| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is cls [H]
Identifier: 154244896
GI number: 154244896
Start: 1066568
End: 1068013
Strand: Direct
Name: cls [H]
Synonym: Xaut_0946
Alternate gene names: 154244896
Gene position: 1066568-1068013 (Clockwise)
Preceding gene: 154244891
Following gene: 154244897
Centisome position: 20.09
GC content: 68.53
Gene sequence:
>1446_bases ATGCATGATTCCGCCGTCCTCGCCTGGATGCTGTTTGCGGCCCACGCGAGCCTCCAGCTTGTCTTCATCGTCCGCGCATT GCTGCGCCCCCACCGGGAGCCCTCTTCGCGGTTTGCCTGGGTGCTGGTGATCCTGCTCGCGCCCGTGGTCGGCGTCCTGG CCTATATCCTGTTCGGCGAGGTCAATTTGGGGCGCAAGCCCATCGAGCGGCTGCGCGCGGCGCTGAAGGCCCTGCCGCCC GCCCCGGACGTGGCCGGAGCGTCGGCCGAGGCGATGGTCCCCGAACGCTGCGTGCCGCTGTTCCGGGTCGGCTATTCGGT GAACCACTTCGTGCCGGTGGCCGGCAACCGGGCGGTGCTGCTGCCCGATTCCGCGGCCGCCATCGCCGCCATGGTCGCGG ACATCGATGCCGCTCAACACAGCGTGCATGTGCTGTTCTATATCTGGCTCGCCGACGGGAGCGGCCTGAAGGTGATGGAG GCGCTGAAGCGCGCCGCCGCGCGCGGCGTCGTCTGCCGGGCCATGGCCGATGATCTCGGCTCCCGGGCGCTGATCCGCTC CGCCCATTGGCGCGACATGGCGACGAGCGGGGTGAGGCTGGCGGCGGCGCTGCCGGTGGGCAATCCCCTGCTGCGGCTGT TCAAGGGCCGGATCGACATGCGCAATCACCGCAAGATCGTGGTGATCGACAATGCCGTCACCTATTGCGGCAGCCAGAAT TGCGCCGACGCCGCCTTCGCGGTGAAGGCCCGGTTCGCGCCCTGGGTCGATGTGATGGCCCGCTTTGAGGGGCCGGTGGT GCGGCAGAACCAGTATCTGTTCGCCAGCAACTGGATGGCGCAGACCGACGAGGATCTTGCGTCCCTGTTCGCCGAGCCGC TGCCTGCCCAGGTCCCGGGCTTCGTCGCGCAGGTGATCGGCTCGGGCGCCGGCGTGCGCTATTCGGCCATGCCGGAGACG TTCGTCGCGCTGATGAATGCGGCCCGGCGCGAACTGGTGATCACTACGCCCTATTACGTCCCGGATGAGCCGCTCCAGGC CGCTCTGTGCGCCAGCGCCCGGCGTGGGGTCGCGACCACCATCGTCTTTCCCGGGCGCAACGATTCCTGGATCGTGGCGG CCGCCAGCCGCAGCTATTATCGCGACCTGCTGGAGGCGGGCGTGGAAATCCGCGAATATGTCGGCGGCCTGCTGCACGCC AAGACGCTCACCCTCGACGGCGAGGTGACCCTGATCGGCTCCGCCAATATCGATCGCCGCAGCTTCGAGCTCAACGCGGA GAACAACATCCTCCTGCACGACGAAGCCTTCACCCGCGCGGTCCGGGCCCGCCAGCAGGTGTTCCTCGATGCCGCAACGC CGGTGACGCGGGCGCAAGTGGACGCCTACAGCGTGGGGCGGCGGCTCTGGAACAATGCCATCGCCATGCTCGGGCCGGTC CTGTAG
Upstream 100 bases:
>100_bases TCATCCGGCCGCGTCGCAACGCGCCGCAGCGCGGGCGGCGTTCGCGCAGGCGCCGAACATGGTTTAATGCGGGCTGCTTC GCTCAAGCGTGTGCCGCGAC
Downstream 100 bases:
>100_bases GTGCGCGATGCCGGGGGGCCAAACCGTCGGATTGGTATTTGCGAACGGCGCACGCGCTGATGTAAATTAAGGCATGCTCA CTTCCGCGCCACGCCCCAGC
Product: phospholipase D/transphosphatidylase
Products: NA
Alternate protein names: CL synthase [H]
Number of amino acids: Translated: 481; Mature: 481
Protein sequence:
>481_residues MHDSAVLAWMLFAAHASLQLVFIVRALLRPHREPSSRFAWVLVILLAPVVGVLAYILFGEVNLGRKPIERLRAALKALPP APDVAGASAEAMVPERCVPLFRVGYSVNHFVPVAGNRAVLLPDSAAAIAAMVADIDAAQHSVHVLFYIWLADGSGLKVME ALKRAAARGVVCRAMADDLGSRALIRSAHWRDMATSGVRLAAALPVGNPLLRLFKGRIDMRNHRKIVVIDNAVTYCGSQN CADAAFAVKARFAPWVDVMARFEGPVVRQNQYLFASNWMAQTDEDLASLFAEPLPAQVPGFVAQVIGSGAGVRYSAMPET FVALMNAARRELVITTPYYVPDEPLQAALCASARRGVATTIVFPGRNDSWIVAAASRSYYRDLLEAGVEIREYVGGLLHA KTLTLDGEVTLIGSANIDRRSFELNAENNILLHDEAFTRAVRARQQVFLDAATPVTRAQVDAYSVGRRLWNNAIAMLGPV L
Sequences:
>Translated_481_residues MHDSAVLAWMLFAAHASLQLVFIVRALLRPHREPSSRFAWVLVILLAPVVGVLAYILFGEVNLGRKPIERLRAALKALPP APDVAGASAEAMVPERCVPLFRVGYSVNHFVPVAGNRAVLLPDSAAAIAAMVADIDAAQHSVHVLFYIWLADGSGLKVME ALKRAAARGVVCRAMADDLGSRALIRSAHWRDMATSGVRLAAALPVGNPLLRLFKGRIDMRNHRKIVVIDNAVTYCGSQN CADAAFAVKARFAPWVDVMARFEGPVVRQNQYLFASNWMAQTDEDLASLFAEPLPAQVPGFVAQVIGSGAGVRYSAMPET FVALMNAARRELVITTPYYVPDEPLQAALCASARRGVATTIVFPGRNDSWIVAAASRSYYRDLLEAGVEIREYVGGLLHA KTLTLDGEVTLIGSANIDRRSFELNAENNILLHDEAFTRAVRARQQVFLDAATPVTRAQVDAYSVGRRLWNNAIAMLGPV L >Mature_481_residues MHDSAVLAWMLFAAHASLQLVFIVRALLRPHREPSSRFAWVLVILLAPVVGVLAYILFGEVNLGRKPIERLRAALKALPP APDVAGASAEAMVPERCVPLFRVGYSVNHFVPVAGNRAVLLPDSAAAIAAMVADIDAAQHSVHVLFYIWLADGSGLKVME ALKRAAARGVVCRAMADDLGSRALIRSAHWRDMATSGVRLAAALPVGNPLLRLFKGRIDMRNHRKIVVIDNAVTYCGSQN CADAAFAVKARFAPWVDVMARFEGPVVRQNQYLFASNWMAQTDEDLASLFAEPLPAQVPGFVAQVIGSGAGVRYSAMPET FVALMNAARRELVITTPYYVPDEPLQAALCASARRGVATTIVFPGRNDSWIVAAASRSYYRDLLEAGVEIREYVGGLLHA KTLTLDGEVTLIGSANIDRRSFELNAENNILLHDEAFTRAVRARQQVFLDAATPVTRAQVDAYSVGRRLWNNAIAMLGPV L
Specific function: Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol [H]
COG id: COG1502
COG function: function code I; Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 PLD phosphodiesterase domains [H]
Homologues:
Organism=Escherichia coli, GI1787502, Length=456, Percent_Identity=34.4298245614035, Blast_Score=270, Evalue=2e-73, Organism=Escherichia coli, GI1787007, Length=379, Percent_Identity=28.4960422163588, Blast_Score=119, Evalue=3e-28, Organism=Escherichia coli, GI87081826, Length=397, Percent_Identity=27.455919395466, Blast_Score=96, Evalue=6e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022924 - InterPro: IPR001736 [H]
Pfam domain/function: PF00614 PLDc [H]
EC number: 2.7.8.-
Molecular weight: Translated: 52268; Mature: 52268
Theoretical pI: Translated: 9.29; Mature: 9.29
Prosite motif: PS50035 PLD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHDSAVLAWMLFAAHASLQLVFIVRALLRPHREPSSRFAWVLVILLAPVVGVLAYILFGE CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC VNLGRKPIERLRAALKALPPAPDVAGASAEAMVPERCVPLFRVGYSVNHFVPVAGNRAVL CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCHHHHCCCCCCCEEEECCCEEEE LPDSAAAIAAMVADIDAAQHSVHVLFYIWLADGSGLKVMEALKRAAARGVVCRAMADDLG ECCCHHHHHHHHHHHHHHHCCEEEEEEEEEECCCCHHHHHHHHHHHHCCHHHHHHHHHCC SRALIRSAHWRDMATSGVRLAAALPVGNPLLRLFKGRIDMRNHRKIVVIDNAVTYCGSQN CHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHCCCCCCCCCEEEEEECCHHHCCCCC CADAAFAVKARFAPWVDVMARFEGPVVRQNQYLFASNWMAQTDEDLASLFAEPLPAQVPG CCHHHHHHHHHCCHHHHHHHHCCCCEEECCCEEEECCCCCCCHHHHHHHHCCCCCCCCHH FVAQVIGSGAGVRYSAMPETFVALMNAARRELVITTPYYVPDEPLQAALCASARRGVATT HHHHHHCCCCCCEECCCHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHCCCCEEE IVFPGRNDSWIVAAASRSYYRDLLEAGVEIREYVGGLLHAKTLTLDGEVTLIGSANIDRR EEECCCCCCEEEEECCHHHHHHHHHCCHHHHHHHHHHHHHEEEEECCCEEEEECCCCCCC SFELNAENNILLHDEAFTRAVRARQQVFLDAATPVTRAQVDAYSVGRRLWNNAIAMLGPV EEEECCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC L C >Mature Secondary Structure MHDSAVLAWMLFAAHASLQLVFIVRALLRPHREPSSRFAWVLVILLAPVVGVLAYILFGE CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC VNLGRKPIERLRAALKALPPAPDVAGASAEAMVPERCVPLFRVGYSVNHFVPVAGNRAVL CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCHHHHCCCCCCCEEEECCCEEEE LPDSAAAIAAMVADIDAAQHSVHVLFYIWLADGSGLKVMEALKRAAARGVVCRAMADDLG ECCCHHHHHHHHHHHHHHHCCEEEEEEEEEECCCCHHHHHHHHHHHHCCHHHHHHHHHCC SRALIRSAHWRDMATSGVRLAAALPVGNPLLRLFKGRIDMRNHRKIVVIDNAVTYCGSQN CHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHCCCCCCCCCEEEEEECCHHHCCCCC CADAAFAVKARFAPWVDVMARFEGPVVRQNQYLFASNWMAQTDEDLASLFAEPLPAQVPG CCHHHHHHHHHCCHHHHHHHHCCCCEEECCCEEEECCCCCCCHHHHHHHHCCCCCCCCHH FVAQVIGSGAGVRYSAMPETFVALMNAARRELVITTPYYVPDEPLQAALCASARRGVATT HHHHHHCCCCCCEECCCHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHCCCCEEE IVFPGRNDSWIVAAASRSYYRDLLEAGVEIREYVGGLLHAKTLTLDGEVTLIGSANIDRR EEECCCCCCEEEEECCHHHHHHHHHCCHHHHHHHHHHHHHEEEEECCCEEEEECCCCCCC SFELNAENNILLHDEAFTRAVRARQQVFLDAATPVTRAQVDAYSVGRRLWNNAIAMLGPV EEEECCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC L C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Transferring phosphorus-containing groups [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA