| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is 154244633
Identifier: 154244633
GI number: 154244633
Start: 770353
End: 772899
Strand: Direct
Name: 154244633
Synonym: Xaut_0682
Alternate gene names: NA
Gene position: 770353-772899 (Clockwise)
Preceding gene: 154244632
Following gene: 154244636
Centisome position: 14.51
GC content: 58.93
Gene sequence:
>2547_bases GTGACAGCTTACAAAAAGAAACTCATTGAGGTCGCGCTTCCGCTCGAAGCAATCAACGCGGCCTCGGCGCGGGAAAAGTC GATCCGACATGGGCATCCGTCCACTCTGCATTTGTGGTGGGCGCGGCGGCCGTTGGCGGCATGTCGGGCTGTACTTTTCG CCCAGCTCGTCGACGACCCTTCTTCTCGCGTCGATGAACTGCTCGCCGATTCGAAGCTCCGTGCTCACGCGGAGGCGGAG CTACCAGAGCGCCTAGCCGCCTGGGAGAACAGCAAGGCCTCGGCGCAAGGGGCGGCGGCCAACGCGCCTGAGCCGACGCT GGAGGATGTGGCGGTCGAGATCGAGCGCAGGCGGCTATTCGAGATCATCGAGGAACTGGTGAAGTGGGAGAACTCGACCA ACGAGGAAGTGCTGGAACGCGCGCGGGCCGAAATTCGCAAGAGCTGTGGCGGCGAGCTGCCCGCAGTCTATGACCCGTTT TCGGGTGGTGGTTCGATCCCGCTCGAGGCGCAGCGGCTGGGCCTGCCCGCCTATGGGTCCGACCTGAACCCGGTCGCGGT GATGATCGGCAAGGCGACGATCGAGATCCCGCCGAAGTTCAAGGACAAGGAACCGATCCATCCCGACGTGAAGGGCCGTC AATTCTACCGCAACGCCGAGGGGCTGGCTGAAGACGTCAAATACTATGGCGAATGGATGCGTGAAAAAGCTTGGGACCGC ATCGGGCATCTCTATCCTCAGGTGGAACTGCCGAAGGAAATCGGCGGTGGCCAGACAATGGTCATAGCCTGGATCTGGGC ACGGACGGTGCCGAGCCCAGATCCGGCGTTTGCGGATGTGCAGGTACCGATCGCGTCGAGCTTCCTGCTCAGCCGCAAAG CCGGGAAGGAAGCCTGGGTCGAACCTATAATTGACAAGCAAGCTAAGACCATCGCCTACCGGATCAGATATGGCGGCACC AAAGCCGAGATGGCTACCGCAAAGGATGGCACCAAGGCCGGACGCGGCGCAAATTTTCGTTGCATCATCTCAGATACGGC CATCACGCCGAAGCACATCACTTCCGCTGCAAAATCAGGAAAGATGGGCCAAGTTCTCATCGCGATTGTAGGGGAAGGTA AAGGTGGCCGCGCTTATGTCTCGCCGTCTGCCGAGCATGAAACCGTTGCCTTTTCTGCCGGACCGAGTTGGAAGCCTGAA CAGCGTCAGCCCAAGAACCCACGCTGGTTTTCTCCGCCAGCGTACGGAATGGACACTTTTGGCGACCTGTTCACCGACCG GCAGTTGGTGGCGCTGAACACCTTCAGCGATCTGGTACATGAGGTGCGGACGCAGATTGAGGCCGACGCACAGAGGGCTG GCCTCTCCTCGGATCCGACCGCGCTGCGAGATGGCGGCAAGGGTGCCAAGGCCTATGCCGAAGCGGTGAGTGTGTATTTG GCCTTCGGACTATCCAAGGCGACTGATTATCACTCATCAATAACCACATGGCACAATGGACGCGAAATCATTCGCAACAC TTTCGGTCGGCAAGCTCTTCCAATGACTTGGGACTTTACCGAGGCAAACCCCTTTTCTTCGTCAACCGGAAACTGGTTGA ACTGCATCGAATGGGGAGTGAAAACCCTCGCTGCGCTTGTGACTGCTGCGGGCGGAACCGAACGCCAACACGATGCTCAG ACCGTCGATTATCCGCCGGAAACCGTAATTTCTACCGATCCGCCCTACTACGACAATATCGGTTACGCTGACCTGTCGGA TTTCTTTTTCTGCTGGCTGAAGCCGGTTATCCGATCGGTTTACCCTGAAATTTTTGGCAGCATTGCCACACCCAAGTCGG AAGAGCTGGTCGCCACCCCCTATCGCCATGGTGGGAAAGATACAGCGGAGGCCTTTTTCCTCGATGGTATGAGCAAGGCA ATCGCCAACATGGCCAGGCTATCGTCCGATCGTTTCCCAGCAACGATCTATTATGCGTTCAAGCAGAGCGAGGTCGCGCA GGAAGGGATTAGTTCGACTGGTTGGGCCACCTTTCTGCAGGCGGTAGTCGAGGCAGGCTACGCGGTCGTCGGCACATGGC CGCTGCGTACGGAAATGGCAAACCGCATGATTGCCTCAGGCACCAACGCGCTGGCCAATTCGGTCGTCCTCGTCTGCCGT AAGAAGGAAGCTACAGCCGAGGTTATCACCCGGGCCGAGTTCATTCGCGCCCTAAAACGCGAATTACCACCAGCGATTGC CGAACTTCAAGTTGCCAACATCGCGCCTGCCGACATGCCTCAATCGGCTATTGGTCCGGGCATGGGCGTCTTCTCGCGCT ACAAAGCCGTTCTCGAATCCGACGATAGCCCGATGAGCGTGAAGACTGCGCTCCAGCTCATCAATCGGGAACTCGACGAA TATCTCGGCGGCATCCAGGGCGAGTTCGACGCCGACACGCGGTTCGCCATCACCTGGTTCGAGCAGAACGGGAACGGCAA AGGGGATTACGGTGTCGCCGACAACCTCGCCCGCGCGCGCGGCATTGAACCGCCCCGAGTTTTCTAG
Upstream 100 bases:
>100_bases TTTACGGCAGTGTTTTTTCGGATGGTTCTTTGCTGGGCGAGCTGAGGCTGCGGCGTCCAGACGAACCGTTCCCGGATTTC GAATGGACTGAGGTGGAACT
Downstream 100 bases:
>100_bases ACGCCTTCGGGGGTCGCTTTGTGCTGCCGTTCGAACTCGATGGGCGACAGCATCCCGTTGCGTGCGTGTTTGCGGGTGGG GTTGTAGAACATCTCGATGT
Product: hypothetical protein
Products: NA
Alternate protein names: DNA Methylase Containing A Zn-Ribbon Module; DNA Methylase; Cytoplasmic Protein; Low Quality Protein; Adenine-Specific DNA Methylase Containing A Zn-Ribbon
Number of amino acids: Translated: 848; Mature: 847
Protein sequence:
>848_residues MTAYKKKLIEVALPLEAINAASAREKSIRHGHPSTLHLWWARRPLAACRAVLFAQLVDDPSSRVDELLADSKLRAHAEAE LPERLAAWENSKASAQGAAANAPEPTLEDVAVEIERRRLFEIIEELVKWENSTNEEVLERARAEIRKSCGGELPAVYDPF SGGGSIPLEAQRLGLPAYGSDLNPVAVMIGKATIEIPPKFKDKEPIHPDVKGRQFYRNAEGLAEDVKYYGEWMREKAWDR IGHLYPQVELPKEIGGGQTMVIAWIWARTVPSPDPAFADVQVPIASSFLLSRKAGKEAWVEPIIDKQAKTIAYRIRYGGT KAEMATAKDGTKAGRGANFRCIISDTAITPKHITSAAKSGKMGQVLIAIVGEGKGGRAYVSPSAEHETVAFSAGPSWKPE QRQPKNPRWFSPPAYGMDTFGDLFTDRQLVALNTFSDLVHEVRTQIEADAQRAGLSSDPTALRDGGKGAKAYAEAVSVYL AFGLSKATDYHSSITTWHNGREIIRNTFGRQALPMTWDFTEANPFSSSTGNWLNCIEWGVKTLAALVTAAGGTERQHDAQ TVDYPPETVISTDPPYYDNIGYADLSDFFFCWLKPVIRSVYPEIFGSIATPKSEELVATPYRHGGKDTAEAFFLDGMSKA IANMARLSSDRFPATIYYAFKQSEVAQEGISSTGWATFLQAVVEAGYAVVGTWPLRTEMANRMIASGTNALANSVVLVCR KKEATAEVITRAEFIRALKRELPPAIAELQVANIAPADMPQSAIGPGMGVFSRYKAVLESDDSPMSVKTALQLINRELDE YLGGIQGEFDADTRFAITWFEQNGNGKGDYGVADNLARARGIEPPRVF
Sequences:
>Translated_848_residues MTAYKKKLIEVALPLEAINAASAREKSIRHGHPSTLHLWWARRPLAACRAVLFAQLVDDPSSRVDELLADSKLRAHAEAE LPERLAAWENSKASAQGAAANAPEPTLEDVAVEIERRRLFEIIEELVKWENSTNEEVLERARAEIRKSCGGELPAVYDPF SGGGSIPLEAQRLGLPAYGSDLNPVAVMIGKATIEIPPKFKDKEPIHPDVKGRQFYRNAEGLAEDVKYYGEWMREKAWDR IGHLYPQVELPKEIGGGQTMVIAWIWARTVPSPDPAFADVQVPIASSFLLSRKAGKEAWVEPIIDKQAKTIAYRIRYGGT KAEMATAKDGTKAGRGANFRCIISDTAITPKHITSAAKSGKMGQVLIAIVGEGKGGRAYVSPSAEHETVAFSAGPSWKPE QRQPKNPRWFSPPAYGMDTFGDLFTDRQLVALNTFSDLVHEVRTQIEADAQRAGLSSDPTALRDGGKGAKAYAEAVSVYL AFGLSKATDYHSSITTWHNGREIIRNTFGRQALPMTWDFTEANPFSSSTGNWLNCIEWGVKTLAALVTAAGGTERQHDAQ TVDYPPETVISTDPPYYDNIGYADLSDFFFCWLKPVIRSVYPEIFGSIATPKSEELVATPYRHGGKDTAEAFFLDGMSKA IANMARLSSDRFPATIYYAFKQSEVAQEGISSTGWATFLQAVVEAGYAVVGTWPLRTEMANRMIASGTNALANSVVLVCR KKEATAEVITRAEFIRALKRELPPAIAELQVANIAPADMPQSAIGPGMGVFSRYKAVLESDDSPMSVKTALQLINRELDE YLGGIQGEFDADTRFAITWFEQNGNGKGDYGVADNLARARGIEPPRVF >Mature_847_residues TAYKKKLIEVALPLEAINAASAREKSIRHGHPSTLHLWWARRPLAACRAVLFAQLVDDPSSRVDELLADSKLRAHAEAEL PERLAAWENSKASAQGAAANAPEPTLEDVAVEIERRRLFEIIEELVKWENSTNEEVLERARAEIRKSCGGELPAVYDPFS GGGSIPLEAQRLGLPAYGSDLNPVAVMIGKATIEIPPKFKDKEPIHPDVKGRQFYRNAEGLAEDVKYYGEWMREKAWDRI GHLYPQVELPKEIGGGQTMVIAWIWARTVPSPDPAFADVQVPIASSFLLSRKAGKEAWVEPIIDKQAKTIAYRIRYGGTK AEMATAKDGTKAGRGANFRCIISDTAITPKHITSAAKSGKMGQVLIAIVGEGKGGRAYVSPSAEHETVAFSAGPSWKPEQ RQPKNPRWFSPPAYGMDTFGDLFTDRQLVALNTFSDLVHEVRTQIEADAQRAGLSSDPTALRDGGKGAKAYAEAVSVYLA FGLSKATDYHSSITTWHNGREIIRNTFGRQALPMTWDFTEANPFSSSTGNWLNCIEWGVKTLAALVTAAGGTERQHDAQT VDYPPETVISTDPPYYDNIGYADLSDFFFCWLKPVIRSVYPEIFGSIATPKSEELVATPYRHGGKDTAEAFFLDGMSKAI ANMARLSSDRFPATIYYAFKQSEVAQEGISSTGWATFLQAVVEAGYAVVGTWPLRTEMANRMIASGTNALANSVVLVCRK KEATAEVITRAEFIRALKRELPPAIAELQVANIAPADMPQSAIGPGMGVFSRYKAVLESDDSPMSVKTALQLINRELDEY LGGIQGEFDADTRFAITWFEQNGNGKGDYGVADNLARARGIEPPRVF
Specific function: Unknown
COG id: COG1743
COG function: function code L; Adenine-specific DNA methylase containing a Zn-ribbon
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 92929; Mature: 92798
Theoretical pI: Translated: 6.12; Mature: 6.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAYKKKLIEVALPLEAINAASAREKSIRHGHPSTLHLWWARRPLAACRAVLFAQLVDDP CCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHCCH SSRVDELLADSKLRAHAEAELPERLAAWENSKASAQGAAANAPEPTLEDVAVEIERRRLF HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH EIIEELVKWENSTNEEVLERARAEIRKSCGGELPAVYDPFSGGGSIPLEAQRLGLPAYGS HHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCC DLNPVAVMIGKATIEIPPKFKDKEPIHPDVKGRQFYRNAEGLAEDVKYYGEWMREKAWDR CCCCEEEEEECEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH IGHLYPQVELPKEIGGGQTMVIAWIWARTVPSPDPAFADVQVPIASSFLLSRKAGKEAWV HHHHCCCCCCHHHCCCCCEEEEEEEEHHCCCCCCCCCCEEECCHHHHHHHHHHCCHHHHH EPIIDKQAKTIAYRIRYGGTKAEMATAKDGTKAGRGANFRCIISDTAITPKHITSAAKSG HHHHHHHHHEEEEEEEECCCHHHHHCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHCC KMGQVLIAIVGEGKGGRAYVSPSAEHETVAFSAGPSWKPEQRQPKNPRWFSPPAYGMDTF CCCEEEEEEEECCCCCEEEECCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHH GDLFTDRQLVALNTFSDLVHEVRTQIEADAQRAGLSSDPTALRDGGKGAKAYAEAVSVYL HHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCHHHHHHHHHHHHH AFGLSKATDYHSSITTWHNGREIIRNTFGRQALPMTWDFTEANPFSSSTGNWLNCIEWGV HHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHH KTLAALVTAAGGTERQHDAQTVDYPPETVISTDPPYYDNIGYADLSDFFFCWLKPVIRSV HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH YPEIFGSIATPKSEELVATPYRHGGKDTAEAFFLDGMSKAIANMARLSSDRFPATIYYAF HHHHHHCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEH KQSEVAQEGISSTGWATFLQAVVEAGYAVVGTWPLRTEMANRMIASGTNALANSVVLVCR HHHHHHHHCCCCCHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHCCCHHHHHCEEEEEE KKEATAEVITRAEFIRALKRELPPAIAELQVANIAPADMPQSAIGPGMGVFSRYKAVLES CCHHHHHHHHHHHHHHHHHHHCCHHHHHEEHHCCCCCCCCHHHCCCCHHHHHHHHHHHCC DDSPMSVKTALQLINRELDEYLGGIQGEFDADTRFAITWFEQNGNGKGDYGVADNLARAR CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHC GIEPPRVF CCCCCCCC >Mature Secondary Structure TAYKKKLIEVALPLEAINAASAREKSIRHGHPSTLHLWWARRPLAACRAVLFAQLVDDP CHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHCCH SSRVDELLADSKLRAHAEAELPERLAAWENSKASAQGAAANAPEPTLEDVAVEIERRRLF HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH EIIEELVKWENSTNEEVLERARAEIRKSCGGELPAVYDPFSGGGSIPLEAQRLGLPAYGS HHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCC DLNPVAVMIGKATIEIPPKFKDKEPIHPDVKGRQFYRNAEGLAEDVKYYGEWMREKAWDR CCCCEEEEEECEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH IGHLYPQVELPKEIGGGQTMVIAWIWARTVPSPDPAFADVQVPIASSFLLSRKAGKEAWV HHHHCCCCCCHHHCCCCCEEEEEEEEHHCCCCCCCCCCEEECCHHHHHHHHHHCCHHHHH EPIIDKQAKTIAYRIRYGGTKAEMATAKDGTKAGRGANFRCIISDTAITPKHITSAAKSG HHHHHHHHHEEEEEEEECCCHHHHHCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHCC KMGQVLIAIVGEGKGGRAYVSPSAEHETVAFSAGPSWKPEQRQPKNPRWFSPPAYGMDTF CCCEEEEEEEECCCCCEEEECCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHH GDLFTDRQLVALNTFSDLVHEVRTQIEADAQRAGLSSDPTALRDGGKGAKAYAEAVSVYL HHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCHHHHHHHHHHHHH AFGLSKATDYHSSITTWHNGREIIRNTFGRQALPMTWDFTEANPFSSSTGNWLNCIEWGV HHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHH KTLAALVTAAGGTERQHDAQTVDYPPETVISTDPPYYDNIGYADLSDFFFCWLKPVIRSV HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH YPEIFGSIATPKSEELVATPYRHGGKDTAEAFFLDGMSKAIANMARLSSDRFPATIYYAF HHHHHHCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEH KQSEVAQEGISSTGWATFLQAVVEAGYAVVGTWPLRTEMANRMIASGTNALANSVVLVCR HHHHHHHHCCCCCHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHCCCHHHHHCEEEEEE KKEATAEVITRAEFIRALKRELPPAIAELQVANIAPADMPQSAIGPGMGVFSRYKAVLES CCHHHHHHHHHHHHHHHHHHHCCHHHHHEEHHCCCCCCCCHHHCCCCHHHHHHHHHHHCC DDSPMSVKTALQLINRELDEYLGGIQGEFDADTRFAITWFEQNGNGKGDYGVADNLARAR CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHC GIEPPRVF CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA