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The map label for this gene is 154244200

Identifier: 154244200

GI number: 154244200

Start: 251703

End: 253106

Strand: Direct

Name: 154244200

Synonym: Xaut_0243

Alternate gene names: NA

Gene position: 251703-253106 (Clockwise)

Preceding gene: 154244199

Following gene: 154244201

Centisome position: 4.74

GC content: 66.81

Gene sequence:

>1404_bases
ATGGCCAAGACGCTGATGACCCAGCCCGTAAAGCGCATCCTCGGCACCGGCTTCGACGGCAAGCCGATCTTCGCCCCGCG
CCACTCCCATGCCTTGCTGCTCGCTGCGGCCGGCGGCGGCAAGACCACCTGCGGCGCCGTCCCCTGGCTCCAGTCCCTCG
TGGCCGACACCGATACCGGCCGCGCCCTCGTCATCACCGATTCCAAGGAAGGCGAGATCGCCGCCCAGTGCGCCGACATG
TGCGCCAAGGCCGGACGCACCGTCGCCATCATCGATGGCTTCGGCGTGCTCGACGCCCATTGGGGCGGGACCAATCCCTA
CACCGTCTCCCTCAACCCCATGGGGGCGGTGGTCTCCTCCTTCGTGAAGGCCAACGGCGAGCTCATCTTCTCCACCGAGA
ACGCCAACCAGGCCCTCATCGAGGAGCCGCCCCGGGACCAGCGCAATACCTATTGGCGGGACGAACCCCGCACGCTCGGA
GAGTTCTGCACTTGCGTGTTGCTCAAGCGCAATCCCAGGCTCGCCACCCCCGGCGGGGTCTGGTCCATCCTGTCCGATCC
CAAGCTCCTGCTCGATATGGCGCAGGTGGAAGCGGAAGAGGGCGACGACTATCTGCGCGCCCTCGCGCTCCATGTGCTCG
GCATGGCCCGCAACGAGGAGCACTTCCCCCAGCACCGGGCCGCGGCGTTGAAGGCCCTGCGCGTCTATGCGGCGAGCTCG
CCGCTGCACCGGGCGGGCGTCGGCGCCACCCGCACCCATGAGGACCTGATCCGCCAGAAAGCGGTGATCTTCCTGGTCGG
CCCGGTGCGCCACATGGAGCGGCTCGGCGCCGACTACGCCCTGCATTTGCAGTCCTTCATGGAGGTGGTGCTCAGCGGCA
GGGCACCGCCCGTCACCTTCATCCTCGACGAGTTCACCAACGCGCCGCTGAAAGCTCTCGTCTCCCAGCTCACCACCATG
CGCGGCTACGGAGGAAACTGCCTCATGATCGCCCAGTCGAGATCCGAGATCCAGCGCCGGTACGGCGACAAGGAAACCCT
CACCATCGAGGAGAATGCCGTCGTCAAGCAATGGTTCGGCTTCTCCTCCTTCGAGGAGGCCGAGCGGGTGTCCCACGCCA
TCGGCGAGGCGCTGGCGGTGTCCCGCGCCCTCGGCATCCAAAGCGGCCAGTTCGGCGTCTCCAGCAACTATTCCACCGCC
AAGGAACGCCTGTTCACAGCGGAGGAGTTGATGCGCCTGCCCCCGGACGAGCAGGTCATCCATGTGAAGGACGTGGGCTT
CATCCATTGCCGCAAGATCCGCCAGAACGAGATCGCCCCGTACTGCTTCGATCTCGCCCCCAACCCGCTGGAAGGCGGGC
TGCTGGCGCCTGATCCCAAGGTGTGGCTGGAGGGCGGGCGATGA

Upstream 100 bases:

>100_bases
AGCGCGAGCGGATAATCGAGGCCTATCTGGCCCTCGGCGGCGCGGCAAAATCCTCCGAGATGGCGAGCGATGCCCGCCTG
CGCGACGCGGGGATGCGCTG

Downstream 100 bases:

>100_bases
GACGGGCCTGGCTGCTGCGCGCGAGCTACTTCATCTGGGTCATCATCCCTGCGGGGCTCTACCTGCTGCTCCAGACGGCA
GGGACGCCCCACGTCATCTG

Product: Type IV secretory pathway VirD4 protein-like protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 467; Mature: 466

Protein sequence:

>467_residues
MAKTLMTQPVKRILGTGFDGKPIFAPRHSHALLLAAAGGGKTTCGAVPWLQSLVADTDTGRALVITDSKEGEIAAQCADM
CAKAGRTVAIIDGFGVLDAHWGGTNPYTVSLNPMGAVVSSFVKANGELIFSTENANQALIEEPPRDQRNTYWRDEPRTLG
EFCTCVLLKRNPRLATPGGVWSILSDPKLLLDMAQVEAEEGDDYLRALALHVLGMARNEEHFPQHRAAALKALRVYAASS
PLHRAGVGATRTHEDLIRQKAVIFLVGPVRHMERLGADYALHLQSFMEVVLSGRAPPVTFILDEFTNAPLKALVSQLTTM
RGYGGNCLMIAQSRSEIQRRYGDKETLTIEENAVVKQWFGFSSFEEAERVSHAIGEALAVSRALGIQSGQFGVSSNYSTA
KERLFTAEELMRLPPDEQVIHVKDVGFIHCRKIRQNEIAPYCFDLAPNPLEGGLLAPDPKVWLEGGR

Sequences:

>Translated_467_residues
MAKTLMTQPVKRILGTGFDGKPIFAPRHSHALLLAAAGGGKTTCGAVPWLQSLVADTDTGRALVITDSKEGEIAAQCADM
CAKAGRTVAIIDGFGVLDAHWGGTNPYTVSLNPMGAVVSSFVKANGELIFSTENANQALIEEPPRDQRNTYWRDEPRTLG
EFCTCVLLKRNPRLATPGGVWSILSDPKLLLDMAQVEAEEGDDYLRALALHVLGMARNEEHFPQHRAAALKALRVYAASS
PLHRAGVGATRTHEDLIRQKAVIFLVGPVRHMERLGADYALHLQSFMEVVLSGRAPPVTFILDEFTNAPLKALVSQLTTM
RGYGGNCLMIAQSRSEIQRRYGDKETLTIEENAVVKQWFGFSSFEEAERVSHAIGEALAVSRALGIQSGQFGVSSNYSTA
KERLFTAEELMRLPPDEQVIHVKDVGFIHCRKIRQNEIAPYCFDLAPNPLEGGLLAPDPKVWLEGGR
>Mature_466_residues
AKTLMTQPVKRILGTGFDGKPIFAPRHSHALLLAAAGGGKTTCGAVPWLQSLVADTDTGRALVITDSKEGEIAAQCADMC
AKAGRTVAIIDGFGVLDAHWGGTNPYTVSLNPMGAVVSSFVKANGELIFSTENANQALIEEPPRDQRNTYWRDEPRTLGE
FCTCVLLKRNPRLATPGGVWSILSDPKLLLDMAQVEAEEGDDYLRALALHVLGMARNEEHFPQHRAAALKALRVYAASSP
LHRAGVGATRTHEDLIRQKAVIFLVGPVRHMERLGADYALHLQSFMEVVLSGRAPPVTFILDEFTNAPLKALVSQLTTMR
GYGGNCLMIAQSRSEIQRRYGDKETLTIEENAVVKQWFGFSSFEEAERVSHAIGEALAVSRALGIQSGQFGVSSNYSTAK
ERLFTAEELMRLPPDEQVIHVKDVGFIHCRKIRQNEIAPYCFDLAPNPLEGGLLAPDPKVWLEGGR

Specific function: Unknown

COG id: COG3505

COG function: function code U; Type IV secretory pathway, VirD4 components

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50996; Mature: 50865

Theoretical pI: Translated: 6.84; Mature: 6.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKTLMTQPVKRILGTGFDGKPIFAPRHSHALLLAAAGGGKTTCGAVPWLQSLVADTDTG
CCCHHHHHHHHHHHCCCCCCCCEECCCCCCEEEEEECCCCCCCCCHHHHHHHHHCCCCCC
RALVITDSKEGEIAAQCADMCAKAGRTVAIIDGFGVLDAHWGGTNPYTVSLNPMGAVVSS
CEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCCEEECCCCCCCCEEEEECCHHHHHHH
FVKANGELIFSTENANQALIEEPPRDQRNTYWRDEPRTLGEFCTCVLLKRNPRLATPGGV
HHHCCCCEEEEECCCCCHHCCCCCCCCCCCCCCCCCHHHHHHHHEEEEECCCCCCCCCCC
WSILSDPKLLLDMAQVEAEEGDDYLRALALHVLGMARNEEHFPQHRAAALKALRVYAASS
CHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCC
PLHRAGVGATRTHEDLIRQKAVIFLVGPVRHMERLGADYALHLQSFMEVVLSGRAPPVTF
CHHHHCCCCCCCHHHHHHCCEEEEEECCHHHHHHHCCHHHHHHHHHHHHHHCCCCCCEEE
ILDEFTNAPLKALVSQLTTMRGYGGNCLMIAQSRSEIQRRYGDKETLTIEENAVVKQWFG
EEHHHCCCHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHCCCCCEEEEECCHHHHHHCC
FSSFEEAERVSHAIGEALAVSRALGIQSGQFGVSSNYSTAKERLFTAEELMRLPPDEQVI
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEE
HVKDVGFIHCRKIRQNEIAPYCFDLAPNPLEGGLLAPDPKVWLEGGR
EEECCCEEEHHHHHCCCCCCEEEECCCCCCCCCEECCCCCEEECCCC
>Mature Secondary Structure 
AKTLMTQPVKRILGTGFDGKPIFAPRHSHALLLAAAGGGKTTCGAVPWLQSLVADTDTG
CCHHHHHHHHHHHCCCCCCCCEECCCCCCEEEEEECCCCCCCCCHHHHHHHHHCCCCCC
RALVITDSKEGEIAAQCADMCAKAGRTVAIIDGFGVLDAHWGGTNPYTVSLNPMGAVVSS
CEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCCEEECCCCCCCCEEEEECCHHHHHHH
FVKANGELIFSTENANQALIEEPPRDQRNTYWRDEPRTLGEFCTCVLLKRNPRLATPGGV
HHHCCCCEEEEECCCCCHHCCCCCCCCCCCCCCCCCHHHHHHHHEEEEECCCCCCCCCCC
WSILSDPKLLLDMAQVEAEEGDDYLRALALHVLGMARNEEHFPQHRAAALKALRVYAASS
CHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCC
PLHRAGVGATRTHEDLIRQKAVIFLVGPVRHMERLGADYALHLQSFMEVVLSGRAPPVTF
CHHHHCCCCCCCHHHHHHCCEEEEEECCHHHHHHHCCHHHHHHHHHHHHHHCCCCCCEEE
ILDEFTNAPLKALVSQLTTMRGYGGNCLMIAQSRSEIQRRYGDKETLTIEENAVVKQWFG
EEHHHCCCHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHCCCCCEEEEECCHHHHHHCC
FSSFEEAERVSHAIGEALAVSRALGIQSGQFGVSSNYSTAKERLFTAEELMRLPPDEQVI
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEE
HVKDVGFIHCRKIRQNEIAPYCFDLAPNPLEGGLLAPDPKVWLEGGR
EEECCCEEEHHHHHCCCCCCEEEECCCCCCCCCEECCCCCEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA