Definition Xanthobacter autotrophicus Py2 chromosome, complete genome.
Accession NC_009720
Length 5,308,934

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The map label for this gene is 154244830

Identifier: 154244830

GI number: 154244830

Start: 980371

End: 981747

Strand: Reverse

Name: 154244830

Synonym: Xaut_0880

Alternate gene names: NA

Gene position: 981747-980371 (Counterclockwise)

Preceding gene: 154244832

Following gene: 154244821

Centisome position: 18.49

GC content: 69.06

Gene sequence:

>1377_bases
ATGAATCTCTATGCCAAGCTCAAGGCACGCGCCGCCGCCGGCAGGCCGGTGCGGGTCGGCGTCATCGGCGCCGGCAAGTT
CGGCTCCATGTTCCTGTCCCAGGGGCCGCGCACCCCCGGCCTCCACATCGTGGGTATCGCCGATCTCGACGTGAACCGCG
CCCGAGCCTCCTGCGCCCGCGTGGACTGGCCGGCGGAGCGCTACGCCGCGCGCTCGTTCGCGGAGGCCATGGCCAGCGGC
AGCACCTTCATCACCGACGATGCCGAGGCGCTGATCGCCACCGGCGGCATGGATGTCATCGTCGAGGCCACCGGCAATCC
GGGCGCCGGCATCCGCCACGCTTTGCTGTGCTGCAAGCATGGCCGCCACATCGTGATGGTGAACGTGGAGGCCGACGCCC
TCGCCGGCCCGCTGCTGGCCCGGCATGCGGCGGCGGCCGGCATCGTCTATTCCTTCGCCTATGGCGACCAGCCCGCCCTC
ATCGCCGAGATCGTGGACTGGGCCCGCACCGCCGGCCTTGAGGTGATCTGCGCCGGCAAGGGTACGAAGTATTTGCCCGC
CTACCACCAGTCGACGCCAGAGACGGTGTGGGGCCATTACGGCTTCAGCCCGGAAGAGGTGGCGGGGGGCGATTTCAACG
CCCAGATGTTCAACTCCTTTCTGGACGGCACCAAATCGGCGCTGGAAATGGCGGCGGTGGCCAATGGCTGCGATCTGGAG
CCGGCCGCTGACGGCCTCAGCTTCCCGCCCTGCGGCAAGGATGACCTGCCCACCATCCTGCGCCCGCGCGCCGATGGCGG
CATCCTCCCCCACAAGGGCACGGTGGAAGTGGTCTCCTCGCTGGAGCGCGACGGCCGCCCGGTGTTCCGGGATCTCAGGT
GGGGCGTCTATGCCACCTTCGAGGCGCCCTCGGATTATGTGAAGCAGTGCTTCGCCCAATATGGCCTGAAGACCGACTCC
ACCGGGCGCTACGCCACCATGTACAAGCCCTATCACCTGATCGGGCTTGAGCTGGGCATCTCCATCGCCTCCGCCGCGCT
GCGGGGCGAGGCCACCGGCAGCACCCAGGGCTTCCGGGGCGATGTGGTCGCCACCGCCAAGCGCGACCTGAAGCCCGGCG
AGAAGCTCGATGGCGAGGGCGGCTTCATGGTCTACGGCAAGCTCATGCCTGCCAGCCTCTCGCTGGCCCATGGCGGCCTG
CCCATCGGCCTTGCCCATAACGTGGTGCTGAAGAACCCGGTCGCCGGCGGCCAGCCGGTGCGCTGGGCGGATGTCACCTT
CGACGAGACCCAGCAGGCGGTGAAGGTGCGCCGCGAGATGGAAAGCCTGTTCCGCGCCGCCGACAGCGCCGGCCAAAAGG
CCCCCGCTGCCGCGTGA

Upstream 100 bases:

>100_bases
GTGGCGATTCAACCATTTATATTGGGAAAACCCCGCCTTACACCTGTGCGACGGATCGCGCGGCCCAAAGACCGCGATGC
CAACGACACGGGAGAAAGCC

Downstream 100 bases:

>100_bases
GGCTGCCGGCAGATCGCGGTGCGGCCTGCCAACGCCTCGTCACGCCTGGATATCAATAGGGTGGCGCTCAGAGCCCGTTT
GAAAGCTCGGCCGGTTGGGC

Product: SAF domain-containing protein

Products: NA

Alternate protein names: SAF Domain Protein; Homoserine Dehydrogenase; NAD(P)-Dependent Oxidoreductase; Dihydrodipicolinate Reductase; Oxidoreductase; Oxidoreductase Domain Protein; Oxidoreductase Domain-Containing Protein; Oxidoreductase-Like; StrU Protein; Saf Domain Protein; SAF Domain Family Protein

Number of amino acids: Translated: 458; Mature: 458

Protein sequence:

>458_residues
MNLYAKLKARAAAGRPVRVGVIGAGKFGSMFLSQGPRTPGLHIVGIADLDVNRARASCARVDWPAERYAARSFAEAMASG
STFITDDAEALIATGGMDVIVEATGNPGAGIRHALLCCKHGRHIVMVNVEADALAGPLLARHAAAAGIVYSFAYGDQPAL
IAEIVDWARTAGLEVICAGKGTKYLPAYHQSTPETVWGHYGFSPEEVAGGDFNAQMFNSFLDGTKSALEMAAVANGCDLE
PAADGLSFPPCGKDDLPTILRPRADGGILPHKGTVEVVSSLERDGRPVFRDLRWGVYATFEAPSDYVKQCFAQYGLKTDS
TGRYATMYKPYHLIGLELGISIASAALRGEATGSTQGFRGDVVATAKRDLKPGEKLDGEGGFMVYGKLMPASLSLAHGGL
PIGLAHNVVLKNPVAGGQPVRWADVTFDETQQAVKVRREMESLFRAADSAGQKAPAAA

Sequences:

>Translated_458_residues
MNLYAKLKARAAAGRPVRVGVIGAGKFGSMFLSQGPRTPGLHIVGIADLDVNRARASCARVDWPAERYAARSFAEAMASG
STFITDDAEALIATGGMDVIVEATGNPGAGIRHALLCCKHGRHIVMVNVEADALAGPLLARHAAAAGIVYSFAYGDQPAL
IAEIVDWARTAGLEVICAGKGTKYLPAYHQSTPETVWGHYGFSPEEVAGGDFNAQMFNSFLDGTKSALEMAAVANGCDLE
PAADGLSFPPCGKDDLPTILRPRADGGILPHKGTVEVVSSLERDGRPVFRDLRWGVYATFEAPSDYVKQCFAQYGLKTDS
TGRYATMYKPYHLIGLELGISIASAALRGEATGSTQGFRGDVVATAKRDLKPGEKLDGEGGFMVYGKLMPASLSLAHGGL
PIGLAHNVVLKNPVAGGQPVRWADVTFDETQQAVKVRREMESLFRAADSAGQKAPAAA
>Mature_458_residues
MNLYAKLKARAAAGRPVRVGVIGAGKFGSMFLSQGPRTPGLHIVGIADLDVNRARASCARVDWPAERYAARSFAEAMASG
STFITDDAEALIATGGMDVIVEATGNPGAGIRHALLCCKHGRHIVMVNVEADALAGPLLARHAAAAGIVYSFAYGDQPAL
IAEIVDWARTAGLEVICAGKGTKYLPAYHQSTPETVWGHYGFSPEEVAGGDFNAQMFNSFLDGTKSALEMAAVANGCDLE
PAADGLSFPPCGKDDLPTILRPRADGGILPHKGTVEVVSSLERDGRPVFRDLRWGVYATFEAPSDYVKQCFAQYGLKTDS
TGRYATMYKPYHLIGLELGISIASAALRGEATGSTQGFRGDVVATAKRDLKPGEKLDGEGGFMVYGKLMPASLSLAHGGL
PIGLAHNVVLKNPVAGGQPVRWADVTFDETQQAVKVRREMESLFRAADSAGQKAPAAA

Specific function: Unknown

COG id: COG4091

COG function: function code E; Predicted homoserine dehydrogenase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48308; Mature: 48308

Theoretical pI: Translated: 7.09; Mature: 7.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLYAKLKARAAAGRPVRVGVIGAGKFGSMFLSQGPRTPGLHIVGIADLDVNRARASCAR
CCCHHHHHHHHCCCCCEEEEEEECCCHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHC
VDWPAERYAARSFAEAMASGSTFITDDAEALIATGGMDVIVEATGNPGAGIRHALLCCKH
CCCCHHHHHHHHHHHHHHCCCEEEECCCCEEEEECCCEEEEEECCCCCCHHHHHHHHHHC
GRHIVMVNVEADALAGPLLARHAAAAGIVYSFAYGDQPALIAEIVDWARTAGLEVICAGK
CCEEEEEEECHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHCCCEEEECCC
GTKYLPAYHQSTPETVWGHYGFSPEEVAGGDFNAQMFNSFLDGTKSALEMAAVANGCDLE
CCCCCCHHCCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
PAADGLSFPPCGKDDLPTILRPRADGGILPHKGTVEVVSSLERDGRPVFRDLRWGVYATF
CCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHCCCCEEEEE
EAPSDYVKQCFAQYGLKTDSTGRYATMYKPYHLIGLELGISIASAALRGEATGSTQGFRG
CCCHHHHHHHHHHHCCCCCCCCCEEEEECCEEEEEEHHHHHHHHHHHCCCCCCCCCCCCC
DVVATAKRDLKPGEKLDGEGGFMVYGKLMPASLSLAHGGLPIGLAHNVVLKNPVAGGQPV
CEEEEHHHCCCCCCCCCCCCCEEEEEEECCCEEEHHCCCCCEEHCCCEEEECCCCCCCCE
RWADVTFDETQQAVKVRREMESLFRAADSAGQKAPAAA
EEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MNLYAKLKARAAAGRPVRVGVIGAGKFGSMFLSQGPRTPGLHIVGIADLDVNRARASCAR
CCCHHHHHHHHCCCCCEEEEEEECCCHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHC
VDWPAERYAARSFAEAMASGSTFITDDAEALIATGGMDVIVEATGNPGAGIRHALLCCKH
CCCCHHHHHHHHHHHHHHCCCEEEECCCCEEEEECCCEEEEEECCCCCCHHHHHHHHHHC
GRHIVMVNVEADALAGPLLARHAAAAGIVYSFAYGDQPALIAEIVDWARTAGLEVICAGK
CCEEEEEEECHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHCCCEEEECCC
GTKYLPAYHQSTPETVWGHYGFSPEEVAGGDFNAQMFNSFLDGTKSALEMAAVANGCDLE
CCCCCCHHCCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
PAADGLSFPPCGKDDLPTILRPRADGGILPHKGTVEVVSSLERDGRPVFRDLRWGVYATF
CCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHCCCCEEEEE
EAPSDYVKQCFAQYGLKTDSTGRYATMYKPYHLIGLELGISIASAALRGEATGSTQGFRG
CCCHHHHHHHHHHHCCCCCCCCCEEEEECCEEEEEEHHHHHHHHHHHCCCCCCCCCCCCC
DVVATAKRDLKPGEKLDGEGGFMVYGKLMPASLSLAHGGLPIGLAHNVVLKNPVAGGQPV
CEEEEHHHCCCCCCCCCCCCCEEEEEEECCCEEEHHCCCCCEEHCCCEEEECCCCCCCCE
RWADVTFDETQQAVKVRREMESLFRAADSAGQKAPAAA
EEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA