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The map label for this gene is ycnJ [H]

Identifier: 154244376

GI number: 154244376

Start: 448805

End: 450535

Strand: Direct

Name: ycnJ [H]

Synonym: Xaut_0419

Alternate gene names: 154244376

Gene position: 448805-450535 (Clockwise)

Preceding gene: 154244375

Following gene: 154244377

Centisome position: 8.45

GC content: 72.15

Gene sequence:

>1731_bases
ATGCGCCCCTCTTGCAGCGGGCGAGCGGGGCTGACGGGAGTGGTTGCCGCCATCGTGGCAGCCACGCGCTTCCTGCCGTG
GACGTCCGACACCCGCACCGTGGCCACCCCGGCCGTTTGCGGGAGGGCCGGCATCCCGGCGGGCGCGCGGGCAATCCTGC
AGGCTGTGCTGGTCATGGCGGGCGCGCTGCTTTTTGCCGGCGACGCCCTCGCCCATGCCTCGCTGGTCCATGCCTCGCCT
GCCGACGGCGCCATGGTGGCCAACGCGCCGCGGACATTCGCGCTCACCTTCAGCGAGCCCATCTCCCCGCTGGTGCTGCG
GCTCGCCGGGGCGGATGGCACCGCCGTCACCCTCGACCGCTTCGTGCAACGCGGCGCGACGCTGGATGTGGAGGCGCCGG
CGGGCCTGCCGAACGGAACGCACGTGCTCATCTGGCGCGTGGTTTCGCAGGACGGTCATCCGATCGGCGGCGTGGTGGCC
TTCTCCATCGGAGCGCCCAGCCCCGGCGTCTCCGCCGCCGCCGTGGAGGTCATCGACTGGCCGGTGCGCATCGCCACCTG
GGTCGCGAGGCTTGCCCTCTATGCCGGACTGTTCGTGGGCGTTGGCGGGGCCTTCTTCGCCAACTGGGTCGGCGGACGCT
CCCGGTCAGCGACCCGCCTCGGCGCGGGGGCGATCCTTGCCGGTCTCGTGGCCGCGCCGCTGTCCGTCGGGCTGCTGGGG
CTCGATGGCCTCGGCGCGACGCTGCGAAACCTGCCCGAGCCGGTGGTGTGGCGGACCGGCTTCTCAACCAGCTACGGTGT
GAGCGCGCAGATCGCGGTGGCGGCTCTTGTCACGGGGCTGGGTGCTTTCGGGCTGAAGGGCATCGCGGGCAAGCTCCTGT
CGCTGGCTGCGCTGCTGCTGGCCGGATGCGCCCTCGCCGCCAGCGGCCATGCCAGCGCGGCGCACCCGCAAGAAGTGACC
CGGCCGGCGGTGTTCCTGCACGCCGTGGGGATCGCGGTCTGGGCCGGCGCCCTCATTCCGCTGGGCAGGGCATTCGCGTC
GCGATCGCCCGAGGCAGCAGCGGTCCTGCGTCGCTTCTCGGTGCTTGCGCCGTTTGCGGTGGTGCCCCTGGCTGCGGCGG
GCCTGCTGCTGGCGGTCATCCAGTTGGGGAGCCTCACGGCGCTCTGGACGACCGCCTATGGCGCGGTGCTGCTGGCGAAG
GTGGCTTTGCTCATGCCGCTGTTTGCCCTGGCGGCCGTCAACCGTGTCAGGCTGACGGCGCCGGCGGAGCGGGGAGAGGC
GACGGCGATCGCGCATCTGCGCCGCTCCATCCGCGCCGAGATTGTCCTCATGTTCGCGATTTTCGCGGTCGCGGCGGTGT
GGCGCTTCACGCCGCCGCCCCGCGTGCTGGCTGCCATCGCAGCTGAGCCGGCCTCGCTGCATATCCACACCGGCGCGGCC
ATGGCGGATCTGTCCATCGCACCGGGCCGCTCAGGTCCCGTCAGCGCGTCCATGGTCATCCTGACCGGGGAGTTCGGCCC
GCTCGACGCCAAGGCGGTGACGCTGGTCCTCGCCAATCCCGCGGCTGGAATCGGGCCGGTGCGGTGGCCGGCGACCAAGC
CCGGAGATGGCACATGGCGCGTGAATGCGCTGGATCTTCCTCATCCGGGCCGCTGGTCCGTCCGCATCGAGATCGTCGGC
CCGGACGACGCCCTGAAGGAACTGGCGGGCGAGATCGAGATCCGCCCCTGA

Upstream 100 bases:

>100_bases
CGAGAAGGCCGGCACCGTCGCGGTGAAATTCAATGTGGACGCCATCGCCGCCGAGGGCAGCGGCCACGACCATTCGCACT
CGGCCAAGTAGTCCATCCGC

Downstream 100 bases:

>100_bases
TTTCGGCGGGGAGGACGCCTGCGCAGCGGGCGCTTCTTGGCGATCAGGCTTGACAGGAACCGCCGATTGTCCGCTGCTGC
AAAGGCACATGGTTTTCCAT

Product: copper resistance D domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 576; Mature: 576

Protein sequence:

>576_residues
MRPSCSGRAGLTGVVAAIVAATRFLPWTSDTRTVATPAVCGRAGIPAGARAILQAVLVMAGALLFAGDALAHASLVHASP
ADGAMVANAPRTFALTFSEPISPLVLRLAGADGTAVTLDRFVQRGATLDVEAPAGLPNGTHVLIWRVVSQDGHPIGGVVA
FSIGAPSPGVSAAAVEVIDWPVRIATWVARLALYAGLFVGVGGAFFANWVGGRSRSATRLGAGAILAGLVAAPLSVGLLG
LDGLGATLRNLPEPVVWRTGFSTSYGVSAQIAVAALVTGLGAFGLKGIAGKLLSLAALLLAGCALAASGHASAAHPQEVT
RPAVFLHAVGIAVWAGALIPLGRAFASRSPEAAAVLRRFSVLAPFAVVPLAAAGLLLAVIQLGSLTALWTTAYGAVLLAK
VALLMPLFALAAVNRVRLTAPAERGEATAIAHLRRSIRAEIVLMFAIFAVAAVWRFTPPPRVLAAIAAEPASLHIHTGAA
MADLSIAPGRSGPVSASMVILTGEFGPLDAKAVTLVLANPAAGIGPVRWPATKPGDGTWRVNALDLPHPGRWSVRIEIVG
PDDALKELAGEIEIRP

Sequences:

>Translated_576_residues
MRPSCSGRAGLTGVVAAIVAATRFLPWTSDTRTVATPAVCGRAGIPAGARAILQAVLVMAGALLFAGDALAHASLVHASP
ADGAMVANAPRTFALTFSEPISPLVLRLAGADGTAVTLDRFVQRGATLDVEAPAGLPNGTHVLIWRVVSQDGHPIGGVVA
FSIGAPSPGVSAAAVEVIDWPVRIATWVARLALYAGLFVGVGGAFFANWVGGRSRSATRLGAGAILAGLVAAPLSVGLLG
LDGLGATLRNLPEPVVWRTGFSTSYGVSAQIAVAALVTGLGAFGLKGIAGKLLSLAALLLAGCALAASGHASAAHPQEVT
RPAVFLHAVGIAVWAGALIPLGRAFASRSPEAAAVLRRFSVLAPFAVVPLAAAGLLLAVIQLGSLTALWTTAYGAVLLAK
VALLMPLFALAAVNRVRLTAPAERGEATAIAHLRRSIRAEIVLMFAIFAVAAVWRFTPPPRVLAAIAAEPASLHIHTGAA
MADLSIAPGRSGPVSASMVILTGEFGPLDAKAVTLVLANPAAGIGPVRWPATKPGDGTWRVNALDLPHPGRWSVRIEIVG
PDDALKELAGEIEIRP
>Mature_576_residues
MRPSCSGRAGLTGVVAAIVAATRFLPWTSDTRTVATPAVCGRAGIPAGARAILQAVLVMAGALLFAGDALAHASLVHASP
ADGAMVANAPRTFALTFSEPISPLVLRLAGADGTAVTLDRFVQRGATLDVEAPAGLPNGTHVLIWRVVSQDGHPIGGVVA
FSIGAPSPGVSAAAVEVIDWPVRIATWVARLALYAGLFVGVGGAFFANWVGGRSRSATRLGAGAILAGLVAAPLSVGLLG
LDGLGATLRNLPEPVVWRTGFSTSYGVSAQIAVAALVTGLGAFGLKGIAGKLLSLAALLLAGCALAASGHASAAHPQEVT
RPAVFLHAVGIAVWAGALIPLGRAFASRSPEAAAVLRRFSVLAPFAVVPLAAAGLLLAVIQLGSLTALWTTAYGAVLLAK
VALLMPLFALAAVNRVRLTAPAERGEATAIAHLRRSIRAEIVLMFAIFAVAAVWRFTPPPRVLAAIAAEPASLHIHTGAA
MADLSIAPGRSGPVSASMVILTGEFGPLDAKAVTLVLANPAAGIGPVRWPATKPGDGTWRVNALDLPHPGRWSVRIEIVG
PDDALKELAGEIEIRP

Specific function: Involved in uptake of extracellular oxidized copper under copper-limiting conditions [H]

COG id: COG1276

COG function: function code P; Putative copper export protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: In the C-terminal section; belongs to the CopD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007348
- InterPro:   IPR008457
- InterPro:   IPR014755
- InterPro:   IPR014756 [H]

Pfam domain/function: PF04234 CopC; PF05425 CopD [H]

EC number: NA

Molecular weight: Translated: 58439; Mature: 58439

Theoretical pI: Translated: 11.22; Mature: 11.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPSCSGRAGLTGVVAAIVAATRFLPWTSDTRTVATPAVCGRAGIPAGARAILQAVLVMA
CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEECCHHHCCCCCCHHHHHHHHHHHHHH
GALLFAGDALAHASLVHASPADGAMVANAPRTFALTFSEPISPLVLRLAGADGTAVTLDR
HHHHHHCHHHHHHHHEECCCCCCCEEECCCCEEEEEECCCCCEEEEEEECCCCCCHHHHH
FVQRGATLDVEAPAGLPNGTHVLIWRVVSQDGHPIGGVVAFSIGAPSPGVSAAAVEVIDW
HHHCCCCEEEECCCCCCCCCEEEEEEEECCCCCCCCCEEEEEECCCCCCCCHHHHHHHHC
PVRIATWVARLALYAGLFVGVGGAFFANWVGGRSRSATRLGAGAILAGLVAAPLSVGLLG
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCEEC
LDGLGATLRNLPEPVVWRTGFSTSYGVSAQIAVAALVTGLGAFGLKGIAGKLLSLAALLL
CCCCCHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGCALAASGHASAAHPQEVTRPAVFLHAVGIAVWAGALIPLGRAFASRSPEAAAVLRRFS
HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
VLAPFAVVPLAAAGLLLAVIQLGSLTALWTTAYGAVLLAKVALLMPLFALAAVNRVRLTA
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEC
PAERGEATAIAHLRRSIRAEIVLMFAIFAVAAVWRFTPPPRVLAAIAAEPASLHIHTGAA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEEEECCCC
MADLSIAPGRSGPVSASMVILTGEFGPLDAKAVTLVLANPAAGIGPVRWPATKPGDGTWR
EEEEEECCCCCCCCCEEEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEE
VNALDLPHPGRWSVRIEIVGPDDALKELAGEIEIRP
EEEECCCCCCCEEEEEEEECCCHHHHHHHCCCCCCC
>Mature Secondary Structure
MRPSCSGRAGLTGVVAAIVAATRFLPWTSDTRTVATPAVCGRAGIPAGARAILQAVLVMA
CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEECCHHHCCCCCCHHHHHHHHHHHHHH
GALLFAGDALAHASLVHASPADGAMVANAPRTFALTFSEPISPLVLRLAGADGTAVTLDR
HHHHHHCHHHHHHHHEECCCCCCCEEECCCCEEEEEECCCCCEEEEEEECCCCCCHHHHH
FVQRGATLDVEAPAGLPNGTHVLIWRVVSQDGHPIGGVVAFSIGAPSPGVSAAAVEVIDW
HHHCCCCEEEECCCCCCCCCEEEEEEEECCCCCCCCCEEEEEECCCCCCCCHHHHHHHHC
PVRIATWVARLALYAGLFVGVGGAFFANWVGGRSRSATRLGAGAILAGLVAAPLSVGLLG
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCEEC
LDGLGATLRNLPEPVVWRTGFSTSYGVSAQIAVAALVTGLGAFGLKGIAGKLLSLAALLL
CCCCCHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGCALAASGHASAAHPQEVTRPAVFLHAVGIAVWAGALIPLGRAFASRSPEAAAVLRRFS
HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
VLAPFAVVPLAAAGLLLAVIQLGSLTALWTTAYGAVLLAKVALLMPLFALAAVNRVRLTA
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEC
PAERGEATAIAHLRRSIRAEIVLMFAIFAVAAVWRFTPPPRVLAAIAAEPASLHIHTGAA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEEEECCCC
MADLSIAPGRSGPVSASMVILTGEFGPLDAKAVTLVLANPAAGIGPVRWPATKPGDGTWR
EEEEEECCCCCCCCCEEEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEE
VNALDLPHPGRWSVRIEIVGPDDALKELAGEIEIRP
EEEECCCCCCCEEEEEEEECCCHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Cu [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]