| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
Click here to switch to the map view.
The map label for this gene is yusP [H]
Identifier: 154244950
GI number: 154244950
Start: 1119130
End: 1120725
Strand: Reverse
Name: yusP [H]
Synonym: Xaut_1000
Alternate gene names: 154244950
Gene position: 1120725-1119130 (Counterclockwise)
Preceding gene: 154244951
Following gene: 154244948
Centisome position: 21.11
GC content: 71.24
Gene sequence:
>1596_bases GTGAGCGCACCCGCTCCCCTCCCGGCCGCGAGCGAAGACGCCGCCATCGCGCTACCGCCGGACAAATTCCATCGCGTGCT GGCCGGGCTGCTGCTGGTGCTGGCGCTGAGCTCGCTCGACGCCAACATCGTCGGCCCGGCCCTGCCGCTGATCTCCAGCG AGTTCGGCGCCCTCGACAGCCTGACCTGGGTGCTGACCATCTTCCTCCTCACCAGCACCGCCGCAACGCCGCTCTACGGC AAGCTCAGCGACATGTATGGCCGCCGGCCGCTGCTCACCATCGCGGTGCTGCTGTTCCTCGCCGGCTCGGCCTTCAGCGG CCTCGCCCAGAGCATGAACCAGCTCATCCTCGGCCGCGCCATCCAGGGCGTCGGCGCCGGCGGGCTGATGACGCTCACCC AGATCACCATGTCGGACCTGGTGTCGCCGCGGCGGCGCGGCAGCTACCAGGGGCTGTTCGGCGCGGTGTTCACCATCGCC AGCCTCGCCGGGCCGCCGCTGGGCGGCGTCATCGCCGAATTCTGGTCGTGGCGGTGGATCTTCTACGTGAACCTGCCGCT GGGCGCCGCCGCACTCACCCTGCTGTGGATGGGCCTGCCGCCGGGCGTGCGCACCACCAGCCACCGCATCGATGTTCTCG GCTTCGTCGTCATCATGGCCGCCACCAGCTGCGTGCTGATGGCGCTGAACCAGGGCAGCCACGGCAGCTGGACCTCCCCC ATCGTCATCAGCCTCGCCGTCGCCGCCGTGGTGCTGGCGCTGCTGCTGGGGCCGATCGAAGCGCGGGCGAAAGAGCCCCT CATTCCGCTCGCCATGGTGGGCAACTCCGTCTGGCTGATCGCCACCGGGGTCGCGACGCTCGTCACCATCGCGGTGTTCG GCGCCCTCGCCTTCATGCCGCTCTACCTGCAACTCGCCGGCGGGCTCTCGCCCACCGCCTCCGGCATCGCCATGGTGCCC TCCGCGGCCGGGCTGATGCTGTCGCTGCTGTATGGCGGGCGGGCCATCACCCGCACCGGGCGCTACAAGGTGTTCGCGGT CACCGGCGTCGGCGTCGCGACGCTCGCCCTGTTCGCGCTGGCGCTTGCGGCCTATGCCCTGCCCTCCCCCTACCTCCTGG GCGCGCTGCTGTTTCCCCTCGGCGCCGGGCTGGGCCTGCTGATGCCCGGCCTGACGGTGGCCTACCAGAACGCGGTGGCC CACGAGGACATCGGCACCGCCACGTCCACGGCGGGCTTCTTCCGGTCCCTCGGCGGCGCCTTCGGCATCGCGGTGGCCGG CGCCATCCTCGCCATGCAGGCGGGCGGGCTGCTGCCGGCCGGCGGCGGCGCGCAGGACATGGACAATATCGGGCTCGGGC AATTGTCCCAGCTGAGCCCGTCGGCGCAAGCGATGGTGCTTGCCGACTACCAGTGGGCCATGGTCACCATCTTCGCCGCC GCCGGCGTGGTGGCGGCGCTGGCGTTCGCGCTCATCCGGCTGCTGCCGGAGCAGGAATTGTCCGACGTGGCCAACCGGCC CGCGTCCAACGCGCTTGAGTCCAACCCGCTTGGGTCCGATCCGCCTGGGGCAAACCCGCCCGGCACCAAGTCATGA
Upstream 100 bases:
>100_bases TGATCGATGTTCCACAGGATGTGGCGGACCTGCTCCTCGCCTGCGCCGAGGCGGCACGTACTGTCGAAGCGACATGCGCC GCGCCCACAGGATCCCCCTC
Downstream 100 bases:
>100_bases CCCGGACGCGCCGGTTCCCGGCGGCGCCGTTTCAATCGGCGCCTGAGCCGCAATCCAGCCGATCTCCTCCAGTTGCGCGA TGGCGGCGCCGATATCGGCC
Product: major facilitator transporter
Products: Proton [Cytoplasm]; multidrug [Periplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 531; Mature: 530
Protein sequence:
>531_residues MSAPAPLPAASEDAAIALPPDKFHRVLAGLLLVLALSSLDANIVGPALPLISSEFGALDSLTWVLTIFLLTSTAATPLYG KLSDMYGRRPLLTIAVLLFLAGSAFSGLAQSMNQLILGRAIQGVGAGGLMTLTQITMSDLVSPRRRGSYQGLFGAVFTIA SLAGPPLGGVIAEFWSWRWIFYVNLPLGAAALTLLWMGLPPGVRTTSHRIDVLGFVVIMAATSCVLMALNQGSHGSWTSP IVISLAVAAVVLALLLGPIEARAKEPLIPLAMVGNSVWLIATGVATLVTIAVFGALAFMPLYLQLAGGLSPTASGIAMVP SAAGLMLSLLYGGRAITRTGRYKVFAVTGVGVATLALFALALAAYALPSPYLLGALLFPLGAGLGLLMPGLTVAYQNAVA HEDIGTATSTAGFFRSLGGAFGIAVAGAILAMQAGGLLPAGGGAQDMDNIGLGQLSQLSPSAQAMVLADYQWAMVTIFAA AGVVAALAFALIRLLPEQELSDVANRPASNALESNPLGSDPPGANPPGTKS
Sequences:
>Translated_531_residues MSAPAPLPAASEDAAIALPPDKFHRVLAGLLLVLALSSLDANIVGPALPLISSEFGALDSLTWVLTIFLLTSTAATPLYG KLSDMYGRRPLLTIAVLLFLAGSAFSGLAQSMNQLILGRAIQGVGAGGLMTLTQITMSDLVSPRRRGSYQGLFGAVFTIA SLAGPPLGGVIAEFWSWRWIFYVNLPLGAAALTLLWMGLPPGVRTTSHRIDVLGFVVIMAATSCVLMALNQGSHGSWTSP IVISLAVAAVVLALLLGPIEARAKEPLIPLAMVGNSVWLIATGVATLVTIAVFGALAFMPLYLQLAGGLSPTASGIAMVP SAAGLMLSLLYGGRAITRTGRYKVFAVTGVGVATLALFALALAAYALPSPYLLGALLFPLGAGLGLLMPGLTVAYQNAVA HEDIGTATSTAGFFRSLGGAFGIAVAGAILAMQAGGLLPAGGGAQDMDNIGLGQLSQLSPSAQAMVLADYQWAMVTIFAA AGVVAALAFALIRLLPEQELSDVANRPASNALESNPLGSDPPGANPPGTKS >Mature_530_residues SAPAPLPAASEDAAIALPPDKFHRVLAGLLLVLALSSLDANIVGPALPLISSEFGALDSLTWVLTIFLLTSTAATPLYGK LSDMYGRRPLLTIAVLLFLAGSAFSGLAQSMNQLILGRAIQGVGAGGLMTLTQITMSDLVSPRRRGSYQGLFGAVFTIAS LAGPPLGGVIAEFWSWRWIFYVNLPLGAAALTLLWMGLPPGVRTTSHRIDVLGFVVIMAATSCVLMALNQGSHGSWTSPI VISLAVAAVVLALLLGPIEARAKEPLIPLAMVGNSVWLIATGVATLVTIAVFGALAFMPLYLQLAGGLSPTASGIAMVPS AAGLMLSLLYGGRAITRTGRYKVFAVTGVGVATLALFALALAAYALPSPYLLGALLFPLGAGLGLLMPGLTVAYQNAVAH EDIGTATSTAGFFRSLGGAFGIAVAGAILAMQAGGLLPAGGGAQDMDNIGLGQLSQLSPSAQAMVLADYQWAMVTIFAAA GVVAALAFALIRLLPEQELSDVANRPASNALESNPLGSDPPGANPPGTKS
Specific function: Translocase That Confers Resistance To Substances Of High Hydrophobicity. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. EmrB family [H]
Homologues:
Organism=Escherichia coli, GI1789042, Length=439, Percent_Identity=26.1958997722096, Blast_Score=116, Evalue=5e-27, Organism=Escherichia coli, GI1788710, Length=401, Percent_Identity=26.9326683291771, Blast_Score=112, Evalue=5e-26, Organism=Escherichia coli, GI1790195, Length=442, Percent_Identity=27.3755656108597, Blast_Score=110, Evalue=2e-25, Organism=Escherichia coli, GI87081983, Length=416, Percent_Identity=25.9615384615385, Blast_Score=103, Evalue=3e-23, Organism=Escherichia coli, GI1788392, Length=357, Percent_Identity=31.0924369747899, Blast_Score=102, Evalue=7e-23, Organism=Escherichia coli, GI1790146, Length=157, Percent_Identity=29.2993630573248, Blast_Score=66, Evalue=7e-12, Organism=Saccharomyces cerevisiae, GI6323735, Length=319, Percent_Identity=31.3479623824451, Blast_Score=144, Evalue=5e-35, Organism=Saccharomyces cerevisiae, GI6319770, Length=408, Percent_Identity=28.6764705882353, Blast_Score=136, Evalue=1e-32, Organism=Saccharomyces cerevisiae, GI6322958, Length=457, Percent_Identity=25.8205689277899, Blast_Score=114, Evalue=3e-26, Organism=Saccharomyces cerevisiae, GI6321663, Length=172, Percent_Identity=34.8837209302326, Blast_Score=103, Evalue=7e-23, Organism=Saccharomyces cerevisiae, GI6325455, Length=250, Percent_Identity=27.2, Blast_Score=94, Evalue=6e-20, Organism=Saccharomyces cerevisiae, GI6321747, Length=432, Percent_Identity=24.537037037037, Blast_Score=74, Evalue=5e-14, Organism=Saccharomyces cerevisiae, GI6324954, Length=415, Percent_Identity=23.1325301204819, Blast_Score=70, Evalue=7e-13, Organism=Saccharomyces cerevisiae, GI6319783, Length=369, Percent_Identity=24.1192411924119, Blast_Score=68, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004638 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR005829 - InterPro: IPR001411 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 54147; Mature: 54016
Theoretical pI: Translated: 7.65; Mature: 7.65
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAPAPLPAASEDAAIALPPDKFHRVLAGLLLVLALSSLDANIVGPALPLISSEFGALDS CCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHCCCCHHCCHHHHHHHHHCHHHH LTWVLTIFLLTSTAATPLYGKLSDMYGRRPLLTIAVLLFLAGSAFSGLAQSMNQLILGRA HHHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH IQGVGAGGLMTLTQITMSDLVSPRRRGSYQGLFGAVFTIASLAGPPLGGVIAEFWSWRWI HHCCCCCHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCEEE FYVNLPLGAAALTLLWMGLPPGVRTTSHRIDVLGFVVIMAATSCVLMALNQGSHGSWTSP EEEECCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCH IVISLAVAAVVLALLLGPIEARAKEPLIPLAMVGNSVWLIATGVATLVTIAVFGALAFMP HHHHHHHHHHHHHHHHCCHHHHCCCCCCCHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHH LYLQLAGGLSPTASGIAMVPSAAGLMLSLLYGGRAITRTGRYKVFAVTGVGVATLALFAL HHHHHHCCCCCCCCCCEECCHHHHHHHHHHHCCEEEEECCCEEEEEECCCHHHHHHHHHH ALAAYALPSPYLLGALLFPLGAGLGLLMPGLTVAYQNAVAHEDIGTATSTAGFFRSLGGA HHHHHHCCCHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH FGIAVAGAILAMQAGGLLPAGGGAQDMDNIGLGQLSQLSPSAQAMVLADYQWAMVTIFAA HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCEEEEECCHHHHHHHHHH AGVVAALAFALIRLLPEQELSDVANRPASNALESNPLGSDPPGANPPGTKS HHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SAPAPLPAASEDAAIALPPDKFHRVLAGLLLVLALSSLDANIVGPALPLISSEFGALDS CCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHCCCCHHCCHHHHHHHHHCHHHH LTWVLTIFLLTSTAATPLYGKLSDMYGRRPLLTIAVLLFLAGSAFSGLAQSMNQLILGRA HHHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH IQGVGAGGLMTLTQITMSDLVSPRRRGSYQGLFGAVFTIASLAGPPLGGVIAEFWSWRWI HHCCCCCHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCEEE FYVNLPLGAAALTLLWMGLPPGVRTTSHRIDVLGFVVIMAATSCVLMALNQGSHGSWTSP EEEECCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCH IVISLAVAAVVLALLLGPIEARAKEPLIPLAMVGNSVWLIATGVATLVTIAVFGALAFMP HHHHHHHHHHHHHHHHCCHHHHCCCCCCCHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHH LYLQLAGGLSPTASGIAMVPSAAGLMLSLLYGGRAITRTGRYKVFAVTGVGVATLALFAL HHHHHHCCCCCCCCCCEECCHHHHHHHHHHHCCEEEEECCCEEEEEECCCHHHHHHHHHH ALAAYALPSPYLLGALLFPLGAGLGLLMPGLTVAYQNAVAHEDIGTATSTAGFFRSLGGA HHHHHHCCCHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH FGIAVAGAILAMQAGGLLPAGGGAQDMDNIGLGQLSQLSPSAQAMVLADYQWAMVTIFAA HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCEEEEECCHHHHHHHHHH AGVVAALAFALIRLLPEQELSDVANRPASNALESNPLGSDPPGANPPGTKS HHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; multidrug [Cytoplasm] [C]
Specific reaction: Proton [Periplasm] + multidrug [Cytoplasm] = Proton [Cytoplasm] + multidrug [Periplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]