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The map label for this gene is 154244908

Identifier: 154244908

GI number: 154244908

Start: 1076757

End: 1077314

Strand: Reverse

Name: 154244908

Synonym: Xaut_0958

Alternate gene names: NA

Gene position: 1077314-1076757 (Counterclockwise)

Preceding gene: 154244910

Following gene: 154244907

Centisome position: 20.29

GC content: 66.85

Gene sequence:

>558_bases
ATGACCAGTCCTGAACCTGATCTCGAGGCGCTGATGCGGGCGAGCCAGTCCGGCGACGCCGCGGCGCACCGGGCGCTGCT
GCACCACCTGTCCGGCCGCCTGCGCAGCTATTTCCGCAACAGGCTTCGCCGCTCCGGCACGGGCACGGACGAGGCCGAGG
ACCTGGTGCAGGACACGCTTCTCGTCCTGCACACCAAGCGTCACACCTATGACGGCTCGTCGCCGGTGCTGGCCTGGACC
TACGGCATCGCGCGCTACAAGCTCATCGATTATCTGAGGGCCAACGCCCGCGCCCTGCGCCATGTCCAGATCGACGAGGT
GGATGATCTCGCCGACGCGCACGACGGGTTTTCCGCCGTGGATACAGCACGCGAGCTTCATCGGGCGCTGGCGACACTGC
CACGGCATTTCCGCCTGCCCATCGAATACGTGAAGATCGAGGGCCTCAGCATCGCGGAAGCGGCCGCCCGCATCGGCATG
TCCGATGCGGCGGTGAAGATCGGAATACATCGCGGCATGAAGCGGCTCGCCGCCGTGCTGTCGGAGGCACGCCCATGA

Upstream 100 bases:

>100_bases
CGTCTGATGCCCTCGGCCAGCGCGCTCGCAGTCTCGTGATGGGATGCGACGTAACACACCACGGCCCGGAGGCGAAGACA
TCCGCATGAGGGGGAACTTC

Downstream 100 bases:

>100_bases
ATACCGATGACCTCATCGACTTCCTCTCGACCCGCGTCGAGGCCGTGGACCCCCGCCGGCAGGATCGCATCGTGGCGCTG
GCCGTGTTCGGATCGCTGGC

Product: RNA polymerase sigma factor

Products: NA

Alternate protein names: ECF Subfamily RNA Polymerase Sigma-24 Factor; RNA Polymerase Sigma-24 Subunit ECF Subfamily; Sigma-; RNA Polymerase Sigma-70 Factor; RNA Polymerase Sigma Factor Protein; RNA Polymerase Sigma-E Factor Protein; ECF-Family RNA Polymerase Sigma Factor; RNA Polymerase Sigma Q Factor; RNA Polymerase ECF-Subfamily Sigma Factor; RNA Polymerase Sigma-24 Subunit ECF Subfamily Protein; RNA Polymerase Sigma-24 Factor; ECF-Type Sigma Factor; RNA Polymerase ECF-Type Sigma Factor; DNA-Directed RNA Polymeracialized Sigma Subunit; RNA Polymerase Sigma Factor NccH; RNA Polymerase Sigma Subunit; RNA Polymerase Sigma Factor SigM; RNA Polymerase Sigma Factor Sigma-70 Family; ECF Family RNA Polymerase Sigma Factor; ECF Subfamily RNA Polymerase Sigma-24 Subunit; Sigma-70 Family RNA Polymerase Sigma Factor

Number of amino acids: Translated: 185; Mature: 184

Protein sequence:

>185_residues
MTSPEPDLEALMRASQSGDAAAHRALLHHLSGRLRSYFRNRLRRSGTGTDEAEDLVQDTLLVLHTKRHTYDGSSPVLAWT
YGIARYKLIDYLRANARALRHVQIDEVDDLADAHDGFSAVDTARELHRALATLPRHFRLPIEYVKIEGLSIAEAAARIGM
SDAAVKIGIHRGMKRLAAVLSEARP

Sequences:

>Translated_185_residues
MTSPEPDLEALMRASQSGDAAAHRALLHHLSGRLRSYFRNRLRRSGTGTDEAEDLVQDTLLVLHTKRHTYDGSSPVLAWT
YGIARYKLIDYLRANARALRHVQIDEVDDLADAHDGFSAVDTARELHRALATLPRHFRLPIEYVKIEGLSIAEAAARIGM
SDAAVKIGIHRGMKRLAAVLSEARP
>Mature_184_residues
TSPEPDLEALMRASQSGDAAAHRALLHHLSGRLRSYFRNRLRRSGTGTDEAEDLVQDTLLVLHTKRHTYDGSSPVLAWTY
GIARYKLIDYLRANARALRHVQIDEVDDLADAHDGFSAVDTARELHRALATLPRHFRLPIEYVKIEGLSIAEAAARIGMS
DAAVKIGIHRGMKRLAAVLSEARP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20555; Mature: 20423

Theoretical pI: Translated: 9.38; Mature: 9.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSPEPDLEALMRASQSGDAAAHRALLHHLSGRLRSYFRNRLRRSGTGTDEAEDLVQDTL
CCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
LVLHTKRHTYDGSSPVLAWTYGIARYKLIDYLRANARALRHVQIDEVDDLADAHDGFSAV
HHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHH
DTARELHRALATLPRHFRLPIEYVKIEGLSIAEAAARIGMSDAAVKIGIHRGMKRLAAVL
HHHHHHHHHHHHHHHHHCCCHHHEEECCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
SEARP
HHCCC
>Mature Secondary Structure 
TSPEPDLEALMRASQSGDAAAHRALLHHLSGRLRSYFRNRLRRSGTGTDEAEDLVQDTL
CCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
LVLHTKRHTYDGSSPVLAWTYGIARYKLIDYLRANARALRHVQIDEVDDLADAHDGFSAV
HHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHH
DTARELHRALATLPRHFRLPIEYVKIEGLSIAEAAARIGMSDAAVKIGIHRGMKRLAAVL
HHHHHHHHHHHHHHHHHCCCHHHEEECCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
SEARP
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA