Definition Xanthobacter autotrophicus Py2 chromosome, complete genome.
Accession NC_009720
Length 5,308,934

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The map label for this gene is rapA [H]

Identifier: 154244631

GI number: 154244631

Start: 765582

End: 769085

Strand: Direct

Name: rapA [H]

Synonym: Xaut_0680

Alternate gene names: 154244631

Gene position: 765582-769085 (Clockwise)

Preceding gene: 154244630

Following gene: 154244632

Centisome position: 14.42

GC content: 61.33

Gene sequence:

>3504_bases
ATGGGGGCGAGACTCGAAGATATCAAAAACGGCGCGTCAGTCCGCGGCATTGCGTCCGCGCAGCCGGTTCAGGTTGTGTC
CGTCGACTGGATCGGCGACCAAGCCATTAGCGTCGTCTTCCGCGATCACAGTGGAACCGTTGCCGAATCCATTCTCTATC
GAGACGACGAACACCGGCTCGAAGTCGAGAAAACGGGCCGCCCCTGGTCTTTCGATGCCGACGGCGCATTGCTGCGGCTG
GTCACGGAAGCCAACCGGATCAAGCTTGCACATTATTTCGACCCCTATCTCGCGATCCATACCAGCCTAGTCGATCCGCT
GCCGCATCAGATTTCGGCCGTCTATGGCGAGATGCTGCCCCGTCAGCCGCTGCGCTTCCTCCTCGCCGACGATCCCGGCG
CGGGCAAGACGATCATGGCTGGCCTTCTCATCAAGGAACTGATCGCGCGCAGCGATCTCGAACGGTGCCTCGTCGTAGCG
CCAGGCAGCCTTGTCGAGCAGTGGCAGGACGAGCTTGGCCAGAAGTTCAATCTGGAATTCGACATCCTGACACGCGACAT
GATCGAGACGTCGCGTTCCGGCAATCCGTTCTCAGACCGCAATCGGCTGATCGTGCGGCTCGACGTCCTGGCGCGTAATG
AAGAGCTTCAGGACAAGCTCATGAGCGCGCAGGAATGGGACCTGATCATCTGCGACGAAGCGCATCGCATGTCGGCCACC
TATTTCGGCGGTGAAGTGAAATACACCAAGCGCTACCAGATCGGCCAGAAGCTCGGCCAGGCCTGCCGCCACCTGCTGCT
GATGTCGGCGACACCGCACAACGGCAAGGAAGAAGACTTCCAGCTCTTCATGGCTCTGCTTGACGGTGACCGTTTCGAGG
GCCGGTTCCGCGATGGCGTCCATTATGCCGATACAGAAGACATGATGCGGCGGCTGACCAAGGAGGAACTGCTTACATTC
GATGGCCGACCGCTGTTTCCCGAGCGTCGGGCCTACACTGTCAAGTATGAGCTCTCCGAGGGTGAGGCCGCGCTTTATAC
GGCGGTGACTGAGTACGTGCGGACAGAGATGAACCGCGTGCAGCGTTTTGCCGAGGGCGACGGCAAGAAGCGGAACAATG
TTGGCTTCGCCTTGCAGATCCTCCAGCGCCGCCTGGCGTCTTCGCCGGCCGCAATCTACCAGTCGCTGAAGCGCCGCCGC
GAGCGTCTGGAAAGCGAGCTCGGCGAGGCGCGCCTTGCTACGAAGGGTCGCCGGGCAGGTTTCGACGAGCGGGCGGTCAA
TGCAGACATCCTGCGCAACATCGAGGAATATGGGCAAGAGGAAATCGACGAGCTCGAGGACCTGATCTCCACCGGTGCGA
CGACCGCCGAGACTGTGGAGCAGCTCGTTCTTGAGGTCGAGACGCTGAAAAGCCTCGAAGCCATGGCGCTTGGCGTGCTG
CGTTCCGGCGTGGACACGAAATGGAGCCAGCTCAACCGCATCCTCGACGATGATTTGATGATCGACTCGGCCAAGAACCG
CAGAAAGCTGATCATCTTCACCGAACCGAAGGATACCCTGAACTACCTGCTCGAAAAGGTGCGCGCGCGTCTTGGCAACC
CCGAAGCGGTCGATGTGATCCACGGCGGCGTATCACGCGAGGAACGCCGCAAGGTGGTCGAACGCTTCATGCAGGACAAG
GACCTGCTCGTGCTGATCGCGAACGATGCCGCCGGCGAAGGCGTCAACCTCCAACGCGGGCATCTGATGGTCAATTACGA
CCTGCCTTGGAATCCCAACAAGATCGAACAACGCTTCGGCCGCATCCATCGCATCGGCCAGACGGAGGTTTGCCACCTCT
GGAACCTAGTCGCGGCCGACACGCGCGAGGGCGAAGTCTATGCCCGCCTCCTCGAAAAGCTGGAGGCTGCGCGCGAGGCC
CTGGGTGGGCGCGTCTATGACGTGCTTGGCGAATTGTTCGAGGGCACCGCACTCAAGGACCTTCTGTTCCAGGCGATTCA
GTATGGCGAGCAGGACGAGGTGAAGGCTCGCCTTCTGCAACAGGTCGATGGCGCGGTCGACCAGACGCACCTGCTTGAGC
TGCTTCGACGCCGGGCTCTGACTAACGATACCATGCCCGAAGCCAAGGTCGAGGAACTGCGGCTTGAGATGGAACGGGCT
GAAGCACTGCGCCTTCAGCCGCATCACATCCAGAGCTTCTTCGTTGAGGCATTCCAGCATCTCGGCGGTCGTCTCAAACG
ACGTGAGGAAGGTCGATGGGAAGTGACTCATGTGCCGGTGCGCATCCGCGAACGCGATCGGCAGATCGGCACCGGCGCGC
CGATTCAAAAGCAGTATGAGCGGATCTGCTTCGAAAAGGGCCTGATCAACCAGCAGCCGGTAGCGGCCTTCATCTGTCCT
GGGCACCCGCTGCTAGAAGCGGTGATTAGCCTGATCCGCGAGCAGTATGAACAGATCATGCGGCAGGGCGCGATCCTGGT
CGATGATACTGACCCGGGCGATAGCCTCTCAGCGATCTTCCTTCTGGAACACACGGTGCAGGATGGACGGATGACGAGCG
GCGGCAAACCGCATGTGATCTCGCAACGCCTCCAGTTCACCGCGATCGACAAGGCGGGTGATGCGGTCAACGCTGGTATC
GCGCCGCATCTCAACCTTCGCCCCGCAACTACCGAAGAGATCGACGCCGTCGGTAACCTGCTGGATGAGGATTGGCTGAC
GAGTGAGCTGGAGAAGACAGCCATCCGCTTCGCCACCGTGGAGCTGGCACAGGGGCATGTCGCGGAGATCAAGACCCGCC
GCCTTCCGGAGATCGACAAGGTCGAACAGGAGGTTCGCGCCCGGCTCAAGAAGGAAATCAATTACTGGGATTCCCGGGCC
TTCGAGCTGAAAGAGGAAGAGAAGGCCGGCAAGAAGGCACGGCTGAGCTGGCAAAATGCGCAGCGACGCGCCGAAGAACT
GGCCGAGCGCCAGAAGCGCCGAATGGACCAACTGGAGCGGGAGCGATTCATCACTTCGCAGCCACCCCGCGTGCGTGGCG
GCATGGTCGTGATTCCGGGCGGCCTTCTGGATGCGCGTCAGTCTCCGGCCGTACCGAAGCACTTCGCCGAAGATTCGGCG
GCGCGGCGCGCGATCGAACTCGCCGCGATGGAAGCGGTCATGGCGGCGGAACGCGCGCTGGGAAATGTGCCCGCCGATGT
GTCCGCACAGAAAATCGGTTACGACATCGCCTCACATGACCCGAAGTCGGGGCACCTGCGCTTCATCGAGGTCAAGGGAC
GTATCGACGGCGCTGACTCCGTGATGGTCACGCGGCAGGAAGTCATAACGTCGCTGCATGAGCCGGAGAAGTTCATCCTG
GCGATCGTCTCCGTCGAGGGCGGCTTCGCTCATGCCCCGCGCTATGTGCGCGGGCCGCTCGTCGAGCGGGAGCCGTCATT
CCTCGAAACGGCGATCCAGTTCGATTTGAAGCGGCTGTTGGAGCGGGCGGAGGAGGCACAATAA

Upstream 100 bases:

>100_bases
CGTACACAGCACATTGTTACAGTGAACCGGAAAGAAACCGAGGCAGCGCTGAAACAGGCGGAATATCAGCTATGACCGCA
TTTGGGGGACACGTCGGCTA

Downstream 100 bases:

>100_bases
TGGTGTTGCCGCTTGCCCATGTGACCCACTGGGGTGCCGCATCGAGACAGGTCATTCGCACGTTCAACGGGCGAAGCAAT
CTCCCAGTCCACGAATTGGC

Product: helicase domain-containing protein

Products: NA

Alternate protein names: ATP-dependent helicase hepA [H]

Number of amino acids: Translated: 1167; Mature: 1166

Protein sequence:

>1167_residues
MGARLEDIKNGASVRGIASAQPVQVVSVDWIGDQAISVVFRDHSGTVAESILYRDDEHRLEVEKTGRPWSFDADGALLRL
VTEANRIKLAHYFDPYLAIHTSLVDPLPHQISAVYGEMLPRQPLRFLLADDPGAGKTIMAGLLIKELIARSDLERCLVVA
PGSLVEQWQDELGQKFNLEFDILTRDMIETSRSGNPFSDRNRLIVRLDVLARNEELQDKLMSAQEWDLIICDEAHRMSAT
YFGGEVKYTKRYQIGQKLGQACRHLLLMSATPHNGKEEDFQLFMALLDGDRFEGRFRDGVHYADTEDMMRRLTKEELLTF
DGRPLFPERRAYTVKYELSEGEAALYTAVTEYVRTEMNRVQRFAEGDGKKRNNVGFALQILQRRLASSPAAIYQSLKRRR
ERLESELGEARLATKGRRAGFDERAVNADILRNIEEYGQEEIDELEDLISTGATTAETVEQLVLEVETLKSLEAMALGVL
RSGVDTKWSQLNRILDDDLMIDSAKNRRKLIIFTEPKDTLNYLLEKVRARLGNPEAVDVIHGGVSREERRKVVERFMQDK
DLLVLIANDAAGEGVNLQRGHLMVNYDLPWNPNKIEQRFGRIHRIGQTEVCHLWNLVAADTREGEVYARLLEKLEAAREA
LGGRVYDVLGELFEGTALKDLLFQAIQYGEQDEVKARLLQQVDGAVDQTHLLELLRRRALTNDTMPEAKVEELRLEMERA
EALRLQPHHIQSFFVEAFQHLGGRLKRREEGRWEVTHVPVRIRERDRQIGTGAPIQKQYERICFEKGLINQQPVAAFICP
GHPLLEAVISLIREQYEQIMRQGAILVDDTDPGDSLSAIFLLEHTVQDGRMTSGGKPHVISQRLQFTAIDKAGDAVNAGI
APHLNLRPATTEEIDAVGNLLDEDWLTSELEKTAIRFATVELAQGHVAEIKTRRLPEIDKVEQEVRARLKKEINYWDSRA
FELKEEEKAGKKARLSWQNAQRRAEELAERQKRRMDQLERERFITSQPPRVRGGMVVIPGGLLDARQSPAVPKHFAEDSA
ARRAIELAAMEAVMAAERALGNVPADVSAQKIGYDIASHDPKSGHLRFIEVKGRIDGADSVMVTRQEVITSLHEPEKFIL
AIVSVEGGFAHAPRYVRGPLVEREPSFLETAIQFDLKRLLERAEEAQ

Sequences:

>Translated_1167_residues
MGARLEDIKNGASVRGIASAQPVQVVSVDWIGDQAISVVFRDHSGTVAESILYRDDEHRLEVEKTGRPWSFDADGALLRL
VTEANRIKLAHYFDPYLAIHTSLVDPLPHQISAVYGEMLPRQPLRFLLADDPGAGKTIMAGLLIKELIARSDLERCLVVA
PGSLVEQWQDELGQKFNLEFDILTRDMIETSRSGNPFSDRNRLIVRLDVLARNEELQDKLMSAQEWDLIICDEAHRMSAT
YFGGEVKYTKRYQIGQKLGQACRHLLLMSATPHNGKEEDFQLFMALLDGDRFEGRFRDGVHYADTEDMMRRLTKEELLTF
DGRPLFPERRAYTVKYELSEGEAALYTAVTEYVRTEMNRVQRFAEGDGKKRNNVGFALQILQRRLASSPAAIYQSLKRRR
ERLESELGEARLATKGRRAGFDERAVNADILRNIEEYGQEEIDELEDLISTGATTAETVEQLVLEVETLKSLEAMALGVL
RSGVDTKWSQLNRILDDDLMIDSAKNRRKLIIFTEPKDTLNYLLEKVRARLGNPEAVDVIHGGVSREERRKVVERFMQDK
DLLVLIANDAAGEGVNLQRGHLMVNYDLPWNPNKIEQRFGRIHRIGQTEVCHLWNLVAADTREGEVYARLLEKLEAAREA
LGGRVYDVLGELFEGTALKDLLFQAIQYGEQDEVKARLLQQVDGAVDQTHLLELLRRRALTNDTMPEAKVEELRLEMERA
EALRLQPHHIQSFFVEAFQHLGGRLKRREEGRWEVTHVPVRIRERDRQIGTGAPIQKQYERICFEKGLINQQPVAAFICP
GHPLLEAVISLIREQYEQIMRQGAILVDDTDPGDSLSAIFLLEHTVQDGRMTSGGKPHVISQRLQFTAIDKAGDAVNAGI
APHLNLRPATTEEIDAVGNLLDEDWLTSELEKTAIRFATVELAQGHVAEIKTRRLPEIDKVEQEVRARLKKEINYWDSRA
FELKEEEKAGKKARLSWQNAQRRAEELAERQKRRMDQLERERFITSQPPRVRGGMVVIPGGLLDARQSPAVPKHFAEDSA
ARRAIELAAMEAVMAAERALGNVPADVSAQKIGYDIASHDPKSGHLRFIEVKGRIDGADSVMVTRQEVITSLHEPEKFIL
AIVSVEGGFAHAPRYVRGPLVEREPSFLETAIQFDLKRLLERAEEAQ
>Mature_1166_residues
GARLEDIKNGASVRGIASAQPVQVVSVDWIGDQAISVVFRDHSGTVAESILYRDDEHRLEVEKTGRPWSFDADGALLRLV
TEANRIKLAHYFDPYLAIHTSLVDPLPHQISAVYGEMLPRQPLRFLLADDPGAGKTIMAGLLIKELIARSDLERCLVVAP
GSLVEQWQDELGQKFNLEFDILTRDMIETSRSGNPFSDRNRLIVRLDVLARNEELQDKLMSAQEWDLIICDEAHRMSATY
FGGEVKYTKRYQIGQKLGQACRHLLLMSATPHNGKEEDFQLFMALLDGDRFEGRFRDGVHYADTEDMMRRLTKEELLTFD
GRPLFPERRAYTVKYELSEGEAALYTAVTEYVRTEMNRVQRFAEGDGKKRNNVGFALQILQRRLASSPAAIYQSLKRRRE
RLESELGEARLATKGRRAGFDERAVNADILRNIEEYGQEEIDELEDLISTGATTAETVEQLVLEVETLKSLEAMALGVLR
SGVDTKWSQLNRILDDDLMIDSAKNRRKLIIFTEPKDTLNYLLEKVRARLGNPEAVDVIHGGVSREERRKVVERFMQDKD
LLVLIANDAAGEGVNLQRGHLMVNYDLPWNPNKIEQRFGRIHRIGQTEVCHLWNLVAADTREGEVYARLLEKLEAAREAL
GGRVYDVLGELFEGTALKDLLFQAIQYGEQDEVKARLLQQVDGAVDQTHLLELLRRRALTNDTMPEAKVEELRLEMERAE
ALRLQPHHIQSFFVEAFQHLGGRLKRREEGRWEVTHVPVRIRERDRQIGTGAPIQKQYERICFEKGLINQQPVAAFICPG
HPLLEAVISLIREQYEQIMRQGAILVDDTDPGDSLSAIFLLEHTVQDGRMTSGGKPHVISQRLQFTAIDKAGDAVNAGIA
PHLNLRPATTEEIDAVGNLLDEDWLTSELEKTAIRFATVELAQGHVAEIKTRRLPEIDKVEQEVRARLKKEINYWDSRAF
ELKEEEKAGKKARLSWQNAQRRAEELAERQKRRMDQLERERFITSQPPRVRGGMVVIPGGLLDARQSPAVPKHFAEDSAA
RRAIELAAMEAVMAAERALGNVPADVSAQKIGYDIASHDPKSGHLRFIEVKGRIDGADSVMVTRQEVITSLHEPEKFILA
IVSVEGGFAHAPRYVRGPLVEREPSFLETAIQFDLKRLLERAEEAQ

Specific function: Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on

COG id: COG0553

COG function: function code KL; Superfamily II DNA/RNA helicases, SNF2 family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI216548193, Length=156, Percent_Identity=29.4871794871795, Blast_Score=72, Evalue=4e-12,
Organism=Homo sapiens, GI216548186, Length=156, Percent_Identity=29.4871794871795, Blast_Score=72, Evalue=4e-12,
Organism=Escherichia coli, GI1786245, Length=200, Percent_Identity=31, Blast_Score=95, Evalue=3e-20,
Organism=Drosophila melanogaster, GI28573600, Length=188, Percent_Identity=28.7234042553192, Blast_Score=69, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24656962, Length=188, Percent_Identity=28.7234042553192, Blast_Score=69, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24656966, Length=188, Percent_Identity=28.7234042553192, Blast_Score=69, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR001650
- InterPro:   IPR014021
- InterPro:   IPR022737
- InterPro:   IPR000330 [H]

Pfam domain/function: PF00271 Helicase_C; PF12137 RapA_C; PF00176 SNF2_N [H]

EC number: 3.6.1.- [C]

Molecular weight: Translated: 132303; Mature: 132172

Theoretical pI: Translated: 5.65; Mature: 5.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGARLEDIKNGASVRGIASAQPVQVVSVDWIGDQAISVVFRDHSGTVAESILYRDDEHRL
CCCCHHHHCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEEECCCCHHHHHHHHCCCCCCE
EVEKTGRPWSFDADGALLRLVTEANRIKLAHYFDPYLAIHTSLVDPLPHQISAVYGEMLP
EEECCCCCCCCCCCCHHHHHHHHCCCEEEEHHCCHHHHHHHHHHCCCHHHHHHHHHHHCC
RQPLRFLLADDPGAGKTIMAGLLIKELIARSDLERCLVVAPGSLVEQWQDELGQKFNLEF
CCCHHEEEECCCCCCHHHHHHHHHHHHHHHHCHHHEEEECCHHHHHHHHHHCCCEECCEE
DILTRDMIETSRSGNPFSDRNRLIVRLDVLARNEELQDKLMSAQEWDLIICDEAHRMSAT
HHHHHHHHHHCCCCCCCCCCCCEEEEEEEHHCCHHHHHHHCCCCCCCEEEECCCCCCEEE
YFGGEVKYTKRYQIGQKLGQACRHLLLMSATPHNGKEEDFQLFMALLDGDRFEGRFRDGV
EECCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCHHHCCC
HYADTEDMMRRLTKEELLTFDGRPLFPERRAYTVKYELSEGEAALYTAVTEYVRTEMNRV
CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHH
QRFAEGDGKKRNNVGFALQILQRRLASSPAAIYQSLKRRRERLESELGEARLATKGRRAG
HHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
FDERAVNADILRNIEEYGQEEIDELEDLISTGATTAETVEQLVLEVETLKSLEAMALGVL
CCHHHCCHHHHHHHHHHCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
RSGVDTKWSQLNRILDDDLMIDSAKNRRKLIIFTEPKDTLNYLLEKVRARLGNPEAVDVI
HCCCCHHHHHHHHHHHHHHEECCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCEEHHH
HGGVSREERRKVVERFMQDKDLLVLIANDAAGEGVNLQRGHLMVNYDLPWNPNKIEQRFG
HCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCEECCEEEEEECCCCCCCHHHHHHH
RIHRIGQTEVCHLWNLVAADTREGEVYARLLEKLEAAREALGGRVYDVLGELFEGTALKD
HHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHH
LLFQAIQYGEQDEVKARLLQQVDGAVDQTHLLELLRRRALTNDTMPEAKVEELRLEMERA
HHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
EALRLQPHHIQSFFVEAFQHLGGRLKRREEGRWEVTHVPVRIRERDRQIGTGAPIQKQYE
HHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCEEEHHHCCCCCCCCCHHHHHH
RICFEKGLINQQPVAAFICPGHPLLEAVISLIREQYEQIMRQGAILVDDTDPGDSLSAIF
HHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHH
LLEHTVQDGRMTSGGKPHVISQRLQFTAIDKAGDAVNAGIAPHLNLRPATTEEIDAVGNL
HHHHHHCCCCCCCCCCCCHHHHHHHEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
LDEDWLTSELEKTAIRFATVELAQGHVAEIKTRRLPEIDKVEQEVRARLKKEINYWDSRA
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHH
FELKEEEKAGKKARLSWQNAQRRAEELAERQKRRMDQLERERFITSQPPRVRGGMVVIPG
HCCCHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECC
GLLDARQSPAVPKHFAEDSAARRAIELAAMEAVMAAERALGNVPADVSAQKIGYDIASHD
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCHHHCCC
PKSGHLRFIEVKGRIDGADSVMVTRQEVITSLHEPEKFILAIVSVEGGFAHAPRYVRGPL
CCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCHHHCCCC
VEREPSFLETAIQFDLKRLLERAEEAQ
CCCCHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GARLEDIKNGASVRGIASAQPVQVVSVDWIGDQAISVVFRDHSGTVAESILYRDDEHRL
CCCHHHHCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEEECCCCHHHHHHHHCCCCCCE
EVEKTGRPWSFDADGALLRLVTEANRIKLAHYFDPYLAIHTSLVDPLPHQISAVYGEMLP
EEECCCCCCCCCCCCHHHHHHHHCCCEEEEHHCCHHHHHHHHHHCCCHHHHHHHHHHHCC
RQPLRFLLADDPGAGKTIMAGLLIKELIARSDLERCLVVAPGSLVEQWQDELGQKFNLEF
CCCHHEEEECCCCCCHHHHHHHHHHHHHHHHCHHHEEEECCHHHHHHHHHHCCCEECCEE
DILTRDMIETSRSGNPFSDRNRLIVRLDVLARNEELQDKLMSAQEWDLIICDEAHRMSAT
HHHHHHHHHHCCCCCCCCCCCCEEEEEEEHHCCHHHHHHHCCCCCCCEEEECCCCCCEEE
YFGGEVKYTKRYQIGQKLGQACRHLLLMSATPHNGKEEDFQLFMALLDGDRFEGRFRDGV
EECCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCHHHCCC
HYADTEDMMRRLTKEELLTFDGRPLFPERRAYTVKYELSEGEAALYTAVTEYVRTEMNRV
CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHH
QRFAEGDGKKRNNVGFALQILQRRLASSPAAIYQSLKRRRERLESELGEARLATKGRRAG
HHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
FDERAVNADILRNIEEYGQEEIDELEDLISTGATTAETVEQLVLEVETLKSLEAMALGVL
CCHHHCCHHHHHHHHHHCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
RSGVDTKWSQLNRILDDDLMIDSAKNRRKLIIFTEPKDTLNYLLEKVRARLGNPEAVDVI
HCCCCHHHHHHHHHHHHHHEECCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCEEHHH
HGGVSREERRKVVERFMQDKDLLVLIANDAAGEGVNLQRGHLMVNYDLPWNPNKIEQRFG
HCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCEECCEEEEEECCCCCCCHHHHHHH
RIHRIGQTEVCHLWNLVAADTREGEVYARLLEKLEAAREALGGRVYDVLGELFEGTALKD
HHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHH
LLFQAIQYGEQDEVKARLLQQVDGAVDQTHLLELLRRRALTNDTMPEAKVEELRLEMERA
HHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
EALRLQPHHIQSFFVEAFQHLGGRLKRREEGRWEVTHVPVRIRERDRQIGTGAPIQKQYE
HHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCEEEHHHCCCCCCCCCHHHHHH
RICFEKGLINQQPVAAFICPGHPLLEAVISLIREQYEQIMRQGAILVDDTDPGDSLSAIF
HHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHH
LLEHTVQDGRMTSGGKPHVISQRLQFTAIDKAGDAVNAGIAPHLNLRPATTEEIDAVGNL
HHHHHHCCCCCCCCCCCCHHHHHHHEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
LDEDWLTSELEKTAIRFATVELAQGHVAEIKTRRLPEIDKVEQEVRARLKKEINYWDSRA
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHH
FELKEEEKAGKKARLSWQNAQRRAEELAERQKRRMDQLERERFITSQPPRVRGGMVVIPG
HCCCHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECC
GLLDARQSPAVPKHFAEDSAARRAIELAAMEAVMAAERALGNVPADVSAQKIGYDIASHD
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCHHHCCC
PKSGHLRFIEVKGRIDGADSVMVTRQEVITSLHEPEKFILAIVSVEGGFAHAPRYVRGPL
CCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCHHHCCCC
VEREPSFLETAIQFDLKRLLERAEEAQ
CCCCHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA