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The map label for this gene is yubM [H]

Identifier: 154244526

GI number: 154244526

Start: 644042

End: 646105

Strand: Direct

Name: yubM [H]

Synonym: Xaut_0571

Alternate gene names: 154244526

Gene position: 644042-646105 (Clockwise)

Preceding gene: 154244525

Following gene: 154244527

Centisome position: 12.13

GC content: 67.68

Gene sequence:

>2064_bases
ATGGCCACGTCCGTTCAGAAGATCACCCTTTCGTCCTCGCGGGACATCCCCTTCAACAAGCTGGTGCTCAGCCAGTCCAA
CGTCCGCCGGGTGAAGGCCGGCGTCTCCATCGAGGAACTCGCCGAGGACATCGCCCGGCGCGGCCTGCTCCAGGGCCTCA
ATGTCCGCACCGTGATCGATGCTGATGGCGTCGAGACCGGCATGTACGAGATCCCGGCCGGCGGCCGGCGCTACCGGGCG
CTGGAGTTGCTGGTGAAGCGCAAGCGCCTCGCCCGGACGGCTCCCGTGCCCTGCATCCTGCGCGAAGGCGGCATTGCCGA
GGAGGATTCCCTTGCCGAGAATGTCCAGCGCGCACCGCTGCACCCGCTCGACCAGTTCAGGGCGTTCCTTGCGTTGCGGG
AGAAGGGCCAGTCCGAGGAGGAGATCGCGGCCGCCTTCTTCGTCTCGGTCGCAGTGGTGAAGCAGCGGTTGAAGCTCGCC
TCCGTCTCGCCGAAGCTGCTCGACGTCTATGCCGAGGATGGCCTCACCCTCGACCAGCTCATGGCCTTCACCGTGTCGGG
TGATCATGAGCGGCAGGAGCAGGTGCTGGAGCGTCTCGCCCAGGCTTACGACAAGCAACCCCATGCGATCCGGCGCATGA
TGACGGAGGGTGCGGTGCGGGCATCCGACAAGCGGGCCCGCTTCATCGGCATCGGGGCCTATGAGACGGCTGGCGGCACC
GTGCTGCGCGACCTGTTCCAGGGGGACGACGGCGGCTGGCTGCAGGATGTCACCCTCGTCGATCGCATGGTGGCGGCAAA
GCTCGCCATTGAGGCCGACGGGATCCGCGGCGAAGGCTGGAAGTGGATCGAGGTGGCGCCGGACTTTGCCTATGGCCACA
CCTACGGCCTGCGCCAGCTGCGGGGTGAGCCGACGCCCCTGACCGAGGAGGAGGAGGCAGCTCGGGCGAGGGCCCAGGCC
GCATATGATCGCCTCTCCGAAGAATATGCCGATGCCGACGAGCTTCCCGAGGAGGTCGATGCGCGGCTCGGTGAGCTCGA
GGCGGTGCTGGAGGCCTTTGAGACGCGCCCCCTCGCGTTCGATCCGGCGGAGGTCGGCCGCGCCGGCGCCTTCGTCAGCA
TCGCCCAGGACGGCAAGCTCCGGGTGGAGCGGGGATATGTCTGCCCGGAGGACGAGGTGCCGGTCGTGCAGGACGATGAA
GCTCCCGCCGGGACCGATGGAGAAGACCATGCGGCCTCGGCCCCTCGTCAGGAAGCAGCCGTAGGTGATGCACCTGCGGA
GCCCGAGGAAGAAGACGGCCTCGCGCCGATCTCCGATCGGCTACTTACGGAGCTGACCACCCATCGCACCCTCGGCCTGC
GCCATGCCCTGGGCGAGCAGCCCGATGTCGCCTTCCTCGCTGCGGTCCACGCTCTGACGCTGAAGGCCTTCTACGTCTAC
GGCTCGGACAGCTGCCTTGAGCTCGACCTCAAGAGCGTGTCCTTCAACGCCCAGGCGCCGGGCCTCAACGACAGCGTTTC
GGCCGAGGCCATTCGTGTCCGGCACGAAAACTGGGCCAAGGCTCTGCCCAAGGAGCCGGGCACGCTCTGGGACACCTTGA
GCGGGTGGGAGCGTGACAGCCAGGCCGCCTTGTTCGCCCATGTGGTGAGCCTCTCGGTCAATGCGGTGCATGAAGCATGG
AACCGCCGTCCCCGCGCCTTCGCCCATGCCGACCGGTTGGCGCAGGCGGTAGGGCTCGACATGGCGGCGGCGGGATGGAG
GCCCACTGTTGACACCTTCCTCGGCCGGGTCACCAAGGCCCGCATCCTGCAGGCGGTGACCGAGGCGAAGGGGGAACGTG
CAGCTGAGCGGATCGCCCACCTCAAGAAGGGCGACATGGCACGGGAGGCAGAAGCCCTCCTTGCCGACAGCGGCTGGCTC
CCGGAGGCGCTGCGGAACCAGCCCTCCGACACCGCCGGCGAAGAGACGGCGGAGACCGACGGCGAAACGGCCATGGGCGA
AGGGGAAGACCTCGCCGACACTGAGGAGCCCGAAGTGATCTCCTCCTCGATTGCTGCCGAATAA

Upstream 100 bases:

>100_bases
TGCGGCGCTGCCCTCAGAGGAAGAGGGTGGCGCCGTGCTTCGTGACGGGTTCGAGGTTGAGAGAGAGGTTCTCCGGCCGC
CCGTCGCGGAGAAGCATCCC

Downstream 100 bases:

>100_bases
TCCTCCCCGGGCAACCTGGCCCGCCGTCCGTGGCTCCGCGATCCCCCCATCGCGTGGCCGGACGGCGGGCTTTTCTCTTG
GAGCGTCCCTATGACGGATG

Product: parB-like partition protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 687; Mature: 686

Protein sequence:

>687_residues
MATSVQKITLSSSRDIPFNKLVLSQSNVRRVKAGVSIEELAEDIARRGLLQGLNVRTVIDADGVETGMYEIPAGGRRYRA
LELLVKRKRLARTAPVPCILREGGIAEEDSLAENVQRAPLHPLDQFRAFLALREKGQSEEEIAAAFFVSVAVVKQRLKLA
SVSPKLLDVYAEDGLTLDQLMAFTVSGDHERQEQVLERLAQAYDKQPHAIRRMMTEGAVRASDKRARFIGIGAYETAGGT
VLRDLFQGDDGGWLQDVTLVDRMVAAKLAIEADGIRGEGWKWIEVAPDFAYGHTYGLRQLRGEPTPLTEEEEAARARAQA
AYDRLSEEYADADELPEEVDARLGELEAVLEAFETRPLAFDPAEVGRAGAFVSIAQDGKLRVERGYVCPEDEVPVVQDDE
APAGTDGEDHAASAPRQEAAVGDAPAEPEEEDGLAPISDRLLTELTTHRTLGLRHALGEQPDVAFLAAVHALTLKAFYVY
GSDSCLELDLKSVSFNAQAPGLNDSVSAEAIRVRHENWAKALPKEPGTLWDTLSGWERDSQAALFAHVVSLSVNAVHEAW
NRRPRAFAHADRLAQAVGLDMAAAGWRPTVDTFLGRVTKARILQAVTEAKGERAAERIAHLKKGDMAREAEALLADSGWL
PEALRNQPSDTAGEETAETDGETAMGEGEDLADTEEPEVISSSIAAE

Sequences:

>Translated_687_residues
MATSVQKITLSSSRDIPFNKLVLSQSNVRRVKAGVSIEELAEDIARRGLLQGLNVRTVIDADGVETGMYEIPAGGRRYRA
LELLVKRKRLARTAPVPCILREGGIAEEDSLAENVQRAPLHPLDQFRAFLALREKGQSEEEIAAAFFVSVAVVKQRLKLA
SVSPKLLDVYAEDGLTLDQLMAFTVSGDHERQEQVLERLAQAYDKQPHAIRRMMTEGAVRASDKRARFIGIGAYETAGGT
VLRDLFQGDDGGWLQDVTLVDRMVAAKLAIEADGIRGEGWKWIEVAPDFAYGHTYGLRQLRGEPTPLTEEEEAARARAQA
AYDRLSEEYADADELPEEVDARLGELEAVLEAFETRPLAFDPAEVGRAGAFVSIAQDGKLRVERGYVCPEDEVPVVQDDE
APAGTDGEDHAASAPRQEAAVGDAPAEPEEEDGLAPISDRLLTELTTHRTLGLRHALGEQPDVAFLAAVHALTLKAFYVY
GSDSCLELDLKSVSFNAQAPGLNDSVSAEAIRVRHENWAKALPKEPGTLWDTLSGWERDSQAALFAHVVSLSVNAVHEAW
NRRPRAFAHADRLAQAVGLDMAAAGWRPTVDTFLGRVTKARILQAVTEAKGERAAERIAHLKKGDMAREAEALLADSGWL
PEALRNQPSDTAGEETAETDGETAMGEGEDLADTEEPEVISSSIAAE
>Mature_686_residues
ATSVQKITLSSSRDIPFNKLVLSQSNVRRVKAGVSIEELAEDIARRGLLQGLNVRTVIDADGVETGMYEIPAGGRRYRAL
ELLVKRKRLARTAPVPCILREGGIAEEDSLAENVQRAPLHPLDQFRAFLALREKGQSEEEIAAAFFVSVAVVKQRLKLAS
VSPKLLDVYAEDGLTLDQLMAFTVSGDHERQEQVLERLAQAYDKQPHAIRRMMTEGAVRASDKRARFIGIGAYETAGGTV
LRDLFQGDDGGWLQDVTLVDRMVAAKLAIEADGIRGEGWKWIEVAPDFAYGHTYGLRQLRGEPTPLTEEEEAARARAQAA
YDRLSEEYADADELPEEVDARLGELEAVLEAFETRPLAFDPAEVGRAGAFVSIAQDGKLRVERGYVCPEDEVPVVQDDEA
PAGTDGEDHAASAPRQEAAVGDAPAEPEEEDGLAPISDRLLTELTTHRTLGLRHALGEQPDVAFLAAVHALTLKAFYVYG
SDSCLELDLKSVSFNAQAPGLNDSVSAEAIRVRHENWAKALPKEPGTLWDTLSGWERDSQAALFAHVVSLSVNAVHEAWN
RRPRAFAHADRLAQAVGLDMAAAGWRPTVDTFLGRVTKARILQAVTEAKGERAAERIAHLKKGDMAREAEALLADSGWLP
EALRNQPSDTAGEETAETDGETAMGEGEDLADTEEPEVISSSIAAE

Specific function: Unknown

COG id: COG1475

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004437
- InterPro:   IPR003115 [H]

Pfam domain/function: PF02195 ParBc [H]

EC number: NA

Molecular weight: Translated: 74770; Mature: 74639

Theoretical pI: Translated: 4.50; Mature: 4.50

Prosite motif: PS00435 PEROXIDASE_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATSVQKITLSSSRDIPFNKLVLSQSNVRRVKAGVSIEELAEDIARRGLLQGLNVRTVID
CCCCCEEEEECCCCCCCHHHEEECCCHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEEEE
ADGVETGMYEIPAGGRRYRALELLVKRKRLARTAPVPCILREGGIAEEDSLAENVQRAPL
CCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHCCC
HPLDQFRAFLALREKGQSEEEIAAAFFVSVAVVKQRLKLASVSPKLLDVYAEDGLTLDQL
CHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHH
MAFTVSGDHERQEQVLERLAQAYDKQPHAIRRMMTEGAVRASDKRARFIGIGAYETAGGT
HHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCHH
VLRDLFQGDDGGWLQDVTLVDRMVAAKLAIEADGIRGEGWKWIEVAPDFAYGHTYGLRQL
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHEECCCCCCCEEEEEECCCCCCCCHHHHHHH
RGEPTPLTEEEEAARARAQAAYDRLSEEYADADELPEEVDARLGELEAVLEAFETRPLAF
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHHHHHHHHCCCCCC
DPAEVGRAGAFVSIAQDGKLRVERGYVCPEDEVPVVQDDEAPAGTDGEDHAASAPRQEAA
CHHHHCCCCCEEEEECCCCEEEECCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCHHHHC
VGDAPAEPEEEDGLAPISDRLLTELTTHRTLGLRHALGEQPDVAFLAAVHALTLKAFYVY
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHEEEEE
GSDSCLELDLKSVSFNAQAPGLNDSVSAEAIRVRHENWAKALPKEPGTLWDTLSGWERDS
CCCCEEEEEEHHEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCC
QAALFAHVVSLSVNAVHEAWNRRPRAFAHADRLAQAVGLDMAAAGWRPTVDTFLGRVTKA
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHCCCCCCCHHHHHHHHHHH
RILQAVTEAKGERAAERIAHLKKGDMAREAEALLADSGWLPEALRNQPSDTAGEETAETD
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCHHCCC
GETAMGEGEDLADTEEPEVISSSIAAE
CCCCCCCCCCCCCCCCCHHHHHHHCCC
>Mature Secondary Structure 
ATSVQKITLSSSRDIPFNKLVLSQSNVRRVKAGVSIEELAEDIARRGLLQGLNVRTVID
CCCCEEEEECCCCCCCHHHEEECCCHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEEEE
ADGVETGMYEIPAGGRRYRALELLVKRKRLARTAPVPCILREGGIAEEDSLAENVQRAPL
CCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHCCC
HPLDQFRAFLALREKGQSEEEIAAAFFVSVAVVKQRLKLASVSPKLLDVYAEDGLTLDQL
CHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHH
MAFTVSGDHERQEQVLERLAQAYDKQPHAIRRMMTEGAVRASDKRARFIGIGAYETAGGT
HHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCHH
VLRDLFQGDDGGWLQDVTLVDRMVAAKLAIEADGIRGEGWKWIEVAPDFAYGHTYGLRQL
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHEECCCCCCCEEEEEECCCCCCCCHHHHHHH
RGEPTPLTEEEEAARARAQAAYDRLSEEYADADELPEEVDARLGELEAVLEAFETRPLAF
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHHHHHHHHCCCCCC
DPAEVGRAGAFVSIAQDGKLRVERGYVCPEDEVPVVQDDEAPAGTDGEDHAASAPRQEAA
CHHHHCCCCCEEEEECCCCEEEECCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCHHHHC
VGDAPAEPEEEDGLAPISDRLLTELTTHRTLGLRHALGEQPDVAFLAAVHALTLKAFYVY
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHEEEEE
GSDSCLELDLKSVSFNAQAPGLNDSVSAEAIRVRHENWAKALPKEPGTLWDTLSGWERDS
CCCCEEEEEEHHEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCC
QAALFAHVVSLSVNAVHEAWNRRPRAFAHADRLAQAVGLDMAAAGWRPTVDTFLGRVTKA
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHCCCCCCCHHHHHHHHHHH
RILQAVTEAKGERAAERIAHLKKGDMAREAEALLADSGWLPEALRNQPSDTAGEETAETD
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCHHCCC
GETAMGEGEDLADTEEPEVISSSIAAE
CCCCCCCCCCCCCCCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9722640; 9628576 [H]