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The map label for this gene is ygiQ [C]

Identifier: 154244892

GI number: 154244892

Start: 1062627

End: 1064666

Strand: Reverse

Name: ygiQ [C]

Synonym: Xaut_0942

Alternate gene names: 154244892

Gene position: 1064666-1062627 (Counterclockwise)

Preceding gene: 154244893

Following gene: 154244881

Centisome position: 20.05

GC content: 67.55

Gene sequence:

>2040_bases
GTGGACGCCATGGACACCCACGCCGACGCCGCAAAACCCTTGAGTTCCTTGTCCCGCCACCGGCCGCAGTCCCACACGGC
GGCGCCATTCCTGCCCATGAGCCGCGCCGAGATGGCCGCGCTCGGCTGGGACGCCTGCGATATCGTGCTGGTCACCGGCG
ACGCCTATGTGGATCATCCAAGCTTCGGCATGGCCATCATCGGCAGGCTGCTGGAAGCCCAGGGCTTCCGCGTCGGCATC
ATCGCGCAGCCCGACTGGCAGTCGGCGGAGCCGTTCAAGGCGCTGGGCAAGCCGACCCTGTTCTTCGGCGTCACCGGCGG
CAACCTGGACTCGATGGTCAACCGCTACACGTCCGACCGCCGGCTGCGCCACGACGACGCCTATACGGCCGGCGGCGAGG
GCGGAAAAAGGCCGGACCGCTGCACCATCGTCTACACCCAGCGCTGCCGCGAGGCGTACAAGGACGTGCCCATCGTGCTC
GGCGGCATCGAGGCATCGCTGCGCCGCATCGCCCACTACGACTACTGGTCCGACAAGGTGCGCCGCTCGATCCTGGCGGA
CGCCAAGGCGGATCTGCTCCTCTACGGCAATGCCGAGCGTGCCGTCGTGGAGGTGGCGAACCGCCTCGCCGGCGGCGAGG
CGCCGCGCGATCTGAATTCCATAAGGGGCGTCGCCCTGTTCCGCCGCGTGCCGGAAAATTACACCGAGTTGCATGCCGAC
GATCTCGACTCCTCCGATGACGGGGCTGCCCGTCGCCCCGGTAACGTGGTGATCCGGCTGCCAGCGTATGAGCAGGTCGA
GCAGGACAAGGAAGCCTATGCCCGCGCCTCCCGCGTGCTGCACCGGGAGAGCAATCCCGGTAATGCGCGCCCGCTCGTGC
AGCGCCACGGCGACCGCGACCTGTGGCTGAACCCGCCGCCGATCCCGCTGACCTCCGCCGAGATGGACGCGGTCTACGAC
CTGCCCTACGCCCGCGCGCCGCATCCCTCCTACGGCGATGCGAAGATCCCGGCCTGGGACATGATCAAGTTCTCGGTGAC
CATCATGCGCGGTTGCTTCGGCGGCTGCACGTTCTGCTCCATCACCGAGCACGAGGGCCGCATCATCCAGAACCGCTCGG
AGGGCTCGATCCTGCGCGAGATCGAGCTGATCCGGGACAAGACCCCGGGGTTCACGGGCGTGATCTCGGACATCGGCGGG
CCCACCGCCAACATGTACCGGATGGCCTGCAAGGACCCCAAGATCGAGGCGGCGTGCCGGCGGCCGTCCTGCGTCTTTCC
CGACATCTGCCCGAACCTGAACACCTCCCACGACGACCTGATCCGGCTCTATCGGAAGGTCCGCGAGGTGGAGGGCGTCA
AGAAGGTGATGGTCGCCTCCGGCGTGCGCTATGACCTGGCGGTGAAGAGCCCCGAATATATCAAGGAGCTGGTGACCCAT
CACGTCGGCGGCTACCTGAAGATCGCGCCCGAGCACACCGAGCGCGGCCCGCTCGACAAGATGATGAAGCCGGGCATCGG
CACCTATGACCGCTTCAAGGAGATGTTCGACGCCGCGGTGAAGCAGGCCGGCAAGAAATACTATCTCATCCCGTATTTCA
TTGCCGCGCATCCGGGCACGACCGACGAGGACATGATGAACCTCGCGCTCTGGCTCAAGAAGAACCGCTATCGCGCCGAT
CAGGTGCAGACGTTCCTGCCGTCTCCCATGGCCACGGCCACCGCCATGTACCATACCGGCGTCAATCCGCTGCGGGGCGT
GCGGCGGGGGGCGAGCGACAAGGTGGTGACGGTGACGGGGCTGCGCCAGCGCCGCCTGCACAAGGCGTTCCTGCGCTACC
ACGATCCCGAGAACTGGCCGCTGCTGCGCGAGGCGCTGAAGCAGATGGGCCGCGCCGATCTGATCGGCTCGCGCCCCGAC
CAATTGGTGCCGGCCCACCAGCCGCCCGGCACCGGCAAGGCCGCCGGCACGCGGCGCCCCGTGCGCAGCACCGCCGGGAC
GCAGCGCTTCACCACCAAGGGCGTTCCCATCCGCAAGTAA

Upstream 100 bases:

>100_bases
TTCGGCTTCATTCGCGCCGGCGCCGTGTGGCCATGGGCAAGGGTCTGGGTCCGCGGCTCCGGGCATGGTGAGTTGAATTC
GCCGGGGTGGAGCCTTATGC

Downstream 100 bases:

>100_bases
AGGTCCGGTGGGCAGGCGGGGTTTCCCGCATTGCCCGGCGACGATTTTTACGCGGGCGCTGCCGCGGGCTCGCGCTGCAG
GACGGCGGCAAAAAACCCGT

Product: radical SAM domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 679; Mature: 679

Protein sequence:

>679_residues
MDAMDTHADAAKPLSSLSRHRPQSHTAAPFLPMSRAEMAALGWDACDIVLVTGDAYVDHPSFGMAIIGRLLEAQGFRVGI
IAQPDWQSAEPFKALGKPTLFFGVTGGNLDSMVNRYTSDRRLRHDDAYTAGGEGGKRPDRCTIVYTQRCREAYKDVPIVL
GGIEASLRRIAHYDYWSDKVRRSILADAKADLLLYGNAERAVVEVANRLAGGEAPRDLNSIRGVALFRRVPENYTELHAD
DLDSSDDGAARRPGNVVIRLPAYEQVEQDKEAYARASRVLHRESNPGNARPLVQRHGDRDLWLNPPPIPLTSAEMDAVYD
LPYARAPHPSYGDAKIPAWDMIKFSVTIMRGCFGGCTFCSITEHEGRIIQNRSEGSILREIELIRDKTPGFTGVISDIGG
PTANMYRMACKDPKIEAACRRPSCVFPDICPNLNTSHDDLIRLYRKVREVEGVKKVMVASGVRYDLAVKSPEYIKELVTH
HVGGYLKIAPEHTERGPLDKMMKPGIGTYDRFKEMFDAAVKQAGKKYYLIPYFIAAHPGTTDEDMMNLALWLKKNRYRAD
QVQTFLPSPMATATAMYHTGVNPLRGVRRGASDKVVTVTGLRQRRLHKAFLRYHDPENWPLLREALKQMGRADLIGSRPD
QLVPAHQPPGTGKAAGTRRPVRSTAGTQRFTTKGVPIRK

Sequences:

>Translated_679_residues
MDAMDTHADAAKPLSSLSRHRPQSHTAAPFLPMSRAEMAALGWDACDIVLVTGDAYVDHPSFGMAIIGRLLEAQGFRVGI
IAQPDWQSAEPFKALGKPTLFFGVTGGNLDSMVNRYTSDRRLRHDDAYTAGGEGGKRPDRCTIVYTQRCREAYKDVPIVL
GGIEASLRRIAHYDYWSDKVRRSILADAKADLLLYGNAERAVVEVANRLAGGEAPRDLNSIRGVALFRRVPENYTELHAD
DLDSSDDGAARRPGNVVIRLPAYEQVEQDKEAYARASRVLHRESNPGNARPLVQRHGDRDLWLNPPPIPLTSAEMDAVYD
LPYARAPHPSYGDAKIPAWDMIKFSVTIMRGCFGGCTFCSITEHEGRIIQNRSEGSILREIELIRDKTPGFTGVISDIGG
PTANMYRMACKDPKIEAACRRPSCVFPDICPNLNTSHDDLIRLYRKVREVEGVKKVMVASGVRYDLAVKSPEYIKELVTH
HVGGYLKIAPEHTERGPLDKMMKPGIGTYDRFKEMFDAAVKQAGKKYYLIPYFIAAHPGTTDEDMMNLALWLKKNRYRAD
QVQTFLPSPMATATAMYHTGVNPLRGVRRGASDKVVTVTGLRQRRLHKAFLRYHDPENWPLLREALKQMGRADLIGSRPD
QLVPAHQPPGTGKAAGTRRPVRSTAGTQRFTTKGVPIRK
>Mature_679_residues
MDAMDTHADAAKPLSSLSRHRPQSHTAAPFLPMSRAEMAALGWDACDIVLVTGDAYVDHPSFGMAIIGRLLEAQGFRVGI
IAQPDWQSAEPFKALGKPTLFFGVTGGNLDSMVNRYTSDRRLRHDDAYTAGGEGGKRPDRCTIVYTQRCREAYKDVPIVL
GGIEASLRRIAHYDYWSDKVRRSILADAKADLLLYGNAERAVVEVANRLAGGEAPRDLNSIRGVALFRRVPENYTELHAD
DLDSSDDGAARRPGNVVIRLPAYEQVEQDKEAYARASRVLHRESNPGNARPLVQRHGDRDLWLNPPPIPLTSAEMDAVYD
LPYARAPHPSYGDAKIPAWDMIKFSVTIMRGCFGGCTFCSITEHEGRIIQNRSEGSILREIELIRDKTPGFTGVISDIGG
PTANMYRMACKDPKIEAACRRPSCVFPDICPNLNTSHDDLIRLYRKVREVEGVKKVMVASGVRYDLAVKSPEYIKELVTH
HVGGYLKIAPEHTERGPLDKMMKPGIGTYDRFKEMFDAAVKQAGKKYYLIPYFIAAHPGTTDEDMMNLALWLKKNRYRAD
QVQTFLPSPMATATAMYHTGVNPLRGVRRGASDKVVTVTGLRQRRLHKAFLRYHDPENWPLLREALKQMGRADLIGSRPD
QLVPAHQPPGTGKAAGTRRPVRSTAGTQRFTTKGVPIRK

Specific function: Unknown

COG id: COG1032

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0313 family [H]

Homologues:

Organism=Escherichia coli, GI48994917, Length=676, Percent_Identity=62.1301775147929, Blast_Score=874, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006638
- InterPro:   IPR020612
- InterPro:   IPR007197
- InterPro:   IPR013704
- InterPro:   IPR022946 [H]

Pfam domain/function: PF04055 Radical_SAM; PF08497 Radical_SAM_N [H]

EC number: NA

Molecular weight: Translated: 75595; Mature: 75595

Theoretical pI: Translated: 9.51; Mature: 9.51

Prosite motif: PS01278 UPF0004

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDAMDTHADAAKPLSSLSRHRPQSHTAAPFLPMSRAEMAALGWDACDIVLVTGDAYVDHP
CCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCEEEEEEECCCEECCC
SFGMAIIGRLLEAQGFRVGIIAQPDWQSAEPFKALGKPTLFFGVTGGNLDSMVNRYTSDR
CHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHCCCEEEEEECCCCHHHHHHHHHHCC
RLRHDDAYTAGGEGGKRPDRCTIVYTQRCREAYKDVPIVLGGIEASLRRIAHYDYWSDKV
HHCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHCCCCEEEECHHHHHHHHHHCCHHHHHH
RRSILADAKADLLLYGNAERAVVEVANRLAGGEAPRDLNSIRGVALFRRVPENYTELHAD
HHHHHHCCCCCEEEECCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHC
DLDSSDDGAARRPGNVVIRLPAYEQVEQDKEAYARASRVLHRESNPGNARPLVQRHGDRD
CCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCC
LWLNPPPIPLTSAEMDAVYDLPYARAPHPSYGDAKIPAWDMIKFSVTIMRGCFGGCTFCS
CCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEE
ITEHEGRIIQNRSEGSILREIELIRDKTPGFTGVISDIGGPTANMYRMACKDPKIEAACR
EECCCCCEEECCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHCCCCCCHHHHC
RPSCVFPDICPNLNTSHDDLIRLYRKVREVEGVKKVMVASGVRYDLAVKSPEYIKELVTH
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH
HVGGYLKIAPEHTERGPLDKMMKPGIGTYDRFKEMFDAAVKQAGKKYYLIPYFIAAHPGT
HCCCEEEECCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCC
TDEDMMNLALWLKKNRYRADQVQTFLPSPMATATAMYHTGVNPLRGVRRGASDKVVTVTG
CHHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHCCCCCCEEEECC
LRQRRLHKAFLRYHDPENWPLLREALKQMGRADLIGSRPDQLVPAHQPPGTGKAAGTRRP
HHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
VRSTAGTQRFTTKGVPIRK
HHHCCCCCCEEECCCCCCC
>Mature Secondary Structure
MDAMDTHADAAKPLSSLSRHRPQSHTAAPFLPMSRAEMAALGWDACDIVLVTGDAYVDHP
CCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCEEEEEEECCCEECCC
SFGMAIIGRLLEAQGFRVGIIAQPDWQSAEPFKALGKPTLFFGVTGGNLDSMVNRYTSDR
CHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHCCCEEEEEECCCCHHHHHHHHHHCC
RLRHDDAYTAGGEGGKRPDRCTIVYTQRCREAYKDVPIVLGGIEASLRRIAHYDYWSDKV
HHCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHCCCCEEEECHHHHHHHHHHCCHHHHHH
RRSILADAKADLLLYGNAERAVVEVANRLAGGEAPRDLNSIRGVALFRRVPENYTELHAD
HHHHHHCCCCCEEEECCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHC
DLDSSDDGAARRPGNVVIRLPAYEQVEQDKEAYARASRVLHRESNPGNARPLVQRHGDRD
CCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCC
LWLNPPPIPLTSAEMDAVYDLPYARAPHPSYGDAKIPAWDMIKFSVTIMRGCFGGCTFCS
CCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEE
ITEHEGRIIQNRSEGSILREIELIRDKTPGFTGVISDIGGPTANMYRMACKDPKIEAACR
EECCCCCEEECCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHCCCCCCHHHHC
RPSCVFPDICPNLNTSHDDLIRLYRKVREVEGVKKVMVASGVRYDLAVKSPEYIKELVTH
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH
HVGGYLKIAPEHTERGPLDKMMKPGIGTYDRFKEMFDAAVKQAGKKYYLIPYFIAAHPGT
HCCCEEEECCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCC
TDEDMMNLALWLKKNRYRADQVQTFLPSPMATATAMYHTGVNPLRGVRRGASDKVVTVTG
CHHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHCCCCCCEEEECC
LRQRRLHKAFLRYHDPENWPLLREALKQMGRADLIGSRPDQLVPAHQPPGTGKAAGTRRP
HHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
VRSTAGTQRFTTKGVPIRK
HHHCCCCCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12597275 [H]