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The map label for this gene is yaeJ [C]

Identifier: 154244289

GI number: 154244289

Start: 345279

End: 345701

Strand: Reverse

Name: yaeJ [C]

Synonym: Xaut_0332

Alternate gene names: 154244289

Gene position: 345701-345279 (Counterclockwise)

Preceding gene: 154244290

Following gene: 154244280

Centisome position: 6.51

GC content: 68.56

Gene sequence:

>423_bases
ATGATCGAAATCACTCCCCGCATCGCCATCTCGGAGGACGAGATCGAGCTCGCCTTCGTGCGCGCCTCGGGGCCGGGTGG
GCAGAATGTGAACAAGGTGTCGAGCGCGGTGCAGTTGCGCTTCGATGCCGCCCACTCGCCCAACCTGCCCGAGGGAGTGA
AGCACCGCCTGGTCCGGCTGGCCGGAAAGCGGATGACCCAGGGCGGCGTCATCATCATTCAGGCGCAGCGCTTCCGCACC
CAGGAACGCAACCGCGAGGATGCCGTTGCGCGGCTGGTCGAGCTCATCCGCAGCGCGACCATCGTGGCGCCGATCCGCCG
GCCCACCCGGCCCACACTGGGCTCCAAGGAACGACGCCTCGCGGCCAAGGAGCGGCGCGGCGAAGTCAAATCCCTGCGCC
GCGACAAGCCGCAGGCGGACTGA

Upstream 100 bases:

>100_bases
CATGGCGCCGGCGCTGGCGGGCTGAGCACCGTTGGCGGACGGAAGGCCGAATGCGGCCCAGCGAGCCCTCGCGGTCGCGC
CCGACGCCGAAGGTTCTGCC

Downstream 100 bases:

>100_bases
TTCGGGACGTCCCGGCGGTCGCGAAAGGGCCACACCACGCGATCCGCTGCCCATAAATTCAAAGCACGGATCCGGCGTCC
GAGCGCCTCTACCGTGCGGC

Product: class I peptide chain release factor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 140; Mature: 140

Protein sequence:

>140_residues
MIEITPRIAISEDEIELAFVRASGPGGQNVNKVSSAVQLRFDAAHSPNLPEGVKHRLVRLAGKRMTQGGVIIIQAQRFRT
QERNREDAVARLVELIRSATIVAPIRRPTRPTLGSKERRLAAKERRGEVKSLRRDKPQAD

Sequences:

>Translated_140_residues
MIEITPRIAISEDEIELAFVRASGPGGQNVNKVSSAVQLRFDAAHSPNLPEGVKHRLVRLAGKRMTQGGVIIIQAQRFRT
QERNREDAVARLVELIRSATIVAPIRRPTRPTLGSKERRLAAKERRGEVKSLRRDKPQAD
>Mature_140_residues
MIEITPRIAISEDEIELAFVRASGPGGQNVNKVSSAVQLRFDAAHSPNLPEGVKHRLVRLAGKRMTQGGVIIIQAQRFRT
QERNREDAVARLVELIRSATIVAPIRRPTRPTLGSKERRLAAKERRGEVKSLRRDKPQAD

Specific function: Unknown

COG id: COG1186

COG function: function code J; Protein chain release factor B

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the prokaryotic/mitochondrial release factor family [H]

Homologues:

Organism=Escherichia coli, GI1786389, Length=133, Percent_Identity=48.8721804511278, Blast_Score=124, Evalue=2e-30,
Organism=Drosophila melanogaster, GI19921098, Length=133, Percent_Identity=35.3383458646617, Blast_Score=77, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000352 [H]

Pfam domain/function: PF00472 RF-1 [H]

EC number: NA

Molecular weight: Translated: 15649; Mature: 15649

Theoretical pI: Translated: 11.93; Mature: 11.93

Prosite motif: PS00745 RF_PROK_I

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEITPRIAISEDEIELAFVRASGPGGQNVNKVSSAVQLRFDAAHSPNLPEGVKHRLVRL
CEECCCCEEECCCCEEEEEEEECCCCCCCHHHHHHHHHHEECCCCCCCCCHHHHHHHHHH
AGKRMTQGGVIIIQAQRFRTQERNREDAVARLVELIRSATIVAPIRRPTRPTLGSKERRL
HHCCCCCCCEEEEEHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHH
AAKERRGEVKSLRRDKPQAD
HHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MIEITPRIAISEDEIELAFVRASGPGGQNVNKVSSAVQLRFDAAHSPNLPEGVKHRLVRL
CEECCCCEEECCCCEEEEEEEECCCCCCCHHHHHHHHHHEECCCCCCCCCHHHHHHHHHH
AGKRMTQGGVIIIQAQRFRTQERNREDAVARLVELIRSATIVAPIRRPTRPTLGSKERRL
HHCCCCCCCEEEEEHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHH
AAKERRGEVKSLRRDKPQAD
HHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1624453 [H]