| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is 154245122
Identifier: 154245122
GI number: 154245122
Start: 1350738
End: 1351166
Strand: Direct
Name: 154245122
Synonym: Xaut_1174
Alternate gene names: NA
Gene position: 1350738-1351166 (Clockwise)
Preceding gene: 154245120
Following gene: 154245123
Centisome position: 25.44
GC content: 63.4
Gene sequence:
>429_bases ATGAGTGAGCTTTTCGCCGTATGTGCCACCTATGAGGTCGATGACGGCGACGCGCGCGGCTTCGTGCTGGCGCGGCTGGA CGAGAATGGCGCCGTCAAGAGGTGGCCCATCCTCATCGCCCGCCAGTCCAAGAATTATTACGGCTACGAGAATGCCTGCC CCCACGAGGGCACGCGCCTGGACCTGGTGCCGGGGGAGTTTCTCGACCGGGAGGGCAACTTCCTCACGTGCGGCCGGCAC GGGGCGAAGTTTGATTTCGACACCGGCCATTGCTTCATCGGCCCCTGCCAGGGCAAGGCGCTGACGCCCATCAAGCTCGT CATCGACGATGGCGACGTGTGCCTGGTGGATGTCGAGCTGGCCGAAGAAGACGGACTAGACATTGAGGACCCCAACGAGG TCCCCGAGGTCCTGATCACGGGCGATTGA
Upstream 100 bases:
>100_bases AACCCGACAATTCCCCGTGGCACCGATCTTGCAGGGGAGTGGGCCTCTGTCCGCTTCCCGCCAAGGGGGGCGCCTAGCAC GTCCGGGGAAGGCGCGGTCC
Downstream 100 bases:
>100_bases CGCGGGCCCCACGGCCCGCCGACCAGAGGTCGCGCCCCTCGGGCGCGGCAGACCGCGACGGTGCGGTCCGCGCGGCACTC CCTGCCGCCGCGGGCGAGCG
Product: Rieske (2Fe-2S) domain-containing protein
Products: NA
Alternate protein names: Rieske Domain Protein; Rieske; Rieske 2Fe-2S Family Protein; Rieske Iron-Sulfur Domain Protein; Rieske Region; Ferredoxin Protein; Rieske Protein; Ferredoxin; Nitrite Reductase Ferredoxin Subunit; Rieske Iron-Sulfur Domain-Containing Protein
Number of amino acids: Translated: 142; Mature: 141
Protein sequence:
>142_residues MSELFAVCATYEVDDGDARGFVLARLDENGAVKRWPILIARQSKNYYGYENACPHEGTRLDLVPGEFLDREGNFLTCGRH GAKFDFDTGHCFIGPCQGKALTPIKLVIDDGDVCLVDVELAEEDGLDIEDPNEVPEVLITGD
Sequences:
>Translated_142_residues MSELFAVCATYEVDDGDARGFVLARLDENGAVKRWPILIARQSKNYYGYENACPHEGTRLDLVPGEFLDREGNFLTCGRH GAKFDFDTGHCFIGPCQGKALTPIKLVIDDGDVCLVDVELAEEDGLDIEDPNEVPEVLITGD >Mature_141_residues SELFAVCATYEVDDGDARGFVLARLDENGAVKRWPILIARQSKNYYGYENACPHEGTRLDLVPGEFLDREGNFLTCGRHG AKFDFDTGHCFIGPCQGKALTPIKLVIDDGDVCLVDVELAEEDGLDIEDPNEVPEVLITGD
Specific function: Unknown
COG id: COG2146
COG function: function code PR; Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15624; Mature: 15492
Theoretical pI: Translated: 4.04; Mature: 4.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.2 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 4.3 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSELFAVCATYEVDDGDARGFVLARLDENGAVKRWPILIARQSKNYYGYENACPHEGTRL CCCCEEEEEEEEECCCCCCEEEEEEECCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCEE DLVPGEFLDREGNFLTCGRHGAKFDFDTGHCFIGPCQGKALTPIKLVIDDGDVCLVDVEL EECCCHHHCCCCCEEEECCCCCEEECCCCCEEEEECCCCCCCEEEEEEECCCEEEEEEEE AEEDGLDIEDPNEVPEVLITGD CCCCCCCCCCCCCCCEEEEECC >Mature Secondary Structure SELFAVCATYEVDDGDARGFVLARLDENGAVKRWPILIARQSKNYYGYENACPHEGTRL CCCEEEEEEEEECCCCCCEEEEEEECCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCEE DLVPGEFLDREGNFLTCGRHGAKFDFDTGHCFIGPCQGKALTPIKLVIDDGDVCLVDVEL EECCCHHHCCCCCEEEECCCCCEEECCCCCEEEEECCCCCCCEEEEEEECCCEEEEEEEE AEEDGLDIEDPNEVPEVLITGD CCCCCCCCCCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA