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The map label for this gene is ybhS [H]

Identifier: 154244415

GI number: 154244415

Start: 500776

End: 501912

Strand: Direct

Name: ybhS [H]

Synonym: Xaut_0458

Alternate gene names: 154244415

Gene position: 500776-501912 (Clockwise)

Preceding gene: 154244414

Following gene: 154244416

Centisome position: 9.43

GC content: 65.0

Gene sequence:

>1137_bases
ATGAGTGCGCTCACCGCCACCGCCGGCTTCGCGAGGCGCGTCGGCGCCATGATCGTCAAGGAGTTCATCCAGCTGCGGCG
CGACCGGGTGACGTTCGCCACCATGATCATGATCCCGCTGCTGCAGCTGATCCTGTTCGGCTACGCCATCAACACCACAC
CCCGACACCTGCCCACGGCGGTGTTCGCACACGAGAACACGGACGCGAGCCGCGCCATCCTCGCCGCCTTGCGCAACACC
GCCTTCTTCGACTTCGTGAAGGAGGTCGGGAGCGCGGACGAGGCGGAGCACATGATCCGCGCCGGCGAGGTGCTGTTTTT
CGTGGAGATCCCGGCCGGCTTCGAGCGGGCGCTCAGGCGCGGCGACCAGCCGCAACTGCTGGTGGCGGCCGATGCCACCG
ATCCGGTGGGCTCGGCCAATGCGCTGGCGGCGCTGGCCGGGGTTGTCAGTTCGGCTCTGGTGCGCGAGCGGTTCGTTGAT
GCGGCGGGCGACATGCCGTTCGAGATCGTCCAGCACCGGCGCTACAATCCCGCCGGCACCAGCCAGCTGAACATCGTGCC
CGGCCTGCTGGGTACCATCCTCACCATGACCATGCTGATCTATACCGCGCTGTCGGTGACCCGGGAGACCGAGCGCGGCA
CCATGGAGAGCCTCCTGTCCATGCCGATCCACCCGGTGGAGATCATGCTGGGCAAGATCATCCCCTATGTGCTGGTGGGC
ATCGTGCAGGCGATCCTGATTCTCGGCTCGGGCATGGTGCTGTTCGGGGTGCCGCTGGAAGGCAGCGCCATCTTCCTCGC
GGCGGCGACGCTGCTCTTCATCACCGCGAACCTGTCCATCGGCTATACCTTCTCCACACTGGCGCAGAACCAGCTCCAGG
CGGTGCAGATGTCCTTCATGTTCTTCCTGCCCTCGATTCTTCTGTCCGGCTTCATGTTCCCGTTTTCAGGCATGCCGGCA
TGGGCGCAATGGATCGGCGAGGGCCTGCCGCTCACCCATTACCTGCGCATGGTGCGGGGCATTCTGCTGAAGGGATCAGG
GTTTGGCGACCTGAAGGTGGATGCGGCGGCGCTTGTGGCGCTGATGTTGCTGGCCATGGGCATTGCCGTGGCGAGATTTC
GTCAAACCCTTGACTGA

Upstream 100 bases:

>100_bases
CGCCCTACCGCACCGATGCGCGCCTCGTCATCCGCGCCGACGCCCCCACGCTGGAAGACGTGTTCATCGACCTCATGAGC
CGCTCGAAGGACGACCTGCG

Downstream 100 bases:

>100_bases
ATGCCGCGCGGCACGTTGCCGCTAAGGTGAGCCGCGCCACGATTGGACGGCCTGTGGAAAAAATGCTGCACCCGCAGCGT
TCAGACGGGCTTCGGTCAAG

Product: ABC-2 type transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 378; Mature: 377

Protein sequence:

>378_residues
MSALTATAGFARRVGAMIVKEFIQLRRDRVTFATMIMIPLLQLILFGYAINTTPRHLPTAVFAHENTDASRAILAALRNT
AFFDFVKEVGSADEAEHMIRAGEVLFFVEIPAGFERALRRGDQPQLLVAADATDPVGSANALAALAGVVSSALVRERFVD
AAGDMPFEIVQHRRYNPAGTSQLNIVPGLLGTILTMTMLIYTALSVTRETERGTMESLLSMPIHPVEIMLGKIIPYVLVG
IVQAILILGSGMVLFGVPLEGSAIFLAAATLLFITANLSIGYTFSTLAQNQLQAVQMSFMFFLPSILLSGFMFPFSGMPA
WAQWIGEGLPLTHYLRMVRGILLKGSGFGDLKVDAAALVALMLLAMGIAVARFRQTLD

Sequences:

>Translated_378_residues
MSALTATAGFARRVGAMIVKEFIQLRRDRVTFATMIMIPLLQLILFGYAINTTPRHLPTAVFAHENTDASRAILAALRNT
AFFDFVKEVGSADEAEHMIRAGEVLFFVEIPAGFERALRRGDQPQLLVAADATDPVGSANALAALAGVVSSALVRERFVD
AAGDMPFEIVQHRRYNPAGTSQLNIVPGLLGTILTMTMLIYTALSVTRETERGTMESLLSMPIHPVEIMLGKIIPYVLVG
IVQAILILGSGMVLFGVPLEGSAIFLAAATLLFITANLSIGYTFSTLAQNQLQAVQMSFMFFLPSILLSGFMFPFSGMPA
WAQWIGEGLPLTHYLRMVRGILLKGSGFGDLKVDAAALVALMLLAMGIAVARFRQTLD
>Mature_377_residues
SALTATAGFARRVGAMIVKEFIQLRRDRVTFATMIMIPLLQLILFGYAINTTPRHLPTAVFAHENTDASRAILAALRNTA
FFDFVKEVGSADEAEHMIRAGEVLFFVEIPAGFERALRRGDQPQLLVAADATDPVGSANALAALAGVVSSALVRERFVDA
AGDMPFEIVQHRRYNPAGTSQLNIVPGLLGTILTMTMLIYTALSVTRETERGTMESLLSMPIHPVEIMLGKIIPYVLVGI
VQAILILGSGMVLFGVPLEGSAIFLAAATLLFITANLSIGYTFSTLAQNQLQAVQMSFMFFLPSILLSGFMFPFSGMPAW
AQWIGEGLPLTHYLRMVRGILLKGSGFGDLKVDAAALVALMLLAMGIAVARFRQTLD

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1787011, Length=374, Percent_Identity=31.0160427807487, Blast_Score=157, Evalue=9e-40,
Organism=Escherichia coli, GI48994943, Length=367, Percent_Identity=29.9727520435967, Blast_Score=139, Evalue=3e-34,
Organism=Escherichia coli, GI1787010, Length=367, Percent_Identity=27.7929155313352, Blast_Score=136, Evalue=2e-33,
Organism=Escherichia coli, GI226510979, Length=391, Percent_Identity=28.6445012787724, Blast_Score=113, Evalue=2e-26,
Organism=Drosophila melanogaster, GI24650855, Length=370, Percent_Identity=23.2432432432432, Blast_Score=85, Evalue=8e-17,
Organism=Drosophila melanogaster, GI24650853, Length=370, Percent_Identity=23.2432432432432, Blast_Score=84, Evalue=1e-16,
Organism=Drosophila melanogaster, GI85725260, Length=378, Percent_Identity=22.4867724867725, Blast_Score=69, Evalue=7e-12,
Organism=Drosophila melanogaster, GI85725262, Length=378, Percent_Identity=22.4867724867725, Blast_Score=68, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 40883; Mature: 40752

Theoretical pI: Translated: 7.19; Mature: 7.19

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSALTATAGFARRVGAMIVKEFIQLRRDRVTFATMIMIPLLQLILFGYAINTTPRHLPTA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCH
VFAHENTDASRAILAALRNTAFFDFVKEVGSADEAEHMIRAGEVLFFVEIPAGFERALRR
HEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCEEEEEECCCHHHHHHHC
GDQPQLLVAADATDPVGSANALAALAGVVSSALVRERFVDAAGDMPFEIVQHRRYNPAGT
CCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCC
SQLNIVPGLLGTILTMTMLIYTALSVTRETERGTMESLLSMPIHPVEIMLGKIIPYVLVG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
IVQAILILGSGMVLFGVPLEGSAIFLAAATLLFITANLSIGYTFSTLAQNQLQAVQMSFM
HHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
FFLPSILLSGFMFPFSGMPAWAQWIGEGLPLTHYLRMVRGILLKGSGFGDLKVDAAALVA
HHHHHHHHHHHHCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
LMLLAMGIAVARFRQTLD
HHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SALTATAGFARRVGAMIVKEFIQLRRDRVTFATMIMIPLLQLILFGYAINTTPRHLPTA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCH
VFAHENTDASRAILAALRNTAFFDFVKEVGSADEAEHMIRAGEVLFFVEIPAGFERALRR
HEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCEEEEEECCCHHHHHHHC
GDQPQLLVAADATDPVGSANALAALAGVVSSALVRERFVDAAGDMPFEIVQHRRYNPAGT
CCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCC
SQLNIVPGLLGTILTMTMLIYTALSVTRETERGTMESLLSMPIHPVEIMLGKIIPYVLVG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
IVQAILILGSGMVLFGVPLEGSAIFLAAATLLFITANLSIGYTFSTLAQNQLQAVQMSFM
HHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
FFLPSILLSGFMFPFSGMPAWAQWIGEGLPLTHYLRMVRGILLKGSGFGDLKVDAAALVA
HHHHHHHHHHHHCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
LMLLAMGIAVARFRQTLD
HHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]