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The map label for this gene is ybfF [C]

Identifier: 154244916

GI number: 154244916

Start: 1084290

End: 1085018

Strand: Reverse

Name: ybfF [C]

Synonym: Xaut_0966

Alternate gene names: 154244916

Gene position: 1085018-1084290 (Counterclockwise)

Preceding gene: 154244917

Following gene: 154244915

Centisome position: 20.44

GC content: 72.29

Gene sequence:

>729_bases
ATGGCCGAGGCTGGAACCCAACACGTCGCCCTTGTCATCCCCGCGCTGAACGAGGCGGAAGCCATCGGCGCGACCCTCGC
CGAGATCCCGGTGGGGGTGGTGGACGAGATCATCGTGGCCGATGGCGGCTCGACCGACGCGACCCGCGAGATCGCCATCG
CCGCCGGCGCTACCGTTCTCGCCTCCGGCCGCGGCTTCGGCCGCGCCTGCCTTGAGGGCGTGTGCGAGGCGCGCGGCGCC
GACATCATCGCCTTCATGGATGCCGATGGCGCCGACGACCCGGCCTTCCTGCCCGCGCTTCTGGCGCCGCTGAAGACGGG
CACGGCGGACTTCGCCATCGCCTCGCGCACCCGCGGCGTGCGGGAGGCGGGCAGCATGGCCTGGCACCAGGTGGCGGCGG
GACGCGCCGCCGGCCTCGGCATGCGGACGCTCTACGGCGTCGCCTATTCCGACATGTGCACCTTCCGCGCCATCCGCCGC
GATGCCCTCGTCGGCCTCGGGATGCGGGAGCTGACCTACGGCTGGAACATCGAGATGCAGATGCGAGCGGCTCGTGCCGG
CCTCGCCATCGTGGAAATCCCTGTCGCCTACCGCCGCCGGCGGGGCGGCGTCTCCAAGGTCGCCGGCAACCTGCGCACCA
CGCTCACCGCCGGCACCCGCATCGCCGCCACCTTCCTGCGGGTGGCCACTCAGCTTTCCGGACCCGCTGCCGCGCCGAAC
AAGATGTGA

Upstream 100 bases:

>100_bases
AGATCTGGGAGGGCGAGGCCTATCGCTGCTTCCGCGACGGGCTCCTGTCCGAGGCGCCGCCCGCCGCCTGCGCCAATTGC
GGCCTGCGATGGAGCCTGTG

Downstream 100 bases:

>100_bases
GAACGTCCATGCTGCTACAGCCTTTGCACGAGCCCGACGACACCAAATGGCCGGTGCGCTCGCCGCTTCCGTCCGGCTTC
CTGCCGCTGATCGAGCGGGC

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 242; Mature: 241

Protein sequence:

>242_residues
MAEAGTQHVALVIPALNEAEAIGATLAEIPVGVVDEIIVADGGSTDATREIAIAAGATVLASGRGFGRACLEGVCEARGA
DIIAFMDADGADDPAFLPALLAPLKTGTADFAIASRTRGVREAGSMAWHQVAAGRAAGLGMRTLYGVAYSDMCTFRAIRR
DALVGLGMRELTYGWNIEMQMRAARAGLAIVEIPVAYRRRRGGVSKVAGNLRTTLTAGTRIAATFLRVATQLSGPAAAPN
KM

Sequences:

>Translated_242_residues
MAEAGTQHVALVIPALNEAEAIGATLAEIPVGVVDEIIVADGGSTDATREIAIAAGATVLASGRGFGRACLEGVCEARGA
DIIAFMDADGADDPAFLPALLAPLKTGTADFAIASRTRGVREAGSMAWHQVAAGRAAGLGMRTLYGVAYSDMCTFRAIRR
DALVGLGMRELTYGWNIEMQMRAARAGLAIVEIPVAYRRRRGGVSKVAGNLRTTLTAGTRIAATFLRVATQLSGPAAAPN
KM
>Mature_241_residues
AEAGTQHVALVIPALNEAEAIGATLAEIPVGVVDEIIVADGGSTDATREIAIAAGATVLASGRGFGRACLEGVCEARGAD
IIAFMDADGADDPAFLPALLAPLKTGTADFAIASRTRGVREAGSMAWHQVAAGRAAGLGMRTLYGVAYSDMCTFRAIRRD
ALVGLGMRELTYGWNIEMQMRAARAGLAIVEIPVAYRRRRGGVSKVAGNLRTTLTAGTRIAATFLRVATQLSGPAAAPNK
M

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Homo sapiens, GI4503363, Length=228, Percent_Identity=28.5087719298246, Blast_Score=78, Evalue=6e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 25014; Mature: 24883

Theoretical pI: Translated: 8.49; Mature: 8.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEAGTQHVALVIPALNEAEAIGATLAEIPVGVVDEIIVADGGSTDATREIAIAAGATVL
CCCCCCCEEEEEEECCCCHHHHHHHHHHCCHHHHHEEEEECCCCCCCHHEEEEECCCEEE
ASGRGFGRACLEGVCEARGADIIAFMDADGADDPAFLPALLAPLKTGTADFAIASRTRGV
ECCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCH
REAGSMAWHQVAAGRAAGLGMRTLYGVAYSDMCTFRAIRRDALVGLGMRELTYGWNIEMQ
HHHHHHHHHHHHHCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCEEEE
MRAARAGLAIVEIPVAYRRRRGGVSKVAGNLRTTLTAGTRIAATFLRVATQLSGPAAAPN
EHHHHCCEEEEEECHHHHHHCCCHHHHHCCHHHHHHCCHHHHHHHHHHHHHCCCCCCCCC
KM
CC
>Mature Secondary Structure 
AEAGTQHVALVIPALNEAEAIGATLAEIPVGVVDEIIVADGGSTDATREIAIAAGATVL
CCCCCCEEEEEEECCCCHHHHHHHHHHCCHHHHHEEEEECCCCCCCHHEEEEECCCEEE
ASGRGFGRACLEGVCEARGADIIAFMDADGADDPAFLPALLAPLKTGTADFAIASRTRGV
ECCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCH
REAGSMAWHQVAAGRAAGLGMRTLYGVAYSDMCTFRAIRRDALVGLGMRELTYGWNIEMQ
HHHHHHHHHHHHHCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCEEEE
MRAARAGLAIVEIPVAYRRRRGGVSKVAGNLRTTLTAGTRIAATFLRVATQLSGPAAAPN
EHHHHCCEEEEEECHHHHHHCCCHHHHHCCHHHHHHCCHHHHHHHHHHHHHCCCCCCCCC
KM
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]