Definition Xanthobacter autotrophicus Py2 chromosome, complete genome.
Accession NC_009720
Length 5,308,934

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The map label for this gene is 154244499

Identifier: 154244499

GI number: 154244499

Start: 610805

End: 612493

Strand: Direct

Name: 154244499

Synonym: Xaut_0544

Alternate gene names: NA

Gene position: 610805-612493 (Clockwise)

Preceding gene: 154244498

Following gene: 154244500

Centisome position: 11.51

GC content: 68.86

Gene sequence:

>1689_bases
ATGATCCCCAAGGCGAGCCAGCGCGGCGGCGGCCAGGACCTCGCCACCCATCTGCTGAACGCCTTCGACAATGAATATGT
CGAAGTGGCCGAGGTCTCGGGCGCGATTGCGCCGGATTTGCACGGGGCCTTCGCCGAATGGGAGGCCGTCGCCCACGGGC
TGACCCGCTGCCGCAATTATCTCTACAGCCTGTCGATCAACCCGGACCCCGAGCATGGCCCCTTAAGCCGCGACCAGTAT
CGCGCCTATGCCGACCGCGTGGAAAAGGCGCTCGGCTTGGAGGGGCAGCCCCGGGCCTTGGTGTTCCACATCAAGGACGG
CCGCGAGCATTGCCATGTCGTCTGGTCCCGGATCGACTACCAGACCGAGAAGGCCGTCCACATCGCCTTCGACCGCGAAA
AGCTCATGATGGTGACCCGGGAGTTCGCCCGCGAACACGGTCTCGCGCTGCCAAAGGGCTATGGGCCGGAGCGCTCTGAC
GAGCCGCGCCGGAAGGCGTCGGCCTATGAACGGGCGCAGGAACGCGCGACCGGCCTGTCCAAGGAAGAGCGCATGGTCAT
GGTCACGCAGGCCTGGCGCCAGAGCGACAGCCCGCGTGCCTTCGTCCGCGCGCTGGAGGACATGGGTTACATCCTCGCCA
CCGGCAACCGGCCCTATGTCCTGGTCGATATCTACGGCGCCATGAACGCGCTGCCGAAGCTGATCGACGATCGCGCGGTC
CGCACGAAGGACATTCGCGCGTTTCTGAGCAAGGCGTTTCCGCCGGAGTCGCTGCCGACGGTGGACGAGGCGCGCGCCCT
GGCGGCGCAGCACCGCAAAGCCCGGGAGCAGTTCGCCAAGGCCCGTGATGACGGCAGGCAGCGCGAACAACTCGCCCGGG
CCCAGGCCGTCCGCCGTGAAAAGCTCATCGTCGAGCAGGCCGCGAAACGCGCGCGGCAGGAAGAGGAGCGGCGCGCTCTT
GCCCGGCAGCAATTAGCGGAGCGGCAATATCAGCGCGGGCAGTATCTGGCCGAGGTCTCCCGCATCCGGCAGCGGCGAGC
GGAGGCGCGGCCCACCGGGCTTGCCGCCTTCCTGGGGCGGGTGACCGGCGTCAGCGCTGTGATCCGGCAGGTACATCGCT
ATCAGGATGCCCGCCGCTATCTCGCCTTCCGGAATGAGAAGCGCGCGCTTACCGCCCGGCAGGGGCACGAGGTCGCGGAC
CTGGAGCGGCGCCACGCCATGCAGGCGCTCGACATGGCACGCCATGTCAAAGCGCTCGATACAGTGGACGCCCGCGAACG
AAAGGCGCTGGAGGAGCGGCGCGTCCGCGAGCAGCGCGCGCAGGATCGCGGCAGCGCGCAGCACATGCCGGCTCTTTCGC
TGGACCTCAAGCCGCGCGGGCGGGGCGCATCGGTACGCAAGGCCAAGAACCGGCATCAGGACACTTTGCGCGGACGCGAG
GATCGTTTGCCCCGCGGGCCGGCTGTGCCAGGCCTGAAAGAAGATATGGCTCGCGCCGCCCAGCCGCCGCCCGGACGGGA
AGAGGCGGTTGACCTGCGTAGCGCCTTCGCGCAGGCCGCCGATGACGGGCGCGGTGATGGCGGTGATGGCGGAGACGATG
GCCGCATCACGGTCACGCGCGCGACGCGCCGTGGCGAGCGGGAGCGGACACGAGGCCGCAAACGCGGCGATTTCGAGCGG
GAGCGGTAG

Upstream 100 bases:

>100_bases
AAGGGCTGGGGCCGGATGCCGATGACGCTCTGGTCGCCGAGGCTATTCGCGACCTCCATGAAATCCGCGCCGCCTGCCTC
AAGACGTTGGGACGCTCGCC

Downstream 100 bases:

>100_bases
AGACATTGCCCGCAGCACTTTGTGCGTGTTCATATGCCGCGAGACAGACTCGGGGGCTGGCATGGAGAGGTTCGAGAAAG
AGCGCATGGAGGCGCTCGCC

Product: relaxase/mobilization nuclease family protein

Products: NA

Alternate protein names: Relaxase/Mobilization Nuclease Domain-Containing Protein; Relaxase/Mobilization Nuclease Domain Protein; Ti-Type Conjugative Transfer Relaxase TraA; MobA/MobL Protein

Number of amino acids: Translated: 562; Mature: 562

Protein sequence:

>562_residues
MIPKASQRGGGQDLATHLLNAFDNEYVEVAEVSGAIAPDLHGAFAEWEAVAHGLTRCRNYLYSLSINPDPEHGPLSRDQY
RAYADRVEKALGLEGQPRALVFHIKDGREHCHVVWSRIDYQTEKAVHIAFDREKLMMVTREFAREHGLALPKGYGPERSD
EPRRKASAYERAQERATGLSKEERMVMVTQAWRQSDSPRAFVRALEDMGYILATGNRPYVLVDIYGAMNALPKLIDDRAV
RTKDIRAFLSKAFPPESLPTVDEARALAAQHRKAREQFAKARDDGRQREQLARAQAVRREKLIVEQAAKRARQEEERRAL
ARQQLAERQYQRGQYLAEVSRIRQRRAEARPTGLAAFLGRVTGVSAVIRQVHRYQDARRYLAFRNEKRALTARQGHEVAD
LERRHAMQALDMARHVKALDTVDARERKALEERRVREQRAQDRGSAQHMPALSLDLKPRGRGASVRKAKNRHQDTLRGRE
DRLPRGPAVPGLKEDMARAAQPPPGREEAVDLRSAFAQAADDGRGDGGDGGDDGRITVTRATRRGERERTRGRKRGDFER
ER

Sequences:

>Translated_562_residues
MIPKASQRGGGQDLATHLLNAFDNEYVEVAEVSGAIAPDLHGAFAEWEAVAHGLTRCRNYLYSLSINPDPEHGPLSRDQY
RAYADRVEKALGLEGQPRALVFHIKDGREHCHVVWSRIDYQTEKAVHIAFDREKLMMVTREFAREHGLALPKGYGPERSD
EPRRKASAYERAQERATGLSKEERMVMVTQAWRQSDSPRAFVRALEDMGYILATGNRPYVLVDIYGAMNALPKLIDDRAV
RTKDIRAFLSKAFPPESLPTVDEARALAAQHRKAREQFAKARDDGRQREQLARAQAVRREKLIVEQAAKRARQEEERRAL
ARQQLAERQYQRGQYLAEVSRIRQRRAEARPTGLAAFLGRVTGVSAVIRQVHRYQDARRYLAFRNEKRALTARQGHEVAD
LERRHAMQALDMARHVKALDTVDARERKALEERRVREQRAQDRGSAQHMPALSLDLKPRGRGASVRKAKNRHQDTLRGRE
DRLPRGPAVPGLKEDMARAAQPPPGREEAVDLRSAFAQAADDGRGDGGDGGDDGRITVTRATRRGERERTRGRKRGDFER
ER
>Mature_562_residues
MIPKASQRGGGQDLATHLLNAFDNEYVEVAEVSGAIAPDLHGAFAEWEAVAHGLTRCRNYLYSLSINPDPEHGPLSRDQY
RAYADRVEKALGLEGQPRALVFHIKDGREHCHVVWSRIDYQTEKAVHIAFDREKLMMVTREFAREHGLALPKGYGPERSD
EPRRKASAYERAQERATGLSKEERMVMVTQAWRQSDSPRAFVRALEDMGYILATGNRPYVLVDIYGAMNALPKLIDDRAV
RTKDIRAFLSKAFPPESLPTVDEARALAAQHRKAREQFAKARDDGRQREQLARAQAVRREKLIVEQAAKRARQEEERRAL
ARQQLAERQYQRGQYLAEVSRIRQRRAEARPTGLAAFLGRVTGVSAVIRQVHRYQDARRYLAFRNEKRALTARQGHEVAD
LERRHAMQALDMARHVKALDTVDARERKALEERRVREQRAQDRGSAQHMPALSLDLKPRGRGASVRKAKNRHQDTLRGRE
DRLPRGPAVPGLKEDMARAAQPPPGREEAVDLRSAFAQAADDGRGDGGDGGDDGRITVTRATRRGERERTRGRKRGDFER
ER

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 63855; Mature: 63855

Theoretical pI: Translated: 10.68; Mature: 10.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPKASQRGGGQDLATHLLNAFDNEYVEVAEVSGAIAPDLHGAFAEWEAVAHGLTRCRNY
CCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
LYSLSINPDPEHGPLSRDQYRAYADRVEKALGLEGQPRALVFHIKDGREHCHVVWSRIDY
HEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHH
QTEKAVHIAFDREKLMMVTREFAREHGLALPKGYGPERSDEPRRKASAYERAQERATGLS
CCCCEEEEEECHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC
KEERMVMVTQAWRQSDSPRAFVRALEDMGYILATGNRPYVLVDIYGAMNALPKLIDDRAV
HHHHEEHHHHHHCCCCCHHHHHHHHHHCCEEEEECCCCEEEEEHHHHHHHHHHHHHHHHH
RTKDIRAFLSKAFPPESLPTVDEARALAAQHRKAREQFAKARDDGRQREQLARAQAVRRE
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
KLIVEQAAKRARQEEERRALARQQLAERQYQRGQYLAEVSRIRQRRAEARPTGLAAFLGR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
VTGVSAVIRQVHRYQDARRYLAFRNEKRALTARQGHEVADLERRHAMQALDMARHVKALD
HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
TVDARERKALEERRVREQRAQDRGSAQHMPALSLDLKPRGRGASVRKAKNRHQDTLRGRE
HHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCHH
DRLPRGPAVPGLKEDMARAAQPPPGREEAVDLRSAFAQAADDGRGDGGDGGDDGRITVTR
HCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEE
ATRRGERERTRGRKRGDFERER
CHHCCHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MIPKASQRGGGQDLATHLLNAFDNEYVEVAEVSGAIAPDLHGAFAEWEAVAHGLTRCRNY
CCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
LYSLSINPDPEHGPLSRDQYRAYADRVEKALGLEGQPRALVFHIKDGREHCHVVWSRIDY
HEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHH
QTEKAVHIAFDREKLMMVTREFAREHGLALPKGYGPERSDEPRRKASAYERAQERATGLS
CCCCEEEEEECHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC
KEERMVMVTQAWRQSDSPRAFVRALEDMGYILATGNRPYVLVDIYGAMNALPKLIDDRAV
HHHHEEHHHHHHCCCCCHHHHHHHHHHCCEEEEECCCCEEEEEHHHHHHHHHHHHHHHHH
RTKDIRAFLSKAFPPESLPTVDEARALAAQHRKAREQFAKARDDGRQREQLARAQAVRRE
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
KLIVEQAAKRARQEEERRALARQQLAERQYQRGQYLAEVSRIRQRRAEARPTGLAAFLGR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
VTGVSAVIRQVHRYQDARRYLAFRNEKRALTARQGHEVADLERRHAMQALDMARHVKALD
HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
TVDARERKALEERRVREQRAQDRGSAQHMPALSLDLKPRGRGASVRKAKNRHQDTLRGRE
HHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCHH
DRLPRGPAVPGLKEDMARAAQPPPGREEAVDLRSAFAQAADDGRGDGGDGGDDGRITVTR
HCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEE
ATRRGERERTRGRKRGDFERER
CHHCCHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA