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The map label for this gene is 154244325

Identifier: 154244325

GI number: 154244325

Start: 383547

End: 384719

Strand: Reverse

Name: 154244325

Synonym: Xaut_0368

Alternate gene names: NA

Gene position: 384719-383547 (Counterclockwise)

Preceding gene: 154244326

Following gene: 154244323

Centisome position: 7.25

GC content: 70.84

Gene sequence:

>1173_bases
ATGATGCCCACTGACCATGCGGGAGGATCAACCGGCGCCATGTGGCTTGACGATCTGCGCCCCCTTCAATTCGGGGCAGC
CACCGAAAGCGAGCGCCTGAACGAAGCCGCCTACCAGGCCTTCGGCATCGCGCAGCCCGGCGCGGGCATGGTGGATGTGG
TGGGGGCCCGCCTGCCGTTCGGCCAGATGCGGATGTTCTCGCGCAGCCCACAGCCGCGCCGCCGGGTGCTGGTGGTGGCG
CCCATGGCCGGGGCCTATCCCTTCCTCATGCGCGATCTGGTGATGGCGCTGCTCGGCGTCGCCGACGCGGTGGCGGTCAC
CGAATGGCCCAATGCCCGCTATGTGCCGGTCTCGGCCGGGCGCTTCGGCTTTGCCGAGAATTGCATGGAGACCGCCCAGA
TGGCGCGCGCGCTGGCCGGCGACGCTCGGGCTGGCGAGGAAGGCGGCATCCACATCGTCGGGGTGTGCCAGGGGGCGCTG
CCGGCCTTCGCCGCCGCCTGCCTCCTCGCCGAGGCCGGCGCAGCGCCGGCAAGCCTCAGCCTGATCGGCGGCCCCATCGA
TCCCTCGCGCAACCCCACCCGCCTGTGGCGCGTGCTGCAGGAGCGCTCGCTGGAGGCGCTGGAGCGGCAGGTGATCGAGA
CCGTCTCCTCCGCCTTTCCCGGCGCCGGGCGACGCATCTTCCCCGCCTGGCGGCAGATCGACGCCTTCGCCCTCTATCTG
TGGCGCCAGAGCCTTTCGGGGGGCGACCTGCCGTTCCGCCTCGCCTTCGACGACGGCGAAGACCCCGTGCGCTTTCCCCT
CGCCCGGCTGTGCTGGAGCATGATGGACGTGGCGGGGGAGTTCTTCATGGAGAATGTGGAAACCGTGTTCCGTGAGAACG
CCCTGGCCCGCGACCGCCTCACCGTCGCCGGGCATGCGGTGCGGGCGCAGGCCCTCTCCACCACCGCCCTCCTCACCGTG
GAAGGGGAAGTGGACGACATCTCGGCCCGGACCCAGACCGAAGCCGCCCACGACCTGTGCGTGAACATTCCCGCCCACCT
GAAGCGGCAGGTCGTGGTGCCCAATGCGGGACATTTCGCGCTGTTCTACGGCCGCCGCATGCGCGAAACGGTGCTGCCCG
CCCTCGCTGAGGTGATGCAGGCCGCCGAGAGTGCCGTCCGGCCCGCGGCCTGA

Upstream 100 bases:

>100_bases
TCGCTCTGAACGATTGAATTGACCCCTCGTCCCGCGCACCGGGGTAAGGAGTTTTCGCCTGTCCCGTCAGGGGCATGGCG
CGGCGGGGACAACTGGCTCT

Downstream 100 bases:

>100_bases
CGGGCTGAGGTCTCAATGCCCGCCGCGGGAGCCGCGGCTGGCGAGATGGCGATGCAGGGTGCTGCGGTGGATGCCGAGCC
GGCGCGCCGCCTGCGAGACA

Product: PHB de-polymerase domain-containing protein

Products: NA

Alternate protein names: Intracellular PHB Depolymerase; Polyhydroxyalkanoate Depolymerase; Poly-Beta-Hydroxyalkanoate Depolymerase; PHB Depolymerase; Poly[D(-)-3-Hydroxybutyrate] Depolymerase; Intracellular Poly(3-Hydroxybutyrate) Depolymerase; Intracellular Polyhydroxyalkanoate Depolymerase; Polyhydroxyalkanoate Depolymerase Intracellular Subfamily; Poly(3-Hydroxyalkanoate) Depolymerase; PHB De-Polymerase Domain-Containing Protein; Poly(3-Hydroxybutyrate) Depolymerase; Intracellular PHB Depolymerase Protein; Poly-Beta-Hydroxyalkanoate Depolymerase-Like Protein; Intracellular Poly[D(-)-3-Hydroxybutyrate] Depolymerase; Poly[D(-)-3-Hydroxybutyrate](Phb) Depolymerase; Poly-Beta-Hydroxyalkanoate/Butyrate Depolymerase; Poly-Beta-Hydroxyalkanoate Depolymerase Protein; Poly[D(-)-3-Hydroxyalkanoate] Depolymerase; Polyhydroxybutanoate Depolymerase; Poly-Beta-Hydroxybutyrate Depolymerase

Number of amino acids: Translated: 390; Mature: 390

Protein sequence:

>390_residues
MMPTDHAGGSTGAMWLDDLRPLQFGAATESERLNEAAYQAFGIAQPGAGMVDVVGARLPFGQMRMFSRSPQPRRRVLVVA
PMAGAYPFLMRDLVMALLGVADAVAVTEWPNARYVPVSAGRFGFAENCMETAQMARALAGDARAGEEGGIHIVGVCQGAL
PAFAAACLLAEAGAAPASLSLIGGPIDPSRNPTRLWRVLQERSLEALERQVIETVSSAFPGAGRRIFPAWRQIDAFALYL
WRQSLSGGDLPFRLAFDDGEDPVRFPLARLCWSMMDVAGEFFMENVETVFRENALARDRLTVAGHAVRAQALSTTALLTV
EGEVDDISARTQTEAAHDLCVNIPAHLKRQVVVPNAGHFALFYGRRMRETVLPALAEVMQAAESAVRPAA

Sequences:

>Translated_390_residues
MMPTDHAGGSTGAMWLDDLRPLQFGAATESERLNEAAYQAFGIAQPGAGMVDVVGARLPFGQMRMFSRSPQPRRRVLVVA
PMAGAYPFLMRDLVMALLGVADAVAVTEWPNARYVPVSAGRFGFAENCMETAQMARALAGDARAGEEGGIHIVGVCQGAL
PAFAAACLLAEAGAAPASLSLIGGPIDPSRNPTRLWRVLQERSLEALERQVIETVSSAFPGAGRRIFPAWRQIDAFALYL
WRQSLSGGDLPFRLAFDDGEDPVRFPLARLCWSMMDVAGEFFMENVETVFRENALARDRLTVAGHAVRAQALSTTALLTV
EGEVDDISARTQTEAAHDLCVNIPAHLKRQVVVPNAGHFALFYGRRMRETVLPALAEVMQAAESAVRPAA
>Mature_390_residues
MMPTDHAGGSTGAMWLDDLRPLQFGAATESERLNEAAYQAFGIAQPGAGMVDVVGARLPFGQMRMFSRSPQPRRRVLVVA
PMAGAYPFLMRDLVMALLGVADAVAVTEWPNARYVPVSAGRFGFAENCMETAQMARALAGDARAGEEGGIHIVGVCQGAL
PAFAAACLLAEAGAAPASLSLIGGPIDPSRNPTRLWRVLQERSLEALERQVIETVSSAFPGAGRRIFPAWRQIDAFALYL
WRQSLSGGDLPFRLAFDDGEDPVRFPLARLCWSMMDVAGEFFMENVETVFRENALARDRLTVAGHAVRAQALSTTALLTV
EGEVDDISARTQTEAAHDLCVNIPAHLKRQVVVPNAGHFALFYGRRMRETVLPALAEVMQAAESAVRPAA

Specific function: Unknown

COG id: COG4553

COG function: function code I; Poly-beta-hydroxyalkanoate depolymerase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42050; Mature: 42050

Theoretical pI: Translated: 5.71; Mature: 5.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMPTDHAGGSTGAMWLDDLRPLQFGAATESERLNEAAYQAFGIAQPGAGMVDVVGARLPF
CCCCCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCH
GQMRMFSRSPQPRRRVLVVAPMAGAYPFLMRDLVMALLGVADAVAVTEWPNARYVPVSAG
HHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHEECCCCCEEEECCCC
RFGFAENCMETAQMARALAGDARAGEEGGIHIVGVCQGALPAFAAACLLAEAGAAPASLS
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCEEE
LIGGPIDPSRNPTRLWRVLQERSLEALERQVIETVSSAFPGAGRRIFPAWRQIDAFALYL
EECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
WRQSLSGGDLPFRLAFDDGEDPVRFPLARLCWSMMDVAGEFFMENVETVFRENALARDRL
HHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
TVAGHAVRAQALSTTALLTVEGEVDDISARTQTEAAHDLCVNIPAHLKRQVVVPNAGHFA
HHHHHHHHHHHHCEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCHHHCCEEECCCCCCEE
LFYGRRMRETVLPALAEVMQAAESAVRPAA
EHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MMPTDHAGGSTGAMWLDDLRPLQFGAATESERLNEAAYQAFGIAQPGAGMVDVVGARLPF
CCCCCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCH
GQMRMFSRSPQPRRRVLVVAPMAGAYPFLMRDLVMALLGVADAVAVTEWPNARYVPVSAG
HHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHEECCCCCEEEECCCC
RFGFAENCMETAQMARALAGDARAGEEGGIHIVGVCQGALPAFAAACLLAEAGAAPASLS
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCEEE
LIGGPIDPSRNPTRLWRVLQERSLEALERQVIETVSSAFPGAGRRIFPAWRQIDAFALYL
EECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
WRQSLSGGDLPFRLAFDDGEDPVRFPLARLCWSMMDVAGEFFMENVETVFRENALARDRL
HHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
TVAGHAVRAQALSTTALLTVEGEVDDISARTQTEAAHDLCVNIPAHLKRQVVVPNAGHFA
HHHHHHHHHHHHCEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCHHHCCEEECCCCCCEE
LFYGRRMRETVLPALAEVMQAAESAVRPAA
EHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA