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The map label for this gene is slyA [C]

Identifier: 154244603

GI number: 154244603

Start: 732950

End: 733468

Strand: Direct

Name: slyA [C]

Synonym: Xaut_0651

Alternate gene names: 154244603

Gene position: 732950-733468 (Clockwise)

Preceding gene: 154244585

Following gene: 154244605

Centisome position: 13.81

GC content: 65.9

Gene sequence:

>519_bases
GTGGCTGTGACGAAATCTCAAGCAAACTCAGATGCCTACAAAGCGGGGCCGCAGAGCCACTCGGACGGGGGGTGGCCGCT
GTCGGACCGGCCCGGCTTCCTCGCCCGGCGGGTGCACCAGATCCATGTCAGCCTGTTTTCTGAGCTGTGTGCCCCATTCG
GTGTGACGCCGGTGCAGTACAGCCTTTTGTCCGCTTTGGCGGGGCGGGAAGCGGCGGACCAGACCACCCTCTCGCGCATC
GTCGCGCTGGATCGCACCACCACCACCGGCGCCCTCAAACGCCTTGAGGCGCGTGGCCTGGTGCGCCGCGGAACCTCGGC
CACCGACCGCCGCTCCCAGAGCTGCGCGCTGACCCCGGAGGGGCGGCGCCTGCTGGAGGAGATGGAAGCCCTGGCCCGAA
AGGCTCATGCCGCCACCGTCGACATGCTCAGCCCAGAGGAGCGGACTCAATTCATTGAGATCATGAAGAAAATCGTTTCA
GCGCACGGCGGGCGGCAGACGTCTTTCGATCTGCTCTAA

Upstream 100 bases:

>100_bases
TTGAAAAAGCGAAGTATGCTTCGTATTTTGGTTATGCATGCCGTATGCCAGAGTTTGATCTGGATCAAAAATGCGACCGG
CAGGGGTGCCTGAGGGGAAT

Downstream 100 bases:

>100_bases
TTTTGGGCATGCCCCTGTCCATGGAACAGGCGCCCAAAGGGTGGGCAGTCGCTGGCCGGCCCGCGCTCGGGGCCTCAGAA
GGCCGGCAGGCCGTCAAAGA

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator MarR Family; Transcriptional Regulator; MarR-Family Transcriptional Regulator; Transcriptional Regulatory Protein; Regulatory Protein MarR; MarR Family Transcription Regulator Protein; Transcription Regulator MarR Family; Transcriptional Regulator MarR; Transcriptional Regulator Protein; Transcriptional Regulator MarR Family Protein; Regulatory Protein Marr; MarR Family Regulatory Helix-Turn-Helix

Number of amino acids: Translated: 172; Mature: 171

Protein sequence:

>172_residues
MAVTKSQANSDAYKAGPQSHSDGGWPLSDRPGFLARRVHQIHVSLFSELCAPFGVTPVQYSLLSALAGREAADQTTLSRI
VALDRTTTTGALKRLEARGLVRRGTSATDRRSQSCALTPEGRRLLEEMEALARKAHAATVDMLSPEERTQFIEIMKKIVS
AHGGRQTSFDLL

Sequences:

>Translated_172_residues
MAVTKSQANSDAYKAGPQSHSDGGWPLSDRPGFLARRVHQIHVSLFSELCAPFGVTPVQYSLLSALAGREAADQTTLSRI
VALDRTTTTGALKRLEARGLVRRGTSATDRRSQSCALTPEGRRLLEEMEALARKAHAATVDMLSPEERTQFIEIMKKIVS
AHGGRQTSFDLL
>Mature_171_residues
AVTKSQANSDAYKAGPQSHSDGGWPLSDRPGFLARRVHQIHVSLFSELCAPFGVTPVQYSLLSALAGREAADQTTLSRIV
ALDRTTTTGALKRLEARGLVRRGTSATDRRSQSCALTPEGRRLLEEMEALARKAHAATVDMLSPEERTQFIEIMKKIVSA
HGGRQTSFDLL

Specific function: Transcription Factor That Activates Expression Of Genes Such As Molecular Chaperones (Grol, Gros, Dnak, Grpe, And Cbpa), Proteins Involved In Acid Resistance (Hdea, Hdeb, And Gada), The Starvation Lipoprotein Slp, Virulence Protein Hlye/Clya. Represses Ex

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18733; Mature: 18601

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVTKSQANSDAYKAGPQSHSDGGWPLSDRPGFLARRVHQIHVSLFSELCAPFGVTPVQY
CCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHH
SLLSALAGREAADQTTLSRIVALDRTTTTGALKRLEARGLVRRGTSATDRRSQSCALTPE
HHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCHH
GRRLLEEMEALARKAHAATVDMLSPEERTQFIEIMKKIVSAHGGRQTSFDLL
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
AVTKSQANSDAYKAGPQSHSDGGWPLSDRPGFLARRVHQIHVSLFSELCAPFGVTPVQY
CCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHH
SLLSALAGREAADQTTLSRIVALDRTTTTGALKRLEARGLVRRGTSATDRRSQSCALTPE
HHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCHH
GRRLLEEMEALARKAHAATVDMLSPEERTQFIEIMKKIVSAHGGRQTSFDLL
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA