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The map label for this gene is 154244903

Identifier: 154244903

GI number: 154244903

Start: 1072416

End: 1073096

Strand: Reverse

Name: 154244903

Synonym: Xaut_0953

Alternate gene names: NA

Gene position: 1073096-1072416 (Counterclockwise)

Preceding gene: 154244904

Following gene: 154244902

Centisome position: 20.21

GC content: 71.37

Gene sequence:

>681_bases
ATGCGCGACGGCGTGCGCTTCGCTGGAGGGCAAGAAGGCATCTCGACGGATGCGCTGATCGATGCTCTCTCGGGGGATCT
TTCGGCCACGCCGGTCCCATCCGTGCGCCGCACGCTCGCCCTGGCGTTCGCCTTCGGAAGTGCGGCGTCCGCAGCAGCCA
TGCTGGCGCTGCTCGGCCTGCGCCCGGACGTGTCTTCGGCCCTCGCCACCGCGTCGTTCTGGATCAAACTCGTCTTCCCG
TCCGGCCTCGCAGTTGCCGGGCTGATGGCCGTCGACCGGCTGGGCCGGCCGGGCGCTGAAGCTGGTCGCGGCTATACGGT
GGGGATCGCCGTGGCTGGCACCATGGCCCTGCTCGCGAGCGTCCAGCTCGCCTCCGCGCCGCGGGACGCGATGCGCCCGC
TCCTCCTCGGCCACACGCTGGACCACTGCACGGCCCTCATCATGCTGCTCGCGCTGCCCATCCTGGCCGCCGGCATGTAT
GCCATGCGCCAGATGGCTCCCACACGGCTGCGCCTTGCGGGCGCCGCCGTGGGCGTGACGGCCGGGGCGCTTTCGGCCGC
CATCTACGCCATCGCCTGCGACGAGACGGCCCTGCCCTTCGTCACCTTGTGGTACGGCGCCGGCATTGCCCTCACAGGTG
TGCTGGGCGCGCTTCTTGGGCCGCGCCTGCTGCGATGGTAG

Upstream 100 bases:

>100_bases
GGATGATTTGACATGATTTTCGCTTTGGCGCGTGGCGTGTGGGGCTCATGGATGAGCGCTCTTCCCCAGCCGCGGGCCTG
AACTGGAAGGCGGGTTCACG

Downstream 100 bases:

>100_bases
GGCCCTGCCGCTGTGGTCATCGGCCATCATCCGCTTGCGTTTTAGGGCGGTCGATCTAGAATGGATTTGGCGCTGGGCCA
TTGGATCGTTGGGCCGGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: ECF-Family RNA Polymerase Sigma Factor

Number of amino acids: Translated: 226; Mature: 226

Protein sequence:

>226_residues
MRDGVRFAGGQEGISTDALIDALSGDLSATPVPSVRRTLALAFAFGSAASAAAMLALLGLRPDVSSALATASFWIKLVFP
SGLAVAGLMAVDRLGRPGAEAGRGYTVGIAVAGTMALLASVQLASAPRDAMRPLLLGHTLDHCTALIMLLALPILAAGMY
AMRQMAPTRLRLAGAAVGVTAGALSAAIYAIACDETALPFVTLWYGAGIALTGVLGALLGPRLLRW

Sequences:

>Translated_226_residues
MRDGVRFAGGQEGISTDALIDALSGDLSATPVPSVRRTLALAFAFGSAASAAAMLALLGLRPDVSSALATASFWIKLVFP
SGLAVAGLMAVDRLGRPGAEAGRGYTVGIAVAGTMALLASVQLASAPRDAMRPLLLGHTLDHCTALIMLLALPILAAGMY
AMRQMAPTRLRLAGAAVGVTAGALSAAIYAIACDETALPFVTLWYGAGIALTGVLGALLGPRLLRW
>Mature_226_residues
MRDGVRFAGGQEGISTDALIDALSGDLSATPVPSVRRTLALAFAFGSAASAAAMLALLGLRPDVSSALATASFWIKLVFP
SGLAVAGLMAVDRLGRPGAEAGRGYTVGIAVAGTMALLASVQLASAPRDAMRPLLLGHTLDHCTALIMLLALPILAAGMY
AMRQMAPTRLRLAGAAVGVTAGALSAAIYAIACDETALPFVTLWYGAGIALTGVLGALLGPRLLRW

Specific function: Unknown

COG id: COG4944

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22927; Mature: 22927

Theoretical pI: Translated: 9.68; Mature: 9.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDGVRFAGGQEGISTDALIDALSGDLSATPVPSVRRTLALAFAFGSAASAAAMLALLGL
CCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCC
RPDVSSALATASFWIKLVFPSGLAVAGLMAVDRLGRPGAEAGRGYTVGIAVAGTMALLAS
CCCHHHHHHHHHHHHHEECCCCHHHHHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHHHHH
VQLASAPRDAMRPLLLGHTLDHCTALIMLLALPILAAGMYAMRQMAPTRLRLAGAAVGVT
HHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
AGALSAAIYAIACDETALPFVTLWYGAGIALTGVLGALLGPRLLRW
HHHHHHHHHHEECCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRDGVRFAGGQEGISTDALIDALSGDLSATPVPSVRRTLALAFAFGSAASAAAMLALLGL
CCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCC
RPDVSSALATASFWIKLVFPSGLAVAGLMAVDRLGRPGAEAGRGYTVGIAVAGTMALLAS
CCCHHHHHHHHHHHHHEECCCCHHHHHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHHHHH
VQLASAPRDAMRPLLLGHTLDHCTALIMLLALPILAAGMYAMRQMAPTRLRLAGAAVGVT
HHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
AGALSAAIYAIACDETALPFVTLWYGAGIALTGVLGALLGPRLLRW
HHHHHHHHHHEECCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA