Click here to switch to the map view.

The map label for this gene is 154245017

Identifier: 154245017

GI number: 154245017

Start: 1224676

End: 1226265

Strand: Direct

Name: 154245017

Synonym: Xaut_1068

Alternate gene names: NA

Gene position: 1224676-1226265 (Clockwise)

Preceding gene: 154245016

Following gene: 154245018

Centisome position: 23.07

GC content: 69.31

Gene sequence:

>1590_bases
ATGGCTAGGACACCGCGACCCTCCGCCGAGCCCAAGCCGCGTCGGCGCGCATCGCCACGCAGCACGGGCGGTGCCGCGGC
CGGACCCGCGGCGGATGCGGCCGCCGCCAAGCCCGGCTTCACCGTCCGGCACTATTGCCAGGGCATCGGCGACTGCCATC
TGCTCAGCTTCCCGCGCGAGGATGGGGGCCGCTATTTCATCTTGATCGACTGCGGCGTCCACTCCGGTGTCTCCGGTGGC
GCCGACAAGATCCGCGAGGTCGTCGCCGACATCGCCACCGTGACCAAGCGCATCGATCTCCTGGTGGTGACGCACGAGCA
TTGGGACCATGTCTCCGGCTTTATGAGCGCCGCGGACGCCTTCGCGGCGATCCATGTGGAGGATGTCTGGTTCGCCTGGA
CCGAGGATTCGAACGACGCGCTGGCGCGCGACTTCGACACCTACCGAGGCCAGGCGCTCGCCGCTCTGCAGATGGCCAGC
AGCCGATTGGCGGGCCTGAGCGGCGCTGACGCCTCTCTCGGTACACTGGGGCGCGAGCTCGGGCAGGTCCTCGGCTTCCA
TTTCGGCGCGGCCGGCGACAAGGTCCGCAAGGCCCGCAATGCTGCCCGCGACATGGCCAAGGGCAAGGTGGTGTATCAGC
AGCCGGGCGCCGGACCGCTCGCCCTTCCCGGCGTGTCCGGCGTGAAGGTCTATGTGCTCGGCCCGCCGCGCGACCCCAAA
GCGCTCGGTCTCGAGGAGCGTGACAGCGAACTCTACGGCCAGGGCCTCGCCGGCGGCTTCGGGATGGCGATGGCTCAGGC
CCTGATGGGATACGCGGCCGGCAGCTCCGCCGAGGACGACGGCTCACCCTTCGATCCGGAGATCGGCCATTCCCTCGCCG
AGATCCTGCCTCTCGCCAGCGGCCCGGCCACGCCGAAGCCGGGCGACCTCGCCGTCGCGCGCGCCGCCCCGCTCGTGCAA
CTGCTCCACGCCCACTACAGCGGGCCGGCAGATGCCTCCGCCGTCGCGCGTGGCAAGAAGGCGACCGCCCCGACCGTGAG
CGACCAGGGCTGGCGCCGGATCGATGGCGACTGGCTCGGCCTTGCCGCCGATCTCGCCATGCAGCTCGACCGGGGAGTCA
ACAACACCAGCCTCGTCCTCGCCTTTGAGTTCGGGGACCGTCGCGTCGCACTCTTCGTCGGCGACGCGCAGGTCGGGAAC
TGGCTTTCCTGGCAGGGTCTGACCTGGGGCGCGGGCGAGAGCGCCGTGACCGGCCCCGACCTGCTGAAGCGCACCGTCTA
TCTGAAGGTCGGGCACCATGGCAGCCACAATGCGACCCTGAAGGCGAAAGGGCTGGAGCTGATGAACCATCCCGATCTCT
CGGCCTTCATTCCGGTCAATCAGTTGGATGCCAAGAATATCGGTTGGAATCAGATGCCGTTCGCCGGCATCCTCGACGCG
CTCAGGGTCCACGCGGGTGCCCGGGTGGTGCGGGCCGACGACGACTGGCTGGCAGACTGCGTGGTCCCTCCGGCATTGGC
CGGCGGCGGGGGATCCCTGCGCGCGGTGCGCTGCCGGGCAAAATTATGGGTCGAGTTCGATGTTGCGTAG

Upstream 100 bases:

>100_bases
CAGGGGGCGAACCACCTCTCGCCCCTGCGCGCGCTCTATTTCAGCGGCATGGCCCGCGAGCCCTTCGCGATGATGCATGC
CGACCGCGGAGAGCACGATC

Downstream 100 bases:

>100_bases
CCGGTCGGTTCGTCCGACCGAACTCACGACGGGGACTTCTGCACCACAATCGCACAAGGTCTCAGGGGCCTCGCAGCACA
CCCATTAAACGCACGTCAGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 529; Mature: 528

Protein sequence:

>529_residues
MARTPRPSAEPKPRRRASPRSTGGAAAGPAADAAAAKPGFTVRHYCQGIGDCHLLSFPREDGGRYFILIDCGVHSGVSGG
ADKIREVVADIATVTKRIDLLVVTHEHWDHVSGFMSAADAFAAIHVEDVWFAWTEDSNDALARDFDTYRGQALAALQMAS
SRLAGLSGADASLGTLGRELGQVLGFHFGAAGDKVRKARNAARDMAKGKVVYQQPGAGPLALPGVSGVKVYVLGPPRDPK
ALGLEERDSELYGQGLAGGFGMAMAQALMGYAAGSSAEDDGSPFDPEIGHSLAEILPLASGPATPKPGDLAVARAAPLVQ
LLHAHYSGPADASAVARGKKATAPTVSDQGWRRIDGDWLGLAADLAMQLDRGVNNTSLVLAFEFGDRRVALFVGDAQVGN
WLSWQGLTWGAGESAVTGPDLLKRTVYLKVGHHGSHNATLKAKGLELMNHPDLSAFIPVNQLDAKNIGWNQMPFAGILDA
LRVHAGARVVRADDDWLADCVVPPALAGGGGSLRAVRCRAKLWVEFDVA

Sequences:

>Translated_529_residues
MARTPRPSAEPKPRRRASPRSTGGAAAGPAADAAAAKPGFTVRHYCQGIGDCHLLSFPREDGGRYFILIDCGVHSGVSGG
ADKIREVVADIATVTKRIDLLVVTHEHWDHVSGFMSAADAFAAIHVEDVWFAWTEDSNDALARDFDTYRGQALAALQMAS
SRLAGLSGADASLGTLGRELGQVLGFHFGAAGDKVRKARNAARDMAKGKVVYQQPGAGPLALPGVSGVKVYVLGPPRDPK
ALGLEERDSELYGQGLAGGFGMAMAQALMGYAAGSSAEDDGSPFDPEIGHSLAEILPLASGPATPKPGDLAVARAAPLVQ
LLHAHYSGPADASAVARGKKATAPTVSDQGWRRIDGDWLGLAADLAMQLDRGVNNTSLVLAFEFGDRRVALFVGDAQVGN
WLSWQGLTWGAGESAVTGPDLLKRTVYLKVGHHGSHNATLKAKGLELMNHPDLSAFIPVNQLDAKNIGWNQMPFAGILDA
LRVHAGARVVRADDDWLADCVVPPALAGGGGSLRAVRCRAKLWVEFDVA
>Mature_528_residues
ARTPRPSAEPKPRRRASPRSTGGAAAGPAADAAAAKPGFTVRHYCQGIGDCHLLSFPREDGGRYFILIDCGVHSGVSGGA
DKIREVVADIATVTKRIDLLVVTHEHWDHVSGFMSAADAFAAIHVEDVWFAWTEDSNDALARDFDTYRGQALAALQMASS
RLAGLSGADASLGTLGRELGQVLGFHFGAAGDKVRKARNAARDMAKGKVVYQQPGAGPLALPGVSGVKVYVLGPPRDPKA
LGLEERDSELYGQGLAGGFGMAMAQALMGYAAGSSAEDDGSPFDPEIGHSLAEILPLASGPATPKPGDLAVARAAPLVQL
LHAHYSGPADASAVARGKKATAPTVSDQGWRRIDGDWLGLAADLAMQLDRGVNNTSLVLAFEFGDRRVALFVGDAQVGNW
LSWQGLTWGAGESAVTGPDLLKRTVYLKVGHHGSHNATLKAKGLELMNHPDLSAFIPVNQLDAKNIGWNQMPFAGILDAL
RVHAGARVVRADDDWLADCVVPPALAGGGGSLRAVRCRAKLWVEFDVA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55541; Mature: 55410

Theoretical pI: Translated: 6.96; Mature: 6.96

Prosite motif: PS00213 LIPOCALIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARTPRPSAEPKPRRRASPRSTGGAAAGPAADAAAAKPGFTVRHYCQGIGDCHLLSFPRE
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCHHHHHHCCCCCEEEEECCCC
DGGRYFILIDCGVHSGVSGGADKIREVVADIATVTKRIDLLVVTHEHWDHVSGFMSAADA
CCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHEEEEEEECCHHHHHHHHHHHHHH
FAAIHVEDVWFAWTEDSNDALARDFDTYRGQALAALQMASSRLAGLSGADASLGTLGREL
HEEEEEEEEEEEEECCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
GQVLGFHFGAAGDKVRKARNAARDMAKGKVVYQQPGAGPLALPGVSGVKVYVLGPPRDPK
HHHHHHHCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCEECCCCCCEEEEEECCCCCCC
ALGLEERDSELYGQGLAGGFGMAMAQALMGYAAGSSAEDDGSPFDPEIGHSLAEILPLAS
CCCCCHHCHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCC
GPATPKPGDLAVARAAPLVQLLHAHYSGPADASAVARGKKATAPTVSDQGWRRIDGDWLG
CCCCCCCCCEEHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCCCEECCCCHHH
LAADLAMQLDRGVNNTSLVLAFEFGDRRVALFVGDAQVGNWLSWQGLTWGAGESAVTGPD
HHHHHHHHHHCCCCCCEEEEEEEECCCEEEEEEECCCCCCEEEECCEEECCCCCCCCCHH
LLKRTVYLKVGHHGSHNATLKAKGLELMNHPDLSAFIPVNQLDAKNIGWNQMPFAGILDA
HHCEEEEEEECCCCCCCCEEEECCCHHCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHH
LRVHAGARVVRADDDWLADCVVPPALAGGGGSLRAVRCRAKLWVEFDVA
HHHHCCCEEEECCCCHHHHHCCCCCCCCCCCCEEEEEEEEEEEEEEECC
>Mature Secondary Structure 
ARTPRPSAEPKPRRRASPRSTGGAAAGPAADAAAAKPGFTVRHYCQGIGDCHLLSFPRE
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCHHHHHHCCCCCEEEEECCCC
DGGRYFILIDCGVHSGVSGGADKIREVVADIATVTKRIDLLVVTHEHWDHVSGFMSAADA
CCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHEEEEEEECCHHHHHHHHHHHHHH
FAAIHVEDVWFAWTEDSNDALARDFDTYRGQALAALQMASSRLAGLSGADASLGTLGREL
HEEEEEEEEEEEEECCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
GQVLGFHFGAAGDKVRKARNAARDMAKGKVVYQQPGAGPLALPGVSGVKVYVLGPPRDPK
HHHHHHHCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCEECCCCCCEEEEEECCCCCCC
ALGLEERDSELYGQGLAGGFGMAMAQALMGYAAGSSAEDDGSPFDPEIGHSLAEILPLAS
CCCCCHHCHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCC
GPATPKPGDLAVARAAPLVQLLHAHYSGPADASAVARGKKATAPTVSDQGWRRIDGDWLG
CCCCCCCCCEEHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCCCEECCCCHHH
LAADLAMQLDRGVNNTSLVLAFEFGDRRVALFVGDAQVGNWLSWQGLTWGAGESAVTGPD
HHHHHHHHHHCCCCCCEEEEEEEECCCEEEEEEECCCCCCEEEECCEEECCCCCCCCCHH
LLKRTVYLKVGHHGSHNATLKAKGLELMNHPDLSAFIPVNQLDAKNIGWNQMPFAGILDA
HHCEEEEEEECCCCCCCCEEEECCCHHCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHH
LRVHAGARVVRADDDWLADCVVPPALAGGGGSLRAVRCRAKLWVEFDVA
HHHHCCCEEEECCCCHHHHHCCCCCCCCCCCCEEEEEEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA