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The map label for this gene is mdtA [H]

Identifier: 154245052

GI number: 154245052

Start: 1276249

End: 1277265

Strand: Reverse

Name: mdtA [H]

Synonym: Xaut_1104

Alternate gene names: 154245052

Gene position: 1277265-1276249 (Counterclockwise)

Preceding gene: 154245053

Following gene: 154245051

Centisome position: 24.06

GC content: 72.57

Gene sequence:

>1017_bases
ATGCACCTGCCCTCCCTCGCGGTCCTCGCCGCGCTCGTTGCCGCTCCCCTCGCCGCCTCCGCCGCTGCGGCGGAGGATTT
CACCGTGCGCCTGGAACAGGTGCCGGAACTGAAAGCCGTGTTCGGCGAGGTGGAGAGCCGCACCGTGGTGCCCGCCCGCG
CCCGCATCGGCGGCACCCTCAGAACGGTGTCGGTCACCGAGGGCAGCCAGGTGAAGGAGGGCGACGAGATCGCCCTGGTG
GTGGACGACAAGCTCGCCCTCACCCTCAATGCCGCGGACGCCAAGATCAAGGAGCTGCGGTCCCAGCTCGAGAACGCCCG
CGTCGAGCTGGACCGCACCCAGCAGCTGGTGGCCAAGGGCGTCGCCAGCCAGAGCCGGCTCGACACCGGCAAGACCCAGT
TCGACGTGGCCACCAACCAGGTCACCGCCGCCGAGGCCGACCGCGCCGTGGTGCTCCAGCGTGCCCGTGAGGGCGCCGTG
CTGGCCCCGGCGGACGGACGCGTCCTCACCGTTCCGGTGACGCCGGGCAGCGTGGTGCTGGCCGGCGACGAGATCGCCCG
CATCGCCTCCGGCCCCTATTACCTGCGCCTCAGCCTGCCCGAGCGCCACGCCGCCGACATCCGCGAGGGCGGCACGGTCC
GCATCGGCCGGCGCGGCATCACGCAGGATACGGCCGGGACGCCGGCCACCGCCCGCCTTGGCCGGGTGGTGAAGGTCTAT
CCGGAGATCACCGCCGGCCGCGTCATGGCCGACGTGGAGGTGGACGGCCTCGGCGACTATTTCGTCAACGAGCGCACTTT
GGTGTGGGTGGAGATCGGCCGCCGCGCCGTGCTCGCCATCCCTCCTGCCTTGGTCTCGACCCGCCACGGCATCGACTATG
TGCGCGTTGCCACGCCGCGCGGGGCGCTCGATGTGCCCGTGGTGCTGGGCGCCCGCCTCACCGACGCTGCCGGGGAGCGG
GTGGAGGTGCTCACCGGCCTTGCCGACGGCGACAAGATCCAGGCGCCGGGGCACTGA

Upstream 100 bases:

>100_bases
CTGCCCGGCCGCCATGGTGCTGAAGAAGCTGGGCCTGAAGCCCGGCGTCGCCTTCTCCTGAGCCCGCGCCCGGCGCCGGC
CGGGCTGAAGAGACCTTAAG

Downstream 100 bases:

>100_bases
CATGACCAGCAAGACCTCCTCCCTCGGCCTCGCCGGCGTGCTGACGCGCGCCTTCATCACCTCGCCGCTGACGCCGCTGC
TGCTCATCGCCGCCTTCGCC

Product: RND family efflux transporter MFP subunit

Products: NA

Alternate protein names: Multidrug transporter mdtA [H]

Number of amino acids: Translated: 338; Mature: 338

Protein sequence:

>338_residues
MHLPSLAVLAALVAAPLAASAAAAEDFTVRLEQVPELKAVFGEVESRTVVPARARIGGTLRTVSVTEGSQVKEGDEIALV
VDDKLALTLNAADAKIKELRSQLENARVELDRTQQLVAKGVASQSRLDTGKTQFDVATNQVTAAEADRAVVLQRAREGAV
LAPADGRVLTVPVTPGSVVLAGDEIARIASGPYYLRLSLPERHAADIREGGTVRIGRRGITQDTAGTPATARLGRVVKVY
PEITAGRVMADVEVDGLGDYFVNERTLVWVEIGRRAVLAIPPALVSTRHGIDYVRVATPRGALDVPVVLGARLTDAAGER
VEVLTGLADGDKIQAPGH

Sequences:

>Translated_338_residues
MHLPSLAVLAALVAAPLAASAAAAEDFTVRLEQVPELKAVFGEVESRTVVPARARIGGTLRTVSVTEGSQVKEGDEIALV
VDDKLALTLNAADAKIKELRSQLENARVELDRTQQLVAKGVASQSRLDTGKTQFDVATNQVTAAEADRAVVLQRAREGAV
LAPADGRVLTVPVTPGSVVLAGDEIARIASGPYYLRLSLPERHAADIREGGTVRIGRRGITQDTAGTPATARLGRVVKVY
PEITAGRVMADVEVDGLGDYFVNERTLVWVEIGRRAVLAIPPALVSTRHGIDYVRVATPRGALDVPVVLGARLTDAAGER
VEVLTGLADGDKIQAPGH
>Mature_338_residues
MHLPSLAVLAALVAAPLAASAAAAEDFTVRLEQVPELKAVFGEVESRTVVPARARIGGTLRTVSVTEGSQVKEGDEIALV
VDDKLALTLNAADAKIKELRSQLENARVELDRTQQLVAKGVASQSRLDTGKTQFDVATNQVTAAEADRAVVLQRAREGAV
LAPADGRVLTVPVTPGSVVLAGDEIARIASGPYYLRLSLPERHAADIREGGTVRIGRRGITQDTAGTPATARLGRVVKVY
PEITAGRVMADVEVDGLGDYFVNERTLVWVEIGRRAVLAIPPALVSTRHGIDYVRVATPRGALDVPVVLGARLTDAAGER
VEVLTGLADGDKIQAPGH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]

Homologues:

Organism=Escherichia coli, GI87082036, Length=197, Percent_Identity=28.4263959390863, Blast_Score=62, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022824
- InterPro:   IPR006143 [H]

Pfam domain/function: PF00529 HlyD [H]

EC number: NA

Molecular weight: Translated: 35623; Mature: 35623

Theoretical pI: Translated: 6.18; Mature: 6.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHLPSLAVLAALVAAPLAASAAAAEDFTVRLEQVPELKAVFGEVESRTVVPARARIGGTL
CCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEHHCCHHHHHHHCCCCCEECCCHHHCCCEE
RTVSVTEGSQVKEGDEIALVVDDKLALTLNAADAKIKELRSQLENARVELDRTQQLVAKG
EEEEECCCCCCCCCCEEEEEEECCEEEEEECCHHHHHHHHHHHHHCEEEHHHHHHHHHHH
VASQSRLDTGKTQFDVATNQVTAAEADRAVVLQRAREGAVLAPADGRVLTVPVTPGSVVL
HCCHHHCCCCCEEEEEECCEEEHHCCCHHHHHHHHCCCCEECCCCCEEEEEEECCCCEEE
AGDEIARIASGPYYLRLSLPERHAADIREGGTVRIGRRGITQDTAGTPATARLGRVVKVY
ECCHHHHHCCCCEEEEEECCCHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHCCEEEEC
PEITAGRVMADVEVDGLGDYFVNERTLVWVEIGRRAVLAIPPALVSTRHGIDYVRVATPR
CCCCCCEEEEEEEECCCCCCEECCCEEEEEEECCEEEEEECHHHHHHCCCCCEEEEECCC
GALDVPVVLGARLTDAAGERVEVLTGLADGDKIQAPGH
CCCCCCEEECCEECCCCCCEEEEEECCCCCCEECCCCC
>Mature Secondary Structure
MHLPSLAVLAALVAAPLAASAAAAEDFTVRLEQVPELKAVFGEVESRTVVPARARIGGTL
CCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEHHCCHHHHHHHCCCCCEECCCHHHCCCEE
RTVSVTEGSQVKEGDEIALVVDDKLALTLNAADAKIKELRSQLENARVELDRTQQLVAKG
EEEEECCCCCCCCCCEEEEEEECCEEEEEECCHHHHHHHHHHHHHCEEEHHHHHHHHHHH
VASQSRLDTGKTQFDVATNQVTAAEADRAVVLQRAREGAVLAPADGRVLTVPVTPGSVVL
HCCHHHCCCCCEEEEEECCEEEHHCCCHHHHHHHHCCCCEECCCCCEEEEEEECCCCEEE
AGDEIARIASGPYYLRLSLPERHAADIREGGTVRIGRRGITQDTAGTPATARLGRVVKVY
ECCHHHHHCCCCEEEEEECCCHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHCCEEEEC
PEITAGRVMADVEVDGLGDYFVNERTLVWVEIGRRAVLAIPPALVSTRHGIDYVRVATPR
CCCCCCEEEEEEEECCCCCCEECCCEEEEEEECCEEEEEECHHHHHHCCCCCEEEEECCC
GALDVPVVLGARLTDAAGERVEVLTGLADGDKIQAPGH
CCCCCCEEECCEECCCCCCEEEEEECCCCCCEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA