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The map label for this gene is ytfH [H]

Identifier: 154244270

GI number: 154244270

Start: 321231

End: 321596

Strand: Direct

Name: ytfH [H]

Synonym: Xaut_0313

Alternate gene names: 154244270

Gene position: 321231-321596 (Clockwise)

Preceding gene: 154244268

Following gene: 154244273

Centisome position: 6.05

GC content: 65.3

Gene sequence:

>366_bases
ATGGATCAGCCCTATGATGTCTATCAGGATCGCTGCCCCACCCGCATGGTTCTGGACCGGCTGGCGGACAAATGGGCGCT
GCTGATCCTCGACCGGCTGCGGGATGGCCCGGTGCGGTTCAACCATCTGCGGCGCGACATTGCCGGCATCTCGCAGAAGG
TGCTGTCGCAGACCTTGAAGAAGCTGGAGCGGGACGGCCTCATCTCGCGGCAGGTGTTCCCCACCGTGCCGGTGACGGTG
GAATATGCCCTCACCGGCCTCGGCCGCACCCTCACCGACACCGTCGCAGCGCTCGCCCACTGGGCCGAGGCCAACATGGA
TGCCGTGCTCGCAGCCCAGAAGGCCTATGATTCCATCGTGCGGTGA

Upstream 100 bases:

>100_bases
TATCGGGGAGATACATACAAGCCTTGCCGGCGGCCCGGAAGAGAGCACCTGAAGCTCACATGGTCACCGCTGGGAAACCG
GCCACCGGGTGGGAGGGACC

Downstream 100 bases:

>100_bases
GGGGACAGCGGGACGGCGCTAGTCCGCCTCCTCTTCCGGCCCCGGCACATATTCCAGGATATCCCCCGGCTGGCAGCCGA
GGATCTCGCAGATGCGCGCC

Product: HxlR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 121; Mature: 121

Protein sequence:

>121_residues
MDQPYDVYQDRCPTRMVLDRLADKWALLILDRLRDGPVRFNHLRRDIAGISQKVLSQTLKKLERDGLISRQVFPTVPVTV
EYALTGLGRTLTDTVAALAHWAEANMDAVLAAQKAYDSIVR

Sequences:

>Translated_121_residues
MDQPYDVYQDRCPTRMVLDRLADKWALLILDRLRDGPVRFNHLRRDIAGISQKVLSQTLKKLERDGLISRQVFPTVPVTV
EYALTGLGRTLTDTVAALAHWAEANMDAVLAAQKAYDSIVR
>Mature_121_residues
MDQPYDVYQDRCPTRMVLDRLADKWALLILDRLRDGPVRFNHLRRDIAGISQKVLSQTLKKLERDGLISRQVFPTVPVTV
EYALTGLGRTLTDTVAALAHWAEANMDAVLAAQKAYDSIVR

Specific function: Unknown

COG id: COG1733

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH hxlR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082391, Length=106, Percent_Identity=47.1698113207547, Blast_Score=112, Evalue=1e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002577
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01638 DUF24 [H]

EC number: NA

Molecular weight: Translated: 13708; Mature: 13708

Theoretical pI: Translated: 9.09; Mature: 9.09

Prosite motif: PS51118 HTH_HXLR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDQPYDVYQDRCPTRMVLDRLADKWALLILDRLRDGPVRFNHLRRDIAGISQKVLSQTLK
CCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
KLERDGLISRQVFPTVPVTVEYALTGLGRTLTDTVAALAHWAEANMDAVLAAQKAYDSIV
HHHHCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHC
R
C
>Mature Secondary Structure
MDQPYDVYQDRCPTRMVLDRLADKWALLILDRLRDGPVRFNHLRRDIAGISQKVLSQTLK
CCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
KLERDGLISRQVFPTVPVTVEYALTGLGRTLTDTVAALAHWAEANMDAVLAAQKAYDSIV
HHHHCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHC
R
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]