| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is ecaIM [H]
Identifier: 154244502
GI number: 154244502
Start: 613154
End: 615412
Strand: Direct
Name: ecaIM [H]
Synonym: Xaut_0547
Alternate gene names: 154244502
Gene position: 613154-615412 (Clockwise)
Preceding gene: 154244501
Following gene: 154244503
Centisome position: 11.55
GC content: 59.01
Gene sequence:
>2259_bases GTGAGTCTGACTGACCGGGAGAAAGAACAGCTTAAGGCCATGATCGACGCGGGCCAGCCGCTGCCGCCACGATACAAGGC CGTGCTGTTCGACCAGCCGCATGAAGCGGAGTTGATCTGGCCGGGAAAGACATCGGAAGTCACCAATGTCGTCCTCCCCT TTCAGTCGATCGAGCAGATCGACGAGCCGCGAGCCGGCACGCAGGCCGGGACTACTGACTTGTTCGCCTTCGACCAGGCC ACCGGGCGGCAGACGGGCGGCTGGGCGAACAAGCTTATCTGGGGCGACAATAAACTGGTCATCGCGTCGCTGAAGAACGG ACCTCTGCGTCGCCAGATTGAAGACGCCGGCGGCCTGAAGCTGGTCTATATCGATCCGCCGTTCGACGTCGGCGCCGACT TTTCGTTCGATATCGAGGTCGGAGATGAGAGTTTTACCAAACAGCCCAGCGTGATCGAAGAGGTCGCTTACCGCGACACA TGGGGCGCCGGAACCCAATCATACGTTCATATGCTCTATGAACGTCTCTGTTTGATCCGCGACCTGCTGTCGCCGGACGG CAGCCTCTATGTGCATGTCGGGTGGCAGGTGAGCGGGTACGTCCGGGTCATTCTCGACGAGATTTTCGGAAAGGGTGGCG CGCCGGGCTTGCCCGGATTTCGTAATGAGATTGCTTGGAAATGCACAAGCGCCCACAGCGATAGCGGCCGCTATGGCATC AATTGGCAAACCATCTTTTACTATACAAAGGGCGGCTCCTATACGCTCAACGAAACATATCAAGAGTACGATCAAGACTA CGTTGACCAATATTATCGCTACAAAGACCCGAGCGGCCGCCGCTTCATGTCGGACAACTTGAATGCAGCGGGCTTGCAGG GAGGTGGATACCCCTATGAATGGAAGGGCATAAAAAGAACTTGGCGCTGCCCTCCTGAGACAATGAAGCGGCTCGATGAA GAAGGTAAGATATTCTACACGAAGAACGGCGTCCCGCGACTTAAGCGTTATTTGGACGAGGCCAAAGGCTTAAGCTGTCA GACTCTCTGGGCCGACAAGGCCGTACAATACGTAGTCTCCTGGGGCCAAGAGAACACCGGGTATGAAACTCAGAAATCAG AGTCATTACTGTCCAGAATCATCGATGCGTCATCCAAGCCGGGCGACTTGATCGCCGACTTCTTCTGCGGCTCGGGCACC ACATTGGCCGTTGCCGAGAAGCTGGGCCGAAAATGGATCGGGGCGGATCTTGGCCGGTTCGCCATCCATACCAGCCGCAA GCGCATGATCGGCGTGCAGCGCGGATTGCAGGAGGCAGGGAAGCCGTATCGCAGCTTCGAGATTCTGAACCTCGGGAAAT ATGAGCGGCAGTATTTCGCGGGTATCGATCCCACGCTGCCGGAAGAGCAGCGCCGCGCGATCTCCCTGCAAAAGGAAGAG CATTACCTCACGCTGATCCTCAGCGCCTACAAGGCCGAGCGCGTGTTCCAGTCGCCGCCTTTCCACGGCAAGAAGGCCGG GGCGCTGGTACTCGTCGGGCCGATCGATGCGCCGGTCACGCAATCGCAGGTCCATGAGGCTGTTGAAGCCGCCCGCAAGC TGCGCGTCAGCAAGCTCGACATTCTCGGCTTCGAGTTCGAGATGGGCATCGTGCCCCACGCGCAGGACGAAGCGCGGGCC AAGGGCGTCAACGTCGCGCTTCGCTACATTCCCAAGGACGTGTTTGATCGCCGGGCCGTCGATAAGGGCCAGGTCGCCTT CTACGATGTCGCCTATGTCGATGTGCAGCCGGTCGTGAAGGGCGCGTCCGTCACGGTGCGGCTGAAGGATTTTGGCGTCT ATTATCGTCAGGACGATGTGGGCGCGTTGATCGAGTCGTTGAAGAATGGCGGCTCCAAGGTCACGGTCGATGCCGGGCAG GTCGTGAAAATCACCAAGGACAAGAAGGGCGTGGTCAGCCGCGAGGTCCTGACCAAAGCCTGGAGCGACTGGGTCGATTA CTGGGCCGTCGATTTCGACTTCGAGAACCGCAAGGAGATCGTGCGGATCACCGAGGCCGACGGCGCCGAGCGCGAAGCCT GGACCGGGGGCTACATCTTCGAGAACGAATGGCAGTCATTCCGCACCCGGCAGGAGCGCACGCTGGAGCTGACGAGCGCG CCGCACGACTACCCGAAGAAGGGCCGGTACAAGATCGGCGTCAAGGTCATCGATATTTTCGGCAATGACACGACCAAGGT CGTCGAGGTTTCGCTGTGA
Upstream 100 bases:
>100_bases CGACCCGTCGTCGTCGTCATGTCGGTAGAAGAGTACGAGCGCCTGACAGTCGCGGACTCCGCGCGCCAGGCACATGGGGA ACCGGGCAAGGGGGTCGCCA
Downstream 100 bases:
>100_bases AGGCCGGCCCTATCGAAATCGGGCGGCTCCTGCAAAACCGCCAGCGTTTCTGCGTTCCCATCTACCAGCGCCATTATGTC TGGACGCGGCAGAAGCAATG
Product: DNA methylase N-4/N-6 domain-containing protein
Products: NA
Alternate protein names: M.EcaI; Adenine-specific methyltransferase EcaI [H]
Number of amino acids: Translated: 752; Mature: 751
Protein sequence:
>752_residues MSLTDREKEQLKAMIDAGQPLPPRYKAVLFDQPHEAELIWPGKTSEVTNVVLPFQSIEQIDEPRAGTQAGTTDLFAFDQA TGRQTGGWANKLIWGDNKLVIASLKNGPLRRQIEDAGGLKLVYIDPPFDVGADFSFDIEVGDESFTKQPSVIEEVAYRDT WGAGTQSYVHMLYERLCLIRDLLSPDGSLYVHVGWQVSGYVRVILDEIFGKGGAPGLPGFRNEIAWKCTSAHSDSGRYGI NWQTIFYYTKGGSYTLNETYQEYDQDYVDQYYRYKDPSGRRFMSDNLNAAGLQGGGYPYEWKGIKRTWRCPPETMKRLDE EGKIFYTKNGVPRLKRYLDEAKGLSCQTLWADKAVQYVVSWGQENTGYETQKSESLLSRIIDASSKPGDLIADFFCGSGT TLAVAEKLGRKWIGADLGRFAIHTSRKRMIGVQRGLQEAGKPYRSFEILNLGKYERQYFAGIDPTLPEEQRRAISLQKEE HYLTLILSAYKAERVFQSPPFHGKKAGALVLVGPIDAPVTQSQVHEAVEAARKLRVSKLDILGFEFEMGIVPHAQDEARA KGVNVALRYIPKDVFDRRAVDKGQVAFYDVAYVDVQPVVKGASVTVRLKDFGVYYRQDDVGALIESLKNGGSKVTVDAGQ VVKITKDKKGVVSREVLTKAWSDWVDYWAVDFDFENRKEIVRITEADGAEREAWTGGYIFENEWQSFRTRQERTLELTSA PHDYPKKGRYKIGVKVIDIFGNDTTKVVEVSL
Sequences:
>Translated_752_residues MSLTDREKEQLKAMIDAGQPLPPRYKAVLFDQPHEAELIWPGKTSEVTNVVLPFQSIEQIDEPRAGTQAGTTDLFAFDQA TGRQTGGWANKLIWGDNKLVIASLKNGPLRRQIEDAGGLKLVYIDPPFDVGADFSFDIEVGDESFTKQPSVIEEVAYRDT WGAGTQSYVHMLYERLCLIRDLLSPDGSLYVHVGWQVSGYVRVILDEIFGKGGAPGLPGFRNEIAWKCTSAHSDSGRYGI NWQTIFYYTKGGSYTLNETYQEYDQDYVDQYYRYKDPSGRRFMSDNLNAAGLQGGGYPYEWKGIKRTWRCPPETMKRLDE EGKIFYTKNGVPRLKRYLDEAKGLSCQTLWADKAVQYVVSWGQENTGYETQKSESLLSRIIDASSKPGDLIADFFCGSGT TLAVAEKLGRKWIGADLGRFAIHTSRKRMIGVQRGLQEAGKPYRSFEILNLGKYERQYFAGIDPTLPEEQRRAISLQKEE HYLTLILSAYKAERVFQSPPFHGKKAGALVLVGPIDAPVTQSQVHEAVEAARKLRVSKLDILGFEFEMGIVPHAQDEARA KGVNVALRYIPKDVFDRRAVDKGQVAFYDVAYVDVQPVVKGASVTVRLKDFGVYYRQDDVGALIESLKNGGSKVTVDAGQ VVKITKDKKGVVSREVLTKAWSDWVDYWAVDFDFENRKEIVRITEADGAEREAWTGGYIFENEWQSFRTRQERTLELTSA PHDYPKKGRYKIGVKVIDIFGNDTTKVVEVSL >Mature_751_residues SLTDREKEQLKAMIDAGQPLPPRYKAVLFDQPHEAELIWPGKTSEVTNVVLPFQSIEQIDEPRAGTQAGTTDLFAFDQAT GRQTGGWANKLIWGDNKLVIASLKNGPLRRQIEDAGGLKLVYIDPPFDVGADFSFDIEVGDESFTKQPSVIEEVAYRDTW GAGTQSYVHMLYERLCLIRDLLSPDGSLYVHVGWQVSGYVRVILDEIFGKGGAPGLPGFRNEIAWKCTSAHSDSGRYGIN WQTIFYYTKGGSYTLNETYQEYDQDYVDQYYRYKDPSGRRFMSDNLNAAGLQGGGYPYEWKGIKRTWRCPPETMKRLDEE GKIFYTKNGVPRLKRYLDEAKGLSCQTLWADKAVQYVVSWGQENTGYETQKSESLLSRIIDASSKPGDLIADFFCGSGTT LAVAEKLGRKWIGADLGRFAIHTSRKRMIGVQRGLQEAGKPYRSFEILNLGKYERQYFAGIDPTLPEEQRRAISLQKEEH YLTLILSAYKAERVFQSPPFHGKKAGALVLVGPIDAPVTQSQVHEAVEAARKLRVSKLDILGFEFEMGIVPHAQDEARAK GVNVALRYIPKDVFDRRAVDKGQVAFYDVAYVDVQPVVKGASVTVRLKDFGVYYRQDDVGALIESLKNGGSKVTVDAGQV VKITKDKKGVVSREVLTKAWSDWVDYWAVDFDFENRKEIVRITEADGAEREAWTGGYIFENEWQSFRTRQERTLELTSAP HDYPKKGRYKIGVKVIDIFGNDTTKVVEVSL
Specific function: This methylase recognizes the double-stranded sequence GGTNACC, causes specific methylation on A-5 on both strands and protects the DNA from cleavage by the EcaI endonuclease [H]
COG id: COG2189
COG function: function code L; Adenine specific DNA methylase Mod
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the N(4)/N(6)-methyltransferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002295 - InterPro: IPR002941 - InterPro: IPR002052 [H]
Pfam domain/function: PF01555 N6_N4_Mtase [H]
EC number: =2.1.1.72 [H]
Molecular weight: Translated: 84762; Mature: 84630
Theoretical pI: Translated: 6.70; Mature: 6.70
Prosite motif: PS00092 N6_MTASE ; PS00216 SUGAR_TRANSPORT_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLTDREKEQLKAMIDAGQPLPPRYKAVLFDQPHEAELIWPGKTSEVTNVVLPFQSIEQI CCCCCHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCEEECCCCCCCHHEEEECHHHHHHH DEPRAGTQAGTTDLFAFDQATGRQTGGWANKLIWGDNKLVIASLKNGPLRRQIEDAGGLK CCCCCCCCCCCCEEEEECCCCCCCCCCCCCCEEECCCEEEEEECCCCCCHHHHHCCCCEE LVYIDPPFDVGADFSFDIEVGDESFTKQPSVIEEVAYRDTWGAGTQSYVHMLYERLCLIR EEEECCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH DLLSPDGSLYVHVGWQVSGYVRVILDEIFGKGGAPGLPGFRNEIAWKCTSAHSDSGRYGI HHHCCCCCEEEEECCEECCHHHHHHHHHHCCCCCCCCCCCCHHHEEEEECCCCCCCCCCC NWQTIFYYTKGGSYTLNETYQEYDQDYVDQYYRYKDPSGRRFMSDNLNAAGLQGGGYPYE EEEEEEEEECCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCCCCCCCEE WKGIKRTWRCPPETMKRLDEEGKIFYTKNGVPRLKRYLDEAKGLSCQTLWADKAVQYVVS ECCCCCCCCCCHHHHHHCCCCCCEEEECCCCHHHHHHHHHHCCCEEEEHHHHHHHHHHHH WGQENTGYETQKSESLLSRIIDASSKPGDLIADFFCGSGTTLAVAEKLGRKWIGADLGRF CCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCEEHHHHHHCHHHHCCCHHHH AIHTSRKRMIGVQRGLQEAGKPYRSFEILNLGKYERQYFAGIDPTLPEEQRRAISLQKEE HHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHCCCCCCCCHHHHHHCCCCCCC HYLTLILSAYKAERVFQSPPFHGKKAGALVLVGPIDAPVTQSQVHEAVEAARKLRVSKLD CEEEEHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHEEE ILGFEFEMGIVPHAQDEARAKGVNVALRYIPKDVFDRRAVDKGQVAFYDVAYVDVQPVVK EEEEEEEECCCCCCCHHHHHCCCEEEEECCCHHHHHHCCCCCCCEEEEEEEEEEHHHCCC GASVTVRLKDFGVYYRQDDVGALIESLKNGGSKVTVDAGQVVKITKDKKGVVSREVLTKA CCEEEEEEEECEEEEEECHHHHHHHHHHCCCCEEEEECCCEEEEECCCCCHHHHHHHHHH WSDWVDYWAVDFDFENRKEIVRITEADGAEREAWTGGYIFENEWQSFRTRQERTLELTSA HHHHHHHEEEEECCCCCCEEEEEECCCCCCCCCCCCCEEECCCHHHHHHHHHHEEEECCC PHDYPKKGRYKIGVKVIDIFGNDTTKVVEVSL CCCCCCCCCEEEEEEEEEEECCCCEEEEEEEC >Mature Secondary Structure SLTDREKEQLKAMIDAGQPLPPRYKAVLFDQPHEAELIWPGKTSEVTNVVLPFQSIEQI CCCCHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCEEECCCCCCCHHEEEECHHHHHHH DEPRAGTQAGTTDLFAFDQATGRQTGGWANKLIWGDNKLVIASLKNGPLRRQIEDAGGLK CCCCCCCCCCCCEEEEECCCCCCCCCCCCCCEEECCCEEEEEECCCCCCHHHHHCCCCEE LVYIDPPFDVGADFSFDIEVGDESFTKQPSVIEEVAYRDTWGAGTQSYVHMLYERLCLIR EEEECCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH DLLSPDGSLYVHVGWQVSGYVRVILDEIFGKGGAPGLPGFRNEIAWKCTSAHSDSGRYGI HHHCCCCCEEEEECCEECCHHHHHHHHHHCCCCCCCCCCCCHHHEEEEECCCCCCCCCCC NWQTIFYYTKGGSYTLNETYQEYDQDYVDQYYRYKDPSGRRFMSDNLNAAGLQGGGYPYE EEEEEEEEECCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCCCCCCCEE WKGIKRTWRCPPETMKRLDEEGKIFYTKNGVPRLKRYLDEAKGLSCQTLWADKAVQYVVS ECCCCCCCCCCHHHHHHCCCCCCEEEECCCCHHHHHHHHHHCCCEEEEHHHHHHHHHHHH WGQENTGYETQKSESLLSRIIDASSKPGDLIADFFCGSGTTLAVAEKLGRKWIGADLGRF CCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCEEHHHHHHCHHHHCCCHHHH AIHTSRKRMIGVQRGLQEAGKPYRSFEILNLGKYERQYFAGIDPTLPEEQRRAISLQKEE HHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHCCCCCCCCHHHHHHCCCCCCC HYLTLILSAYKAERVFQSPPFHGKKAGALVLVGPIDAPVTQSQVHEAVEAARKLRVSKLD CEEEEHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHEEE ILGFEFEMGIVPHAQDEARAKGVNVALRYIPKDVFDRRAVDKGQVAFYDVAYVDVQPVVK EEEEEEEECCCCCCCHHHHHCCCEEEEECCCHHHHHHCCCCCCCEEEEEEEEEEHHHCCC GASVTVRLKDFGVYYRQDDVGALIESLKNGGSKVTVDAGQVVKITKDKKGVVSREVLTKA CCEEEEEEEECEEEEEECHHHHHHHHHHCCCCEEEEECCCEEEEECCCCCHHHHHHHHHH WSDWVDYWAVDFDFENRKEIVRITEADGAEREAWTGGYIFENEWQSFRTRQERTLELTSA HHHHHHHEEEEECCCCCCEEEEEECCCCCCCCCCCCCEEECCCHHHHHHHHHHEEEECCC PHDYPKKGRYKIGVKVIDIFGNDTTKVVEVSL CCCCCCCCCEEEEEEEEEEECCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2183182 [H]