| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is tal [H]
Identifier: 154244785
GI number: 154244785
Start: 933144
End: 933893
Strand: Direct
Name: tal [H]
Synonym: Xaut_0835
Alternate gene names: 154244785
Gene position: 933144-933893 (Clockwise)
Preceding gene: 154244783
Following gene: 154244786
Centisome position: 17.58
GC content: 67.47
Gene sequence:
>750_bases ATGTCCGTGAAGCTCAGCGACCTGAAGGTGAAGCTGTTCACCGACGGGGCCGACAAGGCGCAGATTGTGGAAATGGCCAA GCAGCCCCACATCGCCGGCTTCACCACCAATCCGTCCCTGCTGCGCAAGGCCGGCGTGACCGATTATGAGGCCTATGCCC GCGATCTCGTCGCCGCCGTGCCGGACCGGCACATCTCGTTCGAGGTGTTCTCCGACGACATCCCGGAAATCCGCGCCCAG GCCCGCGTCATCGCCACCTGGGGCGAGCATGTGCACGTCAAGCTCCCGGTCTCCACCACCCGTGGCGAGACGCTGTACGA CCTGGTGCGGGACCTGGTGAACGACGGCGTGAAGGTGAACCTCACTGCCATCTTCGACGTGCCCCAGGTGGAAGAGGGTG TGAAGGCGCTGGCTGGTGGCGCCCCCTCCATCATCTCGGTGTTCGCCGGGCGCCTCGCCGATCTCGGCATCGACTACAAG CCCGCCATCTCGCGGGCGGTGGCGCTGGCCAACGCGACCAACAACGTGGAGGTCATCTGGGCTTCCACCCGCGAGGTGTG GAACGTGATCGAGGCGGACGAGCTGGGCTGCCACATCATCACCGCCCCCGCTGACGTGCTGAAGAAGCTTCCGGCGCTGG GCTCGCGCACCGCCGCCGAGCTGTCCCTCGACGCGGTGAAAGCCTTCCGCGCCGATGCGCTGGCCGCCGGCCTGACCCTG GACCTCAAGGGCCGCGCCGCCGCCGAGTGA
Upstream 100 bases:
>100_bases GCTGCCGCACGGGCGGGCGATTATCCGCCCGCCTTGCATTGCGGCGGCGTCGGCCGCTGCTCTAGGATGCGGGCCGAAAC GGGATCAAGGGAGTAGATGC
Downstream 100 bases:
>100_bases CTTTTTCGGGGCACTGCCTGCGTTGAAGGCAGGCCCCGGCATTGCACACATCGCGCGCGCTGTTACACTGGCCGCAAGGC GCAGCCGGTCGCTGACCCAG
Product: putative translaldolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 249; Mature: 248
Protein sequence:
>249_residues MSVKLSDLKVKLFTDGADKAQIVEMAKQPHIAGFTTNPSLLRKAGVTDYEAYARDLVAAVPDRHISFEVFSDDIPEIRAQ ARVIATWGEHVHVKLPVSTTRGETLYDLVRDLVNDGVKVNLTAIFDVPQVEEGVKALAGGAPSIISVFAGRLADLGIDYK PAISRAVALANATNNVEVIWASTREVWNVIEADELGCHIITAPADVLKKLPALGSRTAAELSLDAVKAFRADALAAGLTL DLKGRAAAE
Sequences:
>Translated_249_residues MSVKLSDLKVKLFTDGADKAQIVEMAKQPHIAGFTTNPSLLRKAGVTDYEAYARDLVAAVPDRHISFEVFSDDIPEIRAQ ARVIATWGEHVHVKLPVSTTRGETLYDLVRDLVNDGVKVNLTAIFDVPQVEEGVKALAGGAPSIISVFAGRLADLGIDYK PAISRAVALANATNNVEVIWASTREVWNVIEADELGCHIITAPADVLKKLPALGSRTAAELSLDAVKAFRADALAAGLTL DLKGRAAAE >Mature_248_residues SVKLSDLKVKLFTDGADKAQIVEMAKQPHIAGFTTNPSLLRKAGVTDYEAYARDLVAAVPDRHISFEVFSDDIPEIRAQA RVIATWGEHVHVKLPVSTTRGETLYDLVRDLVNDGVKVNLTAIFDVPQVEEGVKALAGGAPSIISVFAGRLADLGIDYKP AISRAVALANATNNVEVIWASTREVWNVIEADELGCHIITAPADVLKKLPALGSRTAAELSLDAVKAFRADALAAGLTLD LKGRAAAE
Specific function: Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway [H]
COG id: COG0176
COG function: function code G; Transaldolase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transaldolase family. Type 3B subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR001585 - InterPro: IPR004731 - InterPro: IPR022999 - InterPro: IPR018225 [H]
Pfam domain/function: PF00923 Transaldolase [H]
EC number: =2.2.1.2 [H]
Molecular weight: Translated: 26605; Mature: 26473
Theoretical pI: Translated: 5.37; Mature: 5.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVKLSDLKVKLFTDGADKAQIVEMAKQPHIAGFTTNPSLLRKAGVTDYEAYARDLVAAV CCEEECCEEEEEEECCCCHHHHHHHHCCCCCEEECCCHHHHHHCCCCHHHHHHHHHHHHC PDRHISFEVFSDDIPEIRAQARVIATWGEHVHVKLPVSTTRGETLYDLVRDLVNDGVKVN CCCCEEEEECCCCHHHHHHHEEEEEECCCEEEEEEECCCCCCHHHHHHHHHHHCCCEEEE LTAIFDVPQVEEGVKALAGGAPSIISVFAGRLADLGIDYKPAISRAVALANATNNVEVIW EEEEECCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCEEEEE ASTREVWNVIEADELGCHIITAPADVLKKLPALGSRTAAELSLDAVKAFRADALAAGLTL ECHHHHHHHHHHCCCCEEEEECCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCEE DLKGRAAAE EECCCCCCC >Mature Secondary Structure SVKLSDLKVKLFTDGADKAQIVEMAKQPHIAGFTTNPSLLRKAGVTDYEAYARDLVAAV CEEECCEEEEEEECCCCHHHHHHHHCCCCCEEECCCHHHHHHCCCCHHHHHHHHHHHHC PDRHISFEVFSDDIPEIRAQARVIATWGEHVHVKLPVSTTRGETLYDLVRDLVNDGVKVN CCCCEEEEECCCCHHHHHHHEEEEEECCCEEEEEEECCCCCCHHHHHHHHHHHCCCEEEE LTAIFDVPQVEEGVKALAGGAPSIISVFAGRLADLGIDYKPAISRAVALANATNNVEVIW EEEEECCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCEEEEE ASTREVWNVIEADELGCHIITAPADVLKKLPALGSRTAAELSLDAVKAFRADALAAGLTL ECHHHHHHHHHHCCCCEEEEECCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCEE DLKGRAAAE EECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA