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The map label for this gene is 154244343

Identifier: 154244343

GI number: 154244343

Start: 410430

End: 412172

Strand: Direct

Name: 154244343

Synonym: Xaut_0386

Alternate gene names: NA

Gene position: 410430-412172 (Clockwise)

Preceding gene: 154244342

Following gene: 154244344

Centisome position: 7.73

GC content: 70.22

Gene sequence:

>1743_bases
ATGCTGGGGCGAAAGGGTCTCTTCGTGCTCGCGGGCGTCGCGGGCTTTCTGGGCCTTGCGGCGGCCACCGACGCGATCAT
GTCGCGGCGGCAGGCGGTGGAGCAGGCCGGGCCGCCAAAGGTGCTCGACCAGGGCTGGTCGGACAGCCTGCGCGAGCAGT
TCTACTATACCTCGCAGGGCTCGCAGTTGTTGCCCTATGCATTCCTGCGGGCGCTGGAGCAGCCGCTCTCCGACAAGCCC
TTCCTGGACCCGGCGCACATCGCCGAGATGGGCTTCCTGCCGGCGGACGGGCCCTCGCAGCTTAATCCGGACGGCCTGCC
CATCGGCTTCGTAAAGGACCCACGGCCCGGCAACAGCACCATGGGCCCCAGCGTGGGCATGACCTGCGCCGCCTGCCATA
CCTCCGATATCGAGGCCAACGGCGTGCGCATCCGCATCGACGGCGGCGCCGCCCTGGCCGACTACCAGCTGTTCATGAAG
CGGCTGAGCCGCGCCCTCGACAACACCTTGGCCGATCCCGCCAAATACCAGCGCTTCGCCGCGCGCCTCGTGGCCGCCGA
TCCCAAGCAGATCCGCCCGGCGCTGGAGGCCACCGCCGCCGAGATCCGCCGGCTGGAGGCCGCCTCCTGGACCCCGGTGC
CCTACGGCCGCGGCCGGCTCGACGCGTTCGGCCATATCCTCAACGCGGTCGCCGCCGACGCTTTGGGCGAGCCCGCCAAC
TTCCGCATGCCGGACGCGCCGGTGAGCTATCCCTTCCTGTGGACCACCCCGGCCCAGCGCTACGTGCAGTGGAATGGGGT
GGCCGGCAATCCGCTCGGGCGCAATCTGGGCGAAGTGCTGGGCGTGTTCGGCCACACCAGCTTCGCCAACGGCAATCCCG
GCGCCTTCGCCTCCACCGCGCTGCCCGACAATCTGGTGGCGCTGGAAGCCTGGGTGGCGGACCTGAAGCCGCCGCCGTGG
CCGGAAAAGGAGCTGGGCAAGGCGGACGCGGCCAAGGCGAAGCGCGGCGCCGAGCTGTTCAAGGCCCATTGCGCCGGCTG
CCACGGCGGCCCCGAGTATCGCCTCACCCCCGCTTCCGAGAACGAGGGCGGGCGGCAGTGGCTGGCGGTCTCCATGGTGG
ACATCGCCAAGGTGAAGACCGATCCCAAGATGCTCAACAATTTCACCGGTCGCTTCGCCAAGCCCGGCGTGCTCGGCCCG
CTCGTGGCCAACGCGCCGCACCTGTCCGACGGGCAGGTGCCGGCCGGCGCCGTGCTGCTGGCGGCGGTGACCGTCATCAC
CGAGAACAGCCTGCGCGCCCAGGGCATCACCGGCGATGCGCGCAAGCAATGGTACGGCTGGCGCTTCGCCCCCGGCAGCA
CCACGCCCCAGTCCGGCTGGCTGGCGCCCCCGAGCTACAAGGCCGGCCCGCTGGCCGGGGTATGGGCGACGGGGCCATTC
CTGCACAACGGCTCGGTGCCCACCGTCTACGACCTGCTCTCGCCCGAGGACGAGCGGCCCGCCCGCTTCTACGTGGGCTC
GCGGCAGCTCGACACGGAAAAGCTCGGCTTCGTCTCCTCGCCCGATTCTCTGCCCGAGAAGGAACGCGAGGGGCTGTTCC
TGTTCGACACCACCCTCGCCGGCAATTCCAACCGGGGCCACGCCTTCCCCGACCCCTCGGTGGCGAAGCTCTCGCCGGAC
GATCGCTACGCCATCATCGAATATCTCAAGATCCTGGAGGGGCCGGATGTCCGCCGCCACTGA

Upstream 100 bases:

>100_bases
CTGCGCCGGCCGGGCCGAAGCTTCACGGGGGTGAAGCACCTGCTTCGGGCCGGCGCATGTGCGGGCGCGTTGCCACCCGT
ACCAGGCTTTGGGGGAGAAA

Downstream 100 bases:

>100_bases
GGGGCCCGCCACGGGCTGCAACGGGACGGCCTCGCCGACGCCCCTGCTCGACCGCCTCGCGGCGCTGCGGCCGGCCGAGC
GCTGGCCACTCGCCCGCGAC

Product: pseudouridine synthase, RluD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 580; Mature: 580

Protein sequence:

>580_residues
MLGRKGLFVLAGVAGFLGLAAATDAIMSRRQAVEQAGPPKVLDQGWSDSLREQFYYTSQGSQLLPYAFLRALEQPLSDKP
FLDPAHIAEMGFLPADGPSQLNPDGLPIGFVKDPRPGNSTMGPSVGMTCAACHTSDIEANGVRIRIDGGAALADYQLFMK
RLSRALDNTLADPAKYQRFAARLVAADPKQIRPALEATAAEIRRLEAASWTPVPYGRGRLDAFGHILNAVAADALGEPAN
FRMPDAPVSYPFLWTTPAQRYVQWNGVAGNPLGRNLGEVLGVFGHTSFANGNPGAFASTALPDNLVALEAWVADLKPPPW
PEKELGKADAAKAKRGAELFKAHCAGCHGGPEYRLTPASENEGGRQWLAVSMVDIAKVKTDPKMLNNFTGRFAKPGVLGP
LVANAPHLSDGQVPAGAVLLAAVTVITENSLRAQGITGDARKQWYGWRFAPGSTTPQSGWLAPPSYKAGPLAGVWATGPF
LHNGSVPTVYDLLSPEDERPARFYVGSRQLDTEKLGFVSSPDSLPEKEREGLFLFDTTLAGNSNRGHAFPDPSVAKLSPD
DRYAIIEYLKILEGPDVRRH

Sequences:

>Translated_580_residues
MLGRKGLFVLAGVAGFLGLAAATDAIMSRRQAVEQAGPPKVLDQGWSDSLREQFYYTSQGSQLLPYAFLRALEQPLSDKP
FLDPAHIAEMGFLPADGPSQLNPDGLPIGFVKDPRPGNSTMGPSVGMTCAACHTSDIEANGVRIRIDGGAALADYQLFMK
RLSRALDNTLADPAKYQRFAARLVAADPKQIRPALEATAAEIRRLEAASWTPVPYGRGRLDAFGHILNAVAADALGEPAN
FRMPDAPVSYPFLWTTPAQRYVQWNGVAGNPLGRNLGEVLGVFGHTSFANGNPGAFASTALPDNLVALEAWVADLKPPPW
PEKELGKADAAKAKRGAELFKAHCAGCHGGPEYRLTPASENEGGRQWLAVSMVDIAKVKTDPKMLNNFTGRFAKPGVLGP
LVANAPHLSDGQVPAGAVLLAAVTVITENSLRAQGITGDARKQWYGWRFAPGSTTPQSGWLAPPSYKAGPLAGVWATGPF
LHNGSVPTVYDLLSPEDERPARFYVGSRQLDTEKLGFVSSPDSLPEKEREGLFLFDTTLAGNSNRGHAFPDPSVAKLSPD
DRYAIIEYLKILEGPDVRRH
>Mature_580_residues
MLGRKGLFVLAGVAGFLGLAAATDAIMSRRQAVEQAGPPKVLDQGWSDSLREQFYYTSQGSQLLPYAFLRALEQPLSDKP
FLDPAHIAEMGFLPADGPSQLNPDGLPIGFVKDPRPGNSTMGPSVGMTCAACHTSDIEANGVRIRIDGGAALADYQLFMK
RLSRALDNTLADPAKYQRFAARLVAADPKQIRPALEATAAEIRRLEAASWTPVPYGRGRLDAFGHILNAVAADALGEPAN
FRMPDAPVSYPFLWTTPAQRYVQWNGVAGNPLGRNLGEVLGVFGHTSFANGNPGAFASTALPDNLVALEAWVADLKPPPW
PEKELGKADAAKAKRGAELFKAHCAGCHGGPEYRLTPASENEGGRQWLAVSMVDIAKVKTDPKMLNNFTGRFAKPGVLGP
LVANAPHLSDGQVPAGAVLLAAVTVITENSLRAQGITGDARKQWYGWRFAPGSTTPQSGWLAPPSYKAGPLAGVWATGPF
LHNGSVPTVYDLLSPEDERPARFYVGSRQLDTEKLGFVSSPDSLPEKEREGLFLFDTTLAGNSNRGHAFPDPSVAKLSPD
DRYAIIEYLKILEGPDVRRH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 62205; Mature: 62205

Theoretical pI: Translated: 7.32; Mature: 7.32

Prosite motif: PS51007 CYTC L=RR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGRKGLFVLAGVAGFLGLAAATDAIMSRRQAVEQAGPPKVLDQGWSDSLREQFYYTSQG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHEEECCCC
SQLLPYAFLRALEQPLSDKPFLDPAHIAEMGFLPADGPSQLNPDGLPIGFVKDPRPGNST
CCCHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCC
MGPSVGMTCAACHTSDIEANGVRIRIDGGAALADYQLFMKRLSRALDNTLADPAKYQRFA
CCCCCCCEEEECCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
ARLVAADPKQIRPALEATAAEIRRLEAASWTPVPYGRGRLDAFGHILNAVAADALGEPAN
HHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCC
FRMPDAPVSYPFLWTTPAQRYVQWNGVAGNPLGRNLGEVLGVFGHTSFANGNPGAFASTA
CCCCCCCCCCCEEEECCHHHEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
LPDNLVALEAWVADLKPPPWPEKELGKADAAKAKRGAELFKAHCAGCHGGPEYRLTPASE
CCCCHHHHHHHHHHCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCC
NEGGRQWLAVSMVDIAKVKTDPKMLNNFTGRFAKPGVLGPLVANAPHLSDGQVPAGAVLL
CCCCCEEEEEEHHHHHHHCCCHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCCCCHHHHHH
AAVTVITENSLRAQGITGDARKQWYGWRFAPGSTTPQSGWLAPPSYKAGPLAGVWATGPF
HHHHHHHCCCCEECCCCCHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCCCEEEECCCE
LHNGSVPTVYDLLSPEDERPARFYVGSRQLDTEKLGFVSSPDSLPEKEREGLFLFDTTLA
EECCCCCHHHHHCCCCCCCCCEEEECCCCCCHHHCCCCCCCCCCCHHHHCCEEEEEEEEC
GNSNRGHAFPDPSVAKLSPDDRYAIIEYLKILEGPDVRRH
CCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MLGRKGLFVLAGVAGFLGLAAATDAIMSRRQAVEQAGPPKVLDQGWSDSLREQFYYTSQG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHEEECCCC
SQLLPYAFLRALEQPLSDKPFLDPAHIAEMGFLPADGPSQLNPDGLPIGFVKDPRPGNST
CCCHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCC
MGPSVGMTCAACHTSDIEANGVRIRIDGGAALADYQLFMKRLSRALDNTLADPAKYQRFA
CCCCCCCEEEECCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
ARLVAADPKQIRPALEATAAEIRRLEAASWTPVPYGRGRLDAFGHILNAVAADALGEPAN
HHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCC
FRMPDAPVSYPFLWTTPAQRYVQWNGVAGNPLGRNLGEVLGVFGHTSFANGNPGAFASTA
CCCCCCCCCCCEEEECCHHHEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
LPDNLVALEAWVADLKPPPWPEKELGKADAAKAKRGAELFKAHCAGCHGGPEYRLTPASE
CCCCHHHHHHHHHHCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCC
NEGGRQWLAVSMVDIAKVKTDPKMLNNFTGRFAKPGVLGPLVANAPHLSDGQVPAGAVLL
CCCCCEEEEEEHHHHHHHCCCHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCCCCHHHHHH
AAVTVITENSLRAQGITGDARKQWYGWRFAPGSTTPQSGWLAPPSYKAGPLAGVWATGPF
HHHHHHHCCCCEECCCCCHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCCCEEEECCCE
LHNGSVPTVYDLLSPEDERPARFYVGSRQLDTEKLGFVSSPDSLPEKEREGLFLFDTTLA
EECCCCCHHHHHCCCCCCCCCEEEECCCCCCHHHCCCCCCCCCCCHHHHCCEEEEEEEEC
GNSNRGHAFPDPSVAKLSPDDRYAIIEYLKILEGPDVRRH
CCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]