| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is 154245108
Identifier: 154245108
GI number: 154245108
Start: 1333475
End: 1335175
Strand: Direct
Name: 154245108
Synonym: Xaut_1160
Alternate gene names: NA
Gene position: 1333475-1335175 (Clockwise)
Preceding gene: 154245107
Following gene: 154245109
Centisome position: 25.12
GC content: 73.66
Gene sequence:
>1701_bases ATGGAGGCACGAGAGACGCCTATGGCGAGCGACGATCCGAAGGCGGAGGGCTTCGCGTCCCGCCCGTCCCGCACCCCGCC CACGCTGGACCTGAAGGCCGAGGAGGTCGCGACCGCCTCGGGCGCGCCCGGTGCGACCGCAGCCCAGGACACTGGCGCAA AGAGCATTCCGGCCCCGGCTACCGGCGCGCCGCAGTCGGGCACTGACCCGAAGGCCGCAGGGACCGCCGGCAAGCCGGCC GACACCAAGCCGGTGGAAACGAAGCCGGGGGAATCCAGGCCGGCTCCGTCCATGCCGGTGGAGCCCAAAGCGGCTGACCC TAAGCCCTCCACCACCCCATCGACCGGGCCGAAGCTGTCGGATGCCAAGCCGTCCGACGCCAAGCCGTCCGACGCCAAGC CGTCCGACACCAAGCCGTCCGACACCAAGGCGGCGGGATCGAAGCCGGGCGAGGCCGCGGCCTCCGGCGAATCGGCGCCC GTCGCTGCTGCCACGGCCTCCACTCCCGTTCCGCCCGCACCTGCACCGGCCCGTTCGGGCAATGGCGGGGCGGTGTTTGC CGGCCTGATCGCCGGCATCATCGGCGGTGGCGCCGTGGCCGGTGGCCTGTGGTATGCGCTTCCGCAATTCTTTCCGGCGC CCGCTCCCGTGGTGGAGCCAGCCCCGGTGGTGAACCTGACGCCGCTGCAGAACCGCATCGCCGCCATCGAGGCCCGCCCG GCCTTCGATCCGCGCGCCATCGCCGCCTTGTCCGAGCGGCTGGAGCGCAGCGAGGCGACCCTGAAATCGCTTGAAGCCAC GGTGGCGGCGCTGAAGTCCACGCCGGCCCCGACCGGCGCAGCCGCCCCGGCTCAGGCTCAGGCCCCCGCGACCGCGGTGC CGCCGGCCCTGTTGAAAACGGTGGATGACCTGAAGGCGAGCAGCGAGGCGACGCGGGACGCGCTCGCCACCGCCCGCCGC GACATCGAGGCCCTGCGCACGGTGGAGAGCAACCTCCATACGGCGGTGGCCGCCGCTACCGCCGGTGCCCAGCAGGCCGG CGCCCAGGCCCAGGCGCAGGTTCAGGCCCTTGCGCAGTCCCTCACCCCCAAGGTGGAGGCTGTCGGCCCGCGCCTCGATG CGCTGAAGGCGCAGATCGAGGAGGCGACTGCCGCCGCCACCGCCTTCAACCGCGCCGCCGCCGGCCTCGTTGTGCTCTCC ACCTTCCGCGATGCGGTGGTCTCCGGCCGTCCCTTCGCGGCCGAGCTTGCCGCCGCCCGCACCACGCTGGGGCCGGCCGC CGGCCAGCTCGATCCGTTCGCCCCCGCTGCGGCGACGGGCTATGCGGCGCCGGCAAAGCTCGCCGCCACGCTGGCGCAGC AGGGCGCCGCCGCCATCGCCGCCGAGCGCCCCGCGCCCGCGCCGGTGGATTCGTCCGCCTCGCTGGTGGACCGGCTGCTG TCCTCGGCCGAGAGCCTGGTGAAGGTGCGCCCGGTCACGGGTCCCGGCTCGGTGGATCTGGAAGGCCTGATTGCCACCGC CGTCGGCCAGGTGAAGGCCGGCCAGCTGGATGATGCCCTCATCACGCTCAAGAAGCTGCCGGATCCGGTGCAGGCCCGCC TTGCCGTGATCCGCGAGATCGAGGCGCGCACCGCTGCGGTGCGTGTCGCCGGGACGCTCTACCAGCAGCAGCTCGCCGCC ATTTCGAGGAAGGTGCCGTGA
Upstream 100 bases:
>100_bases CCTGCTGTGATGGCATGTGACATGACCTCGCGTAGCGGGGCTGTTGCGGTGCGACGCGGGGCGGTTTATCCGGAACCGGT ACAGCGGATCCGAACTCACG
Downstream 100 bases:
>100_bases TCCGCCTCGTCCTATTCCTGCTCCTGCTCGTCGCCATCACCTTCGGCGTCTCCTGGCTGGCCGACCGGCCGGGCGAGGTG ACGGTGGTGTGGGAAGGCGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 566; Mature: 566
Protein sequence:
>566_residues MEARETPMASDDPKAEGFASRPSRTPPTLDLKAEEVATASGAPGATAAQDTGAKSIPAPATGAPQSGTDPKAAGTAGKPA DTKPVETKPGESRPAPSMPVEPKAADPKPSTTPSTGPKLSDAKPSDAKPSDAKPSDTKPSDTKAAGSKPGEAAASGESAP VAAATASTPVPPAPAPARSGNGGAVFAGLIAGIIGGGAVAGGLWYALPQFFPAPAPVVEPAPVVNLTPLQNRIAAIEARP AFDPRAIAALSERLERSEATLKSLEATVAALKSTPAPTGAAAPAQAQAPATAVPPALLKTVDDLKASSEATRDALATARR DIEALRTVESNLHTAVAAATAGAQQAGAQAQAQVQALAQSLTPKVEAVGPRLDALKAQIEEATAAATAFNRAAAGLVVLS TFRDAVVSGRPFAAELAAARTTLGPAAGQLDPFAPAAATGYAAPAKLAATLAQQGAAAIAAERPAPAPVDSSASLVDRLL SSAESLVKVRPVTGPGSVDLEGLIATAVGQVKAGQLDDALITLKKLPDPVQARLAVIREIEARTAAVRVAGTLYQQQLAA ISRKVP
Sequences:
>Translated_566_residues MEARETPMASDDPKAEGFASRPSRTPPTLDLKAEEVATASGAPGATAAQDTGAKSIPAPATGAPQSGTDPKAAGTAGKPA DTKPVETKPGESRPAPSMPVEPKAADPKPSTTPSTGPKLSDAKPSDAKPSDAKPSDTKPSDTKAAGSKPGEAAASGESAP VAAATASTPVPPAPAPARSGNGGAVFAGLIAGIIGGGAVAGGLWYALPQFFPAPAPVVEPAPVVNLTPLQNRIAAIEARP AFDPRAIAALSERLERSEATLKSLEATVAALKSTPAPTGAAAPAQAQAPATAVPPALLKTVDDLKASSEATRDALATARR DIEALRTVESNLHTAVAAATAGAQQAGAQAQAQVQALAQSLTPKVEAVGPRLDALKAQIEEATAAATAFNRAAAGLVVLS TFRDAVVSGRPFAAELAAARTTLGPAAGQLDPFAPAAATGYAAPAKLAATLAQQGAAAIAAERPAPAPVDSSASLVDRLL SSAESLVKVRPVTGPGSVDLEGLIATAVGQVKAGQLDDALITLKKLPDPVQARLAVIREIEARTAAVRVAGTLYQQQLAA ISRKVP >Mature_566_residues MEARETPMASDDPKAEGFASRPSRTPPTLDLKAEEVATASGAPGATAAQDTGAKSIPAPATGAPQSGTDPKAAGTAGKPA DTKPVETKPGESRPAPSMPVEPKAADPKPSTTPSTGPKLSDAKPSDAKPSDAKPSDTKPSDTKAAGSKPGEAAASGESAP VAAATASTPVPPAPAPARSGNGGAVFAGLIAGIIGGGAVAGGLWYALPQFFPAPAPVVEPAPVVNLTPLQNRIAAIEARP AFDPRAIAALSERLERSEATLKSLEATVAALKSTPAPTGAAAPAQAQAPATAVPPALLKTVDDLKASSEATRDALATARR DIEALRTVESNLHTAVAAATAGAQQAGAQAQAQVQALAQSLTPKVEAVGPRLDALKAQIEEATAAATAFNRAAAGLVVLS TFRDAVVSGRPFAAELAAARTTLGPAAGQLDPFAPAAATGYAAPAKLAATLAQQGAAAIAAERPAPAPVDSSASLVDRLL SSAESLVKVRPVTGPGSVDLEGLIATAVGQVKAGQLDDALITLKKLPDPVQARLAVIREIEARTAAVRVAGTLYQQQLAA ISRKVP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56182; Mature: 56182
Theoretical pI: Translated: 8.78; Mature: 8.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 0.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEARETPMASDDPKAEGFASRPSRTPPTLDLKAEEVATASGAPGATAAQDTGAKSIPAPA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCC TGAPQSGTDPKAAGTAGKPADTKPVETKPGESRPAPSMPVEPKAADPKPSTTPSTGPKLS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DAKPSDAKPSDAKPSDTKPSDTKAAGSKPGEAAASGESAPVAAATASTPVPPAPAPARSG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCEEEECCCCCCCCCCCCCCCC NGGAVFAGLIAGIIGGGAVAGGLWYALPQFFPAPAPVVEPAPVVNLTPLQNRIAAIEARP CCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCHHHHHHHEECCC AFDPRAIAALSERLERSEATLKSLEATVAALKSTPAPTGAAAPAQAQAPATAVPPALLKT CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHH VDDLKASSEATRDALATARRDIEALRTVESNLHTAVAAATAGAQQAGAQAQAQVQALAQS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCHHHHHHHHHHHHH LTPKVEAVGPRLDALKAQIEEATAAATAFNRAAAGLVVLSTFRDAVVSGRPFAAELAAAR HCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH TTLGPAAGQLDPFAPAAATGYAAPAKLAATLAQQGAAAIAAERPAPAPVDSSASLVDRLL HHCCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHCHHHHHCCCCCCCCCCCHHHHHHHHH SSAESLVKVRPVTGPGSVDLEGLIATAVGQVKAGQLDDALITLKKLPDPVQARLAVIREI HHHHHHEEEECCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHH EARTAAVRVAGTLYQQQLAAISRKVP HHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MEARETPMASDDPKAEGFASRPSRTPPTLDLKAEEVATASGAPGATAAQDTGAKSIPAPA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCC TGAPQSGTDPKAAGTAGKPADTKPVETKPGESRPAPSMPVEPKAADPKPSTTPSTGPKLS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DAKPSDAKPSDAKPSDTKPSDTKAAGSKPGEAAASGESAPVAAATASTPVPPAPAPARSG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCEEEECCCCCCCCCCCCCCCC NGGAVFAGLIAGIIGGGAVAGGLWYALPQFFPAPAPVVEPAPVVNLTPLQNRIAAIEARP CCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCHHHHHHHEECCC AFDPRAIAALSERLERSEATLKSLEATVAALKSTPAPTGAAAPAQAQAPATAVPPALLKT CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHH VDDLKASSEATRDALATARRDIEALRTVESNLHTAVAAATAGAQQAGAQAQAQVQALAQS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCHHHHHHHHHHHHH LTPKVEAVGPRLDALKAQIEEATAAATAFNRAAAGLVVLSTFRDAVVSGRPFAAELAAAR HCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH TTLGPAAGQLDPFAPAAATGYAAPAKLAATLAQQGAAAIAAERPAPAPVDSSASLVDRLL HHCCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHCHHHHHCCCCCCCCCCCHHHHHHHHH SSAESLVKVRPVTGPGSVDLEGLIATAVGQVKAGQLDDALITLKKLPDPVQARLAVIREI HHHHHHEEEECCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHH EARTAAVRVAGTLYQQQLAAISRKVP HHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA