHALVTSKRGDLLALALARLRAIAPGLQCVGLSATVAEPDDLRRYLVAQDEGAATPVPGHAPLADLVVAQGGVA
PDVRMLETDVPMPWASHMALHAVRDIYALLKANRLSLVFVNTRRQAEFIFQELWRINDDNLPIALHHGSLAVEQRRKVEA
AMAAGRLKAVVATSSLDLGIDWGDVDLVINVGAPKGSSRLLQRIGRANHRLDEPSRAVLVPANRFEVLECRAALEAVAVG
AQDTPPERLGALDVLAQHILGMACAAPFAADALFNEVRSAAPYRHLPREDFDAALQFVATGGYALKAYERYAKIRPTRDG
LWRVANPMIAQAYRLNVGTIVESTMLKVRLVSARGAAKTGVTGRVRFGGRMLGEVEEYFVETMVPGDTFVFAGEILRYEV
MVEDEVYVSRTTATEPKVPAYAGGKFPLSTFLAAGVRALLAAPERWAALPKQVREWLELQRLRSRLPGRDDLLVEGFVQG
GRYYLVTYPFEGRLAHQTLGMLLTRRLERARLKPLGFVANDYALAVYAAGDMGAAIAGGRLALADLFDEDMLGDDLEAWL
AESALMKRTFRYCAVIAGLIERRFPGKEKTSRQVTVSTDLIYDVLRRHEPDHLLLRAARADAATGLLDVKRLAQMLARIK
GRIVHMPLERVSPLAVPVLLEIGQESVGGEASDALLAEAEEELIRAAMG

Specific function: Unknown

COG id: COG1201

COG function: function code R; Lhr-like helicases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Escherichia coli, GI1787942, Length=857, Percent_Identity=28.4714119019837, Blast_Score=219, Evalue=9e-58,
Organism=Saccharomyces cerevisiae, GI6320497, Length=308, Percent_Identity=28.2467532467532, Blast_Score=88, Evalue=5e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR013701
- InterPro:   IPR011545
- InterPro:   IPR001650
- InterPro:   IPR014021
- InterPro:   IPR017170 [H]

Pfam domain/function: PF00270 DEAD; PF08494 DEAD_assoc; PF00271 Helicase_C [H]

EC number: 3.6.1.-

Molecular weight: Translated: 100704; Mature: 100573

Theoretical pI: Translated: 9.33; Mature: 9.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRSPRKAPKPTAPDSAAPPSDAVRPGAPSPDALPEVFQSWFRARGWTARAHQLDLVAAA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
QAGRSVLLIAPTGGGKTLAGFLPTLIELSGGRRKRGGVAAPNALPPLDTPPPPDTPPPPQ
HCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
ASPASGRGSKAARGVGKGEMVNADATPLPFARWQAEQPASPLHTLYISPLKALAVDIARN
CCCCCCCCCHHHCCCCCCCEECCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH
LETPISEMGLPIRVETRTGDTPSSRRQRQRRDPPDILLTTPEQISLLLASKDAEHLFSGL
CCCCHHHCCCCEEEEECCCCCCHHHHHHHHCCCCCEEEECHHHHEEEHHCCCHHHHHHHH
KRVVLDELHALVTSKRGDLLALALARLRAIAPGLQCVGLSATVAEPDDLRRYLVAQDEGA
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHCCCCCC
ATPVPGHAPLADLVVAQGGVAPDVRMLETDVPMPWASHMALHAVRDIYALLKANRLSLVF
CCCCCCCCCHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEE
VNTRRQAEFIFQELWRINDDNLPIALHHGSLAVEQRRKVEAAMAAGRLKAVVATSSLDLG
EECCHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHEEEEEECCCCCC
IDWGDVDLVINVGAPKGSSRLLQRIGRANHRLDEPSRAVLVPANRFEVLECRAALEAVAV
CCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHC
GAQDTPPERLGALDVLAQHILGMACAAPFAADALFNEVRSAAPYRHLPREDFDAALQFVA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
TGGYALKAYERYAKIRPTRDGLWRVANPMIAQAYRLNVGTIVESTMLKVRLVSARGAAKT
CCCHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHCCHHHHHHHHHHEEEEEECCCCCCC
GVTGRVRFGGRMLGEVEEYFVETMVPGDTFVFAGEILRYEVMVEDEVYVSRTTATEPKVP
CCCEEEECCCHHHHHHHHHHHHHCCCCCCEEEECCEEEEEEEEECCEEEEECCCCCCCCC
AYAGGKFPLSTFLAAGVRALLAAPERWAALPKQVREWLELQRLRSRLPGRDDLLVEGFVQ
CCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHC
GGRYYLVTYPFEGRLAHQTLGMLLTRRLERARLKPLGFVANDYALAVYAAGDMGAAIAGG
CCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCEEECCEEEEEEECCCCCCHHCCC
RLALADLFDEDMLGDDLEAWLAESALMKRTFRYCAVIAGLIERRFPGKEKTSRQVTVSTD
CCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEHHH
LIYDVLRRHEPDHLLLRAARADAATGLLDVKRLAQMLARIKGRIVHMPLERVSPLAVPVL
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECHHHCCCHHHHHH
LEIGQESVGGEASDALLAEAEEELIRAAMG
HHHCCHHCCCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PRSPRKAPKPTAPDSAAPPSDAVRPGAPSPDALPEVFQSWFRARGWTARAHQLDLVAAA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
QAGRSVLLIAPTGGGKTLAGFLPTLIELSGGRRKRGGVAAPNALPPLDTPPPPDTPPPPQ
HCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
ASPASGRGSKAARGVGKGEMVNADATPLPFARWQAEQPASPLHTLYISPLKALAVDIARN
CCCCCCCCCHHHCCCCCCCEECCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH
LETPISEMGLPIRVETRTGDTPSSRRQRQRRDPPDILLTTPEQISLLLASKDAEHLFSGL
CCCCHHHCCCCEEEEECCCCCCHHHHHHHHCCCCCEEEECHHHHEEEHHCCCHHHHHHHH
KRVVLDELHALVTSKRGDLLALALARLRAIAPGLQCVGLSATVAEPDDLRRYLVAQDEGA
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHCCCCCC
ATPVPGHAPLADLVVAQGGVAPDVRMLETDVPMPWASHMALHAVRDIYALLKANRLSLVF
CCCCCCCCCHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEE
VNTRRQAEFIFQELWRINDDNLPIALHHGSLAVEQRRKVEAAMAAGRLKAVVATSSLDLG
EECCHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHEEEEEECCCCCC
IDWGDVDLVINVGAPKGSSRLLQRIGRANHRLDEPSRAVLVPANRFEVLECRAALEAVAV
CCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHC
GAQDTPPERLGALDVLAQHILGMACAAPFAADALFNEVRSAAPYRHLPREDFDAALQFVA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
TGGYALKAYERYAKIRPTRDGLWRVANPMIAQAYRLNVGTIVESTMLKVRLVSARGAAKT
CCCHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHCCHHHHHHHHHHEEEEEECCCCCCC
GVTGRVRFGGRMLGEVEEYFVETMVPGDTFVFAGEILRYEVMVEDEVYVSRTTATEPKVP
CCCEEEECCCHHHHHHHHHHHHHCCCCCCEEEECCEEEEEEEEECCEEEEECCCCCCCCC
AYAGGKFPLSTFLAAGVRALLAAPERWAALPKQVREWLELQRLRSRLPGRDDLLVEGFVQ
CCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHC
GGRYYLVTYPFEGRLAHQTLGMLLTRRLERARLKPLGFVANDYALAVYAAGDMGAAIAGG
CCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCEEECCEEEEEEECCCCCCHHCCC
RLALADLFDEDMLGDDLEAWLAESALMKRTFRYCAVIAGLIERRFPGKEKTSRQVTVSTD
CCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEHHH
LIYDVLRRHEPDHLLLRAARADAATGLLDVKRLAQMLARIKGRIVHMPLERVSPLAVPVL
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECHHHCCCHHHHHH
LEIGQESVGGEASDALLAEAEEELIRAAMG
HHHCCHHCCCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on acid anhydrides [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]