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The map label for this gene is 154244510

Identifier: 154244510

GI number: 154244510

Start: 625399

End: 626430

Strand: Direct

Name: 154244510

Synonym: Xaut_0555

Alternate gene names: NA

Gene position: 625399-626430 (Clockwise)

Preceding gene: 154244509

Following gene: 154244513

Centisome position: 11.78

GC content: 63.28

Gene sequence:

>1032_bases
ATGTTCACTGACCGCCGTGCGAACAGCCTGCCAACCCGCCGCGTGCGCCAACCCTGGCCGGCGGACAGGCCCTTCAAAAT
CCTCTCGCTCGACGGCGGGGGGATCAGGGGCATCTACACCGCTGAAATCCTGCGGCGTTGTGAAGAGAGTTTTTGCGGCG
GCGCGCCTGTGGCGCAGCATTTCGACATGATCGCCGGCACATCGACCGGCGGCATCATCGCCCTCGGATTGGGCCTGGGC
ATACCGACCGCCGAGATAACCGGCTTCTATCACGATGATGGCCGGAAGATATTTCCGCCGCTGCCGGATGGATGGATCGG
CCGGGTCCGCCGATTCCTGCGGTCCCTCACCGGGCCGAAGCTGATTCACGAAGAGCTGGAAGAGGCTCTGAAGCGCCGGT
TCACCGACCATCTTCTCGGCGACTCCATGACCCGGCTGGTCATTCCGGCCTTCATGATGCCGAAGACTGAAATCGCCGTC
TTCAAGACCGATCATCACGCGGATTTCCGGAACGATCACGCGACCCCGATGTGGAAGGTGGCGCGGGCGACCTCGGCCGC
GCCGACCTATCTCAAGGGGCTTGAACACGAACCGAGCGGCCGGATTTTCATCGACGGCGGCGTATGGGCCAACAATCCGG
TCATGGTCGCGCTCGTCGATGCCATCACCGCCTACGATATCAGTTTCGACCAGGTGGAAATTCTCAGCATCGGGACCGGC
AATGCGCCCTTCGCCCTGCGTAAGCCCGCCGTATTCCGGGGTCTGATCGCGTGGCGGGAAGCAATTAAAGCGGCGATGTT
CCTGACCACCGACAACGCGACAGCGCAGGCAAAGCTGCTGCTCGGGCCAGAGCGCTGCCTGCGTATCGAGCCCGCCGAAG
CGGATGCGGGCATCGAGATGGACGACTATGACGAGGCGTTTGCGCGCCTGCCGGACCGCGCAGCGGAACATTTCGAGGGC
CGGCGCACCGAGATTTCCACGTTCTTCGGGCAGAAGGTGTTGCCACGCGAGCGGCAGTACTCCGGCAAGTAG

Upstream 100 bases:

>100_bases
TGGCACCTGACCGGCCAATGGCTCGCGCCCGGCGTCGGTTATGAGAGCGTGGCGCGCATGCACGCGGCGGACGAGGAGAT
CATCCGGATGGTGAAAGCCG

Downstream 100 bases:

>100_bases
GTCGTCCGTCTGATCGAGCCCCCGCGGCCACAGGATTCGAACGACCGAAAGGCCTGCCGGATCGCGGCGGAAAAAGCGAT
GGCTGCGTTTTGAGGTTCAC

Product: patatin

Products: NA

Alternate protein names: Patatin-Related Protein; Patatin-Like Phospholipase; Patatin Family Protein; Phospholipase Patatin Family; Patatin-Like Protein; Patatin Family Phospholipase; Phospholipase

Number of amino acids: Translated: 343; Mature: 343

Protein sequence:

>343_residues
MFTDRRANSLPTRRVRQPWPADRPFKILSLDGGGIRGIYTAEILRRCEESFCGGAPVAQHFDMIAGTSTGGIIALGLGLG
IPTAEITGFYHDDGRKIFPPLPDGWIGRVRRFLRSLTGPKLIHEELEEALKRRFTDHLLGDSMTRLVIPAFMMPKTEIAV
FKTDHHADFRNDHATPMWKVARATSAAPTYLKGLEHEPSGRIFIDGGVWANNPVMVALVDAITAYDISFDQVEILSIGTG
NAPFALRKPAVFRGLIAWREAIKAAMFLTTDNATAQAKLLLGPERCLRIEPAEADAGIEMDDYDEAFARLPDRAAEHFEG
RRTEISTFFGQKVLPRERQYSGK

Sequences:

>Translated_343_residues
MFTDRRANSLPTRRVRQPWPADRPFKILSLDGGGIRGIYTAEILRRCEESFCGGAPVAQHFDMIAGTSTGGIIALGLGLG
IPTAEITGFYHDDGRKIFPPLPDGWIGRVRRFLRSLTGPKLIHEELEEALKRRFTDHLLGDSMTRLVIPAFMMPKTEIAV
FKTDHHADFRNDHATPMWKVARATSAAPTYLKGLEHEPSGRIFIDGGVWANNPVMVALVDAITAYDISFDQVEILSIGTG
NAPFALRKPAVFRGLIAWREAIKAAMFLTTDNATAQAKLLLGPERCLRIEPAEADAGIEMDDYDEAFARLPDRAAEHFEG
RRTEISTFFGQKVLPRERQYSGK
>Mature_343_residues
MFTDRRANSLPTRRVRQPWPADRPFKILSLDGGGIRGIYTAEILRRCEESFCGGAPVAQHFDMIAGTSTGGIIALGLGLG
IPTAEITGFYHDDGRKIFPPLPDGWIGRVRRFLRSLTGPKLIHEELEEALKRRFTDHLLGDSMTRLVIPAFMMPKTEIAV
FKTDHHADFRNDHATPMWKVARATSAAPTYLKGLEHEPSGRIFIDGGVWANNPVMVALVDAITAYDISFDQVEILSIGTG
NAPFALRKPAVFRGLIAWREAIKAAMFLTTDNATAQAKLLLGPERCLRIEPAEADAGIEMDDYDEAFARLPDRAAEHFEG
RRTEISTFFGQKVLPRERQYSGK

Specific function: Unknown

COG id: COG3621

COG function: function code R; Patatin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI48525351, Length=334, Percent_Identity=27.2455089820359, Blast_Score=83, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI32566887, Length=280, Percent_Identity=28.9285714285714, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI17565150, Length=280, Percent_Identity=28.9285714285714, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI193208905, Length=280, Percent_Identity=28.9285714285714, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI17544092, Length=247, Percent_Identity=27.1255060728745, Blast_Score=79, Evalue=4e-15,
Organism=Caenorhabditis elegans, GI17541042, Length=269, Percent_Identity=27.8810408921933, Blast_Score=74, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI212646132, Length=256, Percent_Identity=28.125, Blast_Score=66, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38148; Mature: 38148

Theoretical pI: Translated: 7.70; Mature: 7.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFTDRRANSLPTRRVRQPWPADRPFKILSLDGGGIRGIYTAEILRRCEESFCGGAPVAQH
CCCCCCCCCCCHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCHHHH
FDMIAGTSTGGIIALGLGLGIPTAEITGFYHDDGRKIFPPLPDGWIGRVRRFLRSLTGPK
HHHHHCCCCCCEEEEEECCCCCHHHEEEEEECCCCEECCCCCCHHHHHHHHHHHHCCCHH
LIHEELEEALKRRFTDHLLGDSMTRLVIPAFMMPKTEIAVFKTDHHADFRNDHATPMWKV
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHH
ARATSAAPTYLKGLEHEPSGRIFIDGGVWANNPVMVALVDAITAYDISFDQVEILSIGTG
HHHCCCCCHHHHCCCCCCCCCEEEECCEECCCCEEEEEEHHHHHHCCCCCCEEEEEECCC
NAPFALRKPAVFRGLIAWREAIKAAMFLTTDNATAQAKLLLGPERCLRIEPAEADAGIEM
CCCCEECCHHHHHHHHHHHHHHHHEEEEEECCCCEEEEEEECHHHHEEECCCCCCCCCCC
DDYDEAFARLPDRAAEHFEGRRTEISTFFGQKVLPRERQYSGK
CCHHHHHHHCCHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MFTDRRANSLPTRRVRQPWPADRPFKILSLDGGGIRGIYTAEILRRCEESFCGGAPVAQH
CCCCCCCCCCCHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCHHHH
FDMIAGTSTGGIIALGLGLGIPTAEITGFYHDDGRKIFPPLPDGWIGRVRRFLRSLTGPK
HHHHHCCCCCCEEEEEECCCCCHHHEEEEEECCCCEECCCCCCHHHHHHHHHHHHCCCHH
LIHEELEEALKRRFTDHLLGDSMTRLVIPAFMMPKTEIAVFKTDHHADFRNDHATPMWKV
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHH
ARATSAAPTYLKGLEHEPSGRIFIDGGVWANNPVMVALVDAITAYDISFDQVEILSIGTG
HHHCCCCCHHHHCCCCCCCCCEEEECCEECCCCEEEEEEHHHHHHCCCCCCEEEEEECCC
NAPFALRKPAVFRGLIAWREAIKAAMFLTTDNATAQAKLLLGPERCLRIEPAEADAGIEM
CCCCEECCHHHHHHHHHHHHHHHHEEEEEECCCCEEEEEEECHHHHEEECCCCCCCCCCC
DDYDEAFARLPDRAAEHFEGRRTEISTFFGQKVLPRERQYSGK
CCHHHHHHHCCHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA