| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is 154244937
Identifier: 154244937
GI number: 154244937
Start: 1103024
End: 1105138
Strand: Direct
Name: 154244937
Synonym: Xaut_0987
Alternate gene names: NA
Gene position: 1103024-1105138 (Clockwise)
Preceding gene: 154244936
Following gene: 154244938
Centisome position: 20.78
GC content: 67.47
Gene sequence:
>2115_bases ATGACGGTCTTGAAGGGTTTGGGGCGCTGCGTTCTTTTTTGGACAATCATATTCGGCATCTTCGGCGTCTTGTACTGGCT CCTTCCTGTCGTCGACATGAGCGCGCTCTGGGGCGGGACGGCGCGCGCCTTCAGCGGTGATTTTTCCACCGTCGGCACCC AGCCCTATGCTTTCGCCCTGGCCTTCGCCCTGTTCGCCACGGCGGTCGGCTTCGCCTCCGCTTTCCTCATCCTGCATGTG GGTCCGATCGGGTGGAGGCTGCGGCGCCTGCGATTGCGTATCGCGGGCACGGGGGACATGGAAGGCTTCGCCAGAACCTA TGACGCCACGCGCGCGCTCATGGAGCGCGATCGACTGATCAGCCATGCGTGGAAGCAGTTCGACACCGTGCTCGTTCATC GGCCGGATGAACGCATCATCCGCAGCACCGCCCGTGCCCACGCCTTTTTCAATCTGGGCATGGCGCGGGAGAAGTATTTC GGCCTGAAGATGATGGGCGCGCTGCCGGGCTATTTCGTCGGCATCGGTCTTCTGCTCACCTTCGCCGGCCTCGTGCTGGC GCTCAACAAGGCGGCCATGGCCGTCAACAGCTCGGATGCCGCCGGAATGCAGGGCGCGACGCGCGAACTGCTTCAGGTGG CGACCTTCAAGTTTGCCACCTCCATCGCCGGCCTTGGTGCCTCCATCGCGCTCTCGCTGCTGTTCCGCATCTATACCATC CTGATGGAAGGCTTCTTCATCGGCTTCTGCGAGACGGTGGAGGACCGGGTGCGCTATCTGTCGGCACAGCAGATCGCGGC CGAGAGCCGGGATTTTGCCGCCGAACAGACCGATCAGCTCAAGTCGATCAACAGCGCCGACTTCTTCGCGCGCATGGGGC AGGAGCTGACGCCGGGCATGTCCCGCATGTTCGAGACGGCGCTCGACAAGGTCATGTCGCCGGTGACCACCAGCATCGAC CAGGCGGTCCATAGGCTCGCCGACAGCAGCCAGAGCGGCATGTCCGAGATGCTGACGCGCTTCACCGATTCGGTGCAGAA CGGGGCCGGGGCCGAGTTGCGCGGGCTCGCCGAGACGCTCCGGGGCATGCAGGGTGCCATGGTGGGCGTGCAGCAGGGGC TGACCGGGTCCGGCGAGGATTTCGGCCGGCGCATGTCGGATGCCGCGGAAAACCTCAACCGCCTCGTCACCGACGCCGGC GCACGCCTGGGTGAAGGCACGGACCAGAGCCGCGCGGTCCTCATGGATGCGGTCACCGCCATGCGGGAGACCTTCGAGCA AGCCAATCGCAAGGTGGACGAGGGTCTCGGCGCCGCGGCGGGCGGGGCTTCGGCGCGGCTGGAGGAGGTCATGGGGCGGG TGCTCGGCAGCCTCGAAGCCCAGGTGGGCGGCTTTCGCGAGAGCCTGTCCGGCTTCCAGGAGAAGATGGCCGGCCAGCTC GATGAGACCCGGGTCCGCGTCTCCGCCGCCCAGGCGGAGGCGACCGATGCCGTCGCCCAGGCCTCGGCCCAGGCGGCGCG CGCGCTCCAGGACGGGCTTGCGGATGCGCTCGTGCGCATCAACGGCGAGATCGAGCGTTTCGTCGTCGCCATGCGGGCCA GCGAGGTGACGCTGGCGGCGCAGGCCAAGGCGATGATGGACGCCACCGACAAGTCGCGCCAGGTGGCCGATGCCTTCAGC CGCACTGCGCAGGATGTGCGCGCGGCTAGCGTACCGCTGGCCCAATCGGGCGAGCGCATCGCGGGGGCGACCGAGAAGCT CGGCGAGGCCGCCGGCCGGTCGGTGGCGGTCCTCGACAAGAGCCAGGAGGAGGCGCGGCGGCTGGCCCAGGCGCTGACCG GCCATGTCTCCAACCTCGATCAGGTCTGGCGCAGCTATTCGGCCCGCTTCGAGGCGGTCGACGAGGCGCTGGGCAAGGCG TTCGAGCGCCTGACGCGCGGAACCGACGAGCAGCAGGACCGGATCGCCACTTTCGTTCGCGACGTGGACGTGACCTTCAA GGAAGCGGTGGATACGCTGGCCGGCTGCATCGGCGGCCTGAAGGACAATACCGAGGAGATGGTGGAGGCGGTGGACGACC TGAAACGCGCGCTGCGCGTCGAGGCCGCGGAATGA
Upstream 100 bases:
>100_bases GGGACTTGCTCCCCGGCCGTCCCGCACGCCATTGTGCCGGGCAGTGTCGCGGTGGGACCGCGTCGCGCGCGGAAGCGCGA CCGGCGGGAGCGGGGATGGA
Downstream 100 bases:
>100_bases CCGGAGCGCGCCATGGCCATCACTGAAGACACCGAGCACGCAGGGTCCGAGGAAGGTGAGAACTATTTCATCTCCATGAC CGACATGATGGTCGGGGTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 704; Mature: 703
Protein sequence:
>704_residues MTVLKGLGRCVLFWTIIFGIFGVLYWLLPVVDMSALWGGTARAFSGDFSTVGTQPYAFALAFALFATAVGFASAFLILHV GPIGWRLRRLRLRIAGTGDMEGFARTYDATRALMERDRLISHAWKQFDTVLVHRPDERIIRSTARAHAFFNLGMAREKYF GLKMMGALPGYFVGIGLLLTFAGLVLALNKAAMAVNSSDAAGMQGATRELLQVATFKFATSIAGLGASIALSLLFRIYTI LMEGFFIGFCETVEDRVRYLSAQQIAAESRDFAAEQTDQLKSINSADFFARMGQELTPGMSRMFETALDKVMSPVTTSID QAVHRLADSSQSGMSEMLTRFTDSVQNGAGAELRGLAETLRGMQGAMVGVQQGLTGSGEDFGRRMSDAAENLNRLVTDAG ARLGEGTDQSRAVLMDAVTAMRETFEQANRKVDEGLGAAAGGASARLEEVMGRVLGSLEAQVGGFRESLSGFQEKMAGQL DETRVRVSAAQAEATDAVAQASAQAARALQDGLADALVRINGEIERFVVAMRASEVTLAAQAKAMMDATDKSRQVADAFS RTAQDVRAASVPLAQSGERIAGATEKLGEAAGRSVAVLDKSQEEARRLAQALTGHVSNLDQVWRSYSARFEAVDEALGKA FERLTRGTDEQQDRIATFVRDVDVTFKEAVDTLAGCIGGLKDNTEEMVEAVDDLKRALRVEAAE
Sequences:
>Translated_704_residues MTVLKGLGRCVLFWTIIFGIFGVLYWLLPVVDMSALWGGTARAFSGDFSTVGTQPYAFALAFALFATAVGFASAFLILHV GPIGWRLRRLRLRIAGTGDMEGFARTYDATRALMERDRLISHAWKQFDTVLVHRPDERIIRSTARAHAFFNLGMAREKYF GLKMMGALPGYFVGIGLLLTFAGLVLALNKAAMAVNSSDAAGMQGATRELLQVATFKFATSIAGLGASIALSLLFRIYTI LMEGFFIGFCETVEDRVRYLSAQQIAAESRDFAAEQTDQLKSINSADFFARMGQELTPGMSRMFETALDKVMSPVTTSID QAVHRLADSSQSGMSEMLTRFTDSVQNGAGAELRGLAETLRGMQGAMVGVQQGLTGSGEDFGRRMSDAAENLNRLVTDAG ARLGEGTDQSRAVLMDAVTAMRETFEQANRKVDEGLGAAAGGASARLEEVMGRVLGSLEAQVGGFRESLSGFQEKMAGQL DETRVRVSAAQAEATDAVAQASAQAARALQDGLADALVRINGEIERFVVAMRASEVTLAAQAKAMMDATDKSRQVADAFS RTAQDVRAASVPLAQSGERIAGATEKLGEAAGRSVAVLDKSQEEARRLAQALTGHVSNLDQVWRSYSARFEAVDEALGKA FERLTRGTDEQQDRIATFVRDVDVTFKEAVDTLAGCIGGLKDNTEEMVEAVDDLKRALRVEAAE >Mature_703_residues TVLKGLGRCVLFWTIIFGIFGVLYWLLPVVDMSALWGGTARAFSGDFSTVGTQPYAFALAFALFATAVGFASAFLILHVG PIGWRLRRLRLRIAGTGDMEGFARTYDATRALMERDRLISHAWKQFDTVLVHRPDERIIRSTARAHAFFNLGMAREKYFG LKMMGALPGYFVGIGLLLTFAGLVLALNKAAMAVNSSDAAGMQGATRELLQVATFKFATSIAGLGASIALSLLFRIYTIL MEGFFIGFCETVEDRVRYLSAQQIAAESRDFAAEQTDQLKSINSADFFARMGQELTPGMSRMFETALDKVMSPVTTSIDQ AVHRLADSSQSGMSEMLTRFTDSVQNGAGAELRGLAETLRGMQGAMVGVQQGLTGSGEDFGRRMSDAAENLNRLVTDAGA RLGEGTDQSRAVLMDAVTAMRETFEQANRKVDEGLGAAAGGASARLEEVMGRVLGSLEAQVGGFRESLSGFQEKMAGQLD ETRVRVSAAQAEATDAVAQASAQAARALQDGLADALVRINGEIERFVVAMRASEVTLAAQAKAMMDATDKSRQVADAFSR TAQDVRAASVPLAQSGERIAGATEKLGEAAGRSVAVLDKSQEEARRLAQALTGHVSNLDQVWRSYSARFEAVDEALGKAF ERLTRGTDEQQDRIATFVRDVDVTFKEAVDTLAGCIGGLKDNTEEMVEAVDDLKRALRVEAAE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 75849; Mature: 75718
Theoretical pI: Translated: 5.21; Mature: 5.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVLKGLGRCVLFWTIIFGIFGVLYWLLPVVDMSALWGGTARAFSGDFSTVGTQPYAFAL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCHHHHHH AFALFATAVGFASAFLILHVGPIGWRLRRLRLRIAGTGDMEGFARTYDATRALMERDRLI HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH SHAWKQFDTVLVHRPDERIIRSTARAHAFFNLGMAREKYFGLKMMGALPGYFVGIGLLLT HHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH FAGLVLALNKAAMAVNSSDAAGMQGATRELLQVATFKFATSIAGLGASIALSLLFRIYTI HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH LMEGFFIGFCETVEDRVRYLSAQQIAAESRDFAAEQTDQLKSINSADFFARMGQELTPGM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHH SRMFETALDKVMSPVTTSIDQAVHRLADSSQSGMSEMLTRFTDSVQNGAGAELRGLAETL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHH RGMQGAMVGVQQGLTGSGEDFGRRMSDAAENLNRLVTDAGARLGEGTDQSRAVLMDAVTA HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH MRETFEQANRKVDEGLGAAAGGASARLEEVMGRVLGSLEAQVGGFRESLSGFQEKMAGQL HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH DETRVRVSAAQAEATDAVAQASAQAARALQDGLADALVRINGEIERFVVAMRASEVTLAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH QAKAMMDATDKSRQVADAFSRTAQDVRAASVPLAQSGERIAGATEKLGEAAGRSVAVLDK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCHHHHHHHHHHHHCCCEEEEECC SQEEARRLAQALTGHVSNLDQVWRSYSARFEAVDEALGKAFERLTRGTDEQQDRIATFVR CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH DVDVTFKEAVDTLAGCIGGLKDNTEEMVEAVDDLKRALRVEAAE HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TVLKGLGRCVLFWTIIFGIFGVLYWLLPVVDMSALWGGTARAFSGDFSTVGTQPYAFAL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCHHHHHH AFALFATAVGFASAFLILHVGPIGWRLRRLRLRIAGTGDMEGFARTYDATRALMERDRLI HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH SHAWKQFDTVLVHRPDERIIRSTARAHAFFNLGMAREKYFGLKMMGALPGYFVGIGLLLT HHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH FAGLVLALNKAAMAVNSSDAAGMQGATRELLQVATFKFATSIAGLGASIALSLLFRIYTI HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH LMEGFFIGFCETVEDRVRYLSAQQIAAESRDFAAEQTDQLKSINSADFFARMGQELTPGM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHH SRMFETALDKVMSPVTTSIDQAVHRLADSSQSGMSEMLTRFTDSVQNGAGAELRGLAETL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHH RGMQGAMVGVQQGLTGSGEDFGRRMSDAAENLNRLVTDAGARLGEGTDQSRAVLMDAVTA HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH MRETFEQANRKVDEGLGAAAGGASARLEEVMGRVLGSLEAQVGGFRESLSGFQEKMAGQL HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH DETRVRVSAAQAEATDAVAQASAQAARALQDGLADALVRINGEIERFVVAMRASEVTLAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH QAKAMMDATDKSRQVADAFSRTAQDVRAASVPLAQSGERIAGATEKLGEAAGRSVAVLDK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCHHHHHHHHHHHHCCCEEEEECC SQEEARRLAQALTGHVSNLDQVWRSYSARFEAVDEALGKAFERLTRGTDEQQDRIATFVR CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH DVDVTFKEAVDTLAGCIGGLKDNTEEMVEAVDDLKRALRVEAAE HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA