| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is 154244499
Identifier: 154244499
GI number: 154244499
Start: 610805
End: 612493
Strand: Direct
Name: 154244499
Synonym: Xaut_0544
Alternate gene names: NA
Gene position: 610805-612493 (Clockwise)
Preceding gene: 154244498
Following gene: 154244500
Centisome position: 11.51
GC content: 68.86
Gene sequence:
>1689_bases ATGATCCCCAAGGCGAGCCAGCGCGGCGGCGGCCAGGACCTCGCCACCCATCTGCTGAACGCCTTCGACAATGAATATGT CGAAGTGGCCGAGGTCTCGGGCGCGATTGCGCCGGATTTGCACGGGGCCTTCGCCGAATGGGAGGCCGTCGCCCACGGGC TGACCCGCTGCCGCAATTATCTCTACAGCCTGTCGATCAACCCGGACCCCGAGCATGGCCCCTTAAGCCGCGACCAGTAT CGCGCCTATGCCGACCGCGTGGAAAAGGCGCTCGGCTTGGAGGGGCAGCCCCGGGCCTTGGTGTTCCACATCAAGGACGG CCGCGAGCATTGCCATGTCGTCTGGTCCCGGATCGACTACCAGACCGAGAAGGCCGTCCACATCGCCTTCGACCGCGAAA AGCTCATGATGGTGACCCGGGAGTTCGCCCGCGAACACGGTCTCGCGCTGCCAAAGGGCTATGGGCCGGAGCGCTCTGAC GAGCCGCGCCGGAAGGCGTCGGCCTATGAACGGGCGCAGGAACGCGCGACCGGCCTGTCCAAGGAAGAGCGCATGGTCAT GGTCACGCAGGCCTGGCGCCAGAGCGACAGCCCGCGTGCCTTCGTCCGCGCGCTGGAGGACATGGGTTACATCCTCGCCA CCGGCAACCGGCCCTATGTCCTGGTCGATATCTACGGCGCCATGAACGCGCTGCCGAAGCTGATCGACGATCGCGCGGTC CGCACGAAGGACATTCGCGCGTTTCTGAGCAAGGCGTTTCCGCCGGAGTCGCTGCCGACGGTGGACGAGGCGCGCGCCCT GGCGGCGCAGCACCGCAAAGCCCGGGAGCAGTTCGCCAAGGCCCGTGATGACGGCAGGCAGCGCGAACAACTCGCCCGGG CCCAGGCCGTCCGCCGTGAAAAGCTCATCGTCGAGCAGGCCGCGAAACGCGCGCGGCAGGAAGAGGAGCGGCGCGCTCTT GCCCGGCAGCAATTAGCGGAGCGGCAATATCAGCGCGGGCAGTATCTGGCCGAGGTCTCCCGCATCCGGCAGCGGCGAGC GGAGGCGCGGCCCACCGGGCTTGCCGCCTTCCTGGGGCGGGTGACCGGCGTCAGCGCTGTGATCCGGCAGGTACATCGCT ATCAGGATGCCCGCCGCTATCTCGCCTTCCGGAATGAGAAGCGCGCGCTTACCGCCCGGCAGGGGCACGAGGTCGCGGAC CTGGAGCGGCGCCACGCCATGCAGGCGCTCGACATGGCACGCCATGTCAAAGCGCTCGATACAGTGGACGCCCGCGAACG AAAGGCGCTGGAGGAGCGGCGCGTCCGCGAGCAGCGCGCGCAGGATCGCGGCAGCGCGCAGCACATGCCGGCTCTTTCGC TGGACCTCAAGCCGCGCGGGCGGGGCGCATCGGTACGCAAGGCCAAGAACCGGCATCAGGACACTTTGCGCGGACGCGAG GATCGTTTGCCCCGCGGGCCGGCTGTGCCAGGCCTGAAAGAAGATATGGCTCGCGCCGCCCAGCCGCCGCCCGGACGGGA AGAGGCGGTTGACCTGCGTAGCGCCTTCGCGCAGGCCGCCGATGACGGGCGCGGTGATGGCGGTGATGGCGGAGACGATG GCCGCATCACGGTCACGCGCGCGACGCGCCGTGGCGAGCGGGAGCGGACACGAGGCCGCAAACGCGGCGATTTCGAGCGG GAGCGGTAG
Upstream 100 bases:
>100_bases AAGGGCTGGGGCCGGATGCCGATGACGCTCTGGTCGCCGAGGCTATTCGCGACCTCCATGAAATCCGCGCCGCCTGCCTC AAGACGTTGGGACGCTCGCC
Downstream 100 bases:
>100_bases AGACATTGCCCGCAGCACTTTGTGCGTGTTCATATGCCGCGAGACAGACTCGGGGGCTGGCATGGAGAGGTTCGAGAAAG AGCGCATGGAGGCGCTCGCC
Product: relaxase/mobilization nuclease family protein
Products: NA
Alternate protein names: Relaxase/Mobilization Nuclease Domain-Containing Protein; Relaxase/Mobilization Nuclease Domain Protein; Ti-Type Conjugative Transfer Relaxase TraA; MobA/MobL Protein
Number of amino acids: Translated: 562; Mature: 562
Protein sequence:
>562_residues MIPKASQRGGGQDLATHLLNAFDNEYVEVAEVSGAIAPDLHGAFAEWEAVAHGLTRCRNYLYSLSINPDPEHGPLSRDQY RAYADRVEKALGLEGQPRALVFHIKDGREHCHVVWSRIDYQTEKAVHIAFDREKLMMVTREFAREHGLALPKGYGPERSD EPRRKASAYERAQERATGLSKEERMVMVTQAWRQSDSPRAFVRALEDMGYILATGNRPYVLVDIYGAMNALPKLIDDRAV RTKDIRAFLSKAFPPESLPTVDEARALAAQHRKAREQFAKARDDGRQREQLARAQAVRREKLIVEQAAKRARQEEERRAL ARQQLAERQYQRGQYLAEVSRIRQRRAEARPTGLAAFLGRVTGVSAVIRQVHRYQDARRYLAFRNEKRALTARQGHEVAD LERRHAMQALDMARHVKALDTVDARERKALEERRVREQRAQDRGSAQHMPALSLDLKPRGRGASVRKAKNRHQDTLRGRE DRLPRGPAVPGLKEDMARAAQPPPGREEAVDLRSAFAQAADDGRGDGGDGGDDGRITVTRATRRGERERTRGRKRGDFER ER
Sequences:
>Translated_562_residues MIPKASQRGGGQDLATHLLNAFDNEYVEVAEVSGAIAPDLHGAFAEWEAVAHGLTRCRNYLYSLSINPDPEHGPLSRDQY RAYADRVEKALGLEGQPRALVFHIKDGREHCHVVWSRIDYQTEKAVHIAFDREKLMMVTREFAREHGLALPKGYGPERSD EPRRKASAYERAQERATGLSKEERMVMVTQAWRQSDSPRAFVRALEDMGYILATGNRPYVLVDIYGAMNALPKLIDDRAV RTKDIRAFLSKAFPPESLPTVDEARALAAQHRKAREQFAKARDDGRQREQLARAQAVRREKLIVEQAAKRARQEEERRAL ARQQLAERQYQRGQYLAEVSRIRQRRAEARPTGLAAFLGRVTGVSAVIRQVHRYQDARRYLAFRNEKRALTARQGHEVAD LERRHAMQALDMARHVKALDTVDARERKALEERRVREQRAQDRGSAQHMPALSLDLKPRGRGASVRKAKNRHQDTLRGRE DRLPRGPAVPGLKEDMARAAQPPPGREEAVDLRSAFAQAADDGRGDGGDGGDDGRITVTRATRRGERERTRGRKRGDFER ER >Mature_562_residues MIPKASQRGGGQDLATHLLNAFDNEYVEVAEVSGAIAPDLHGAFAEWEAVAHGLTRCRNYLYSLSINPDPEHGPLSRDQY RAYADRVEKALGLEGQPRALVFHIKDGREHCHVVWSRIDYQTEKAVHIAFDREKLMMVTREFAREHGLALPKGYGPERSD EPRRKASAYERAQERATGLSKEERMVMVTQAWRQSDSPRAFVRALEDMGYILATGNRPYVLVDIYGAMNALPKLIDDRAV RTKDIRAFLSKAFPPESLPTVDEARALAAQHRKAREQFAKARDDGRQREQLARAQAVRREKLIVEQAAKRARQEEERRAL ARQQLAERQYQRGQYLAEVSRIRQRRAEARPTGLAAFLGRVTGVSAVIRQVHRYQDARRYLAFRNEKRALTARQGHEVAD LERRHAMQALDMARHVKALDTVDARERKALEERRVREQRAQDRGSAQHMPALSLDLKPRGRGASVRKAKNRHQDTLRGRE DRLPRGPAVPGLKEDMARAAQPPPGREEAVDLRSAFAQAADDGRGDGGDGGDDGRITVTRATRRGERERTRGRKRGDFER ER
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 63855; Mature: 63855
Theoretical pI: Translated: 10.68; Mature: 10.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIPKASQRGGGQDLATHLLNAFDNEYVEVAEVSGAIAPDLHGAFAEWEAVAHGLTRCRNY CCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH LYSLSINPDPEHGPLSRDQYRAYADRVEKALGLEGQPRALVFHIKDGREHCHVVWSRIDY HEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHH QTEKAVHIAFDREKLMMVTREFAREHGLALPKGYGPERSDEPRRKASAYERAQERATGLS CCCCEEEEEECHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC KEERMVMVTQAWRQSDSPRAFVRALEDMGYILATGNRPYVLVDIYGAMNALPKLIDDRAV HHHHEEHHHHHHCCCCCHHHHHHHHHHCCEEEEECCCCEEEEEHHHHHHHHHHHHHHHHH RTKDIRAFLSKAFPPESLPTVDEARALAAQHRKAREQFAKARDDGRQREQLARAQAVRRE HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH KLIVEQAAKRARQEEERRALARQQLAERQYQRGQYLAEVSRIRQRRAEARPTGLAAFLGR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH VTGVSAVIRQVHRYQDARRYLAFRNEKRALTARQGHEVADLERRHAMQALDMARHVKALD HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH TVDARERKALEERRVREQRAQDRGSAQHMPALSLDLKPRGRGASVRKAKNRHQDTLRGRE HHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCHH DRLPRGPAVPGLKEDMARAAQPPPGREEAVDLRSAFAQAADDGRGDGGDGGDDGRITVTR HCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEE ATRRGERERTRGRKRGDFERER CHHCCHHHHHCCCCCCCCCCCC >Mature Secondary Structure MIPKASQRGGGQDLATHLLNAFDNEYVEVAEVSGAIAPDLHGAFAEWEAVAHGLTRCRNY CCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH LYSLSINPDPEHGPLSRDQYRAYADRVEKALGLEGQPRALVFHIKDGREHCHVVWSRIDY HEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHH QTEKAVHIAFDREKLMMVTREFAREHGLALPKGYGPERSDEPRRKASAYERAQERATGLS CCCCEEEEEECHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC KEERMVMVTQAWRQSDSPRAFVRALEDMGYILATGNRPYVLVDIYGAMNALPKLIDDRAV HHHHEEHHHHHHCCCCCHHHHHHHHHHCCEEEEECCCCEEEEEHHHHHHHHHHHHHHHHH RTKDIRAFLSKAFPPESLPTVDEARALAAQHRKAREQFAKARDDGRQREQLARAQAVRRE HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH KLIVEQAAKRARQEEERRALARQQLAERQYQRGQYLAEVSRIRQRRAEARPTGLAAFLGR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH VTGVSAVIRQVHRYQDARRYLAFRNEKRALTARQGHEVADLERRHAMQALDMARHVKALD HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH TVDARERKALEERRVREQRAQDRGSAQHMPALSLDLKPRGRGASVRKAKNRHQDTLRGRE HHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCHH DRLPRGPAVPGLKEDMARAAQPPPGREEAVDLRSAFAQAADDGRGDGGDGGDDGRITVTR HCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEE ATRRGERERTRGRKRGDFERER CHHCCHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA