| Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
|---|---|
| Accession | NC_009720 |
| Length | 5,308,934 |
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The map label for this gene is 154244189
Identifier: 154244189
GI number: 154244189
Start: 240993
End: 241823
Strand: Reverse
Name: 154244189
Synonym: Xaut_0232
Alternate gene names: NA
Gene position: 241823-240993 (Counterclockwise)
Preceding gene: 154244190
Following gene: 154244188
Centisome position: 4.56
GC content: 69.68
Gene sequence:
>831_bases GTGAGCGGACCGTCTAACTCCATCCTCCTCGTCGGCGAGAGCGGCGTGGGCAAGACGCACTACGGCGCGCAGCTGCTGAG GCGCCTGATGCGGGTGAAGGGCGCGCTGCGCATGAACGGCGCGGCCACCAACCTCGAGGCCTTTGAGACCGCGCTCGAGA GCCTCGACGAGGGGCGGGCCGCCGGCCATACGGCGCGCACCGTCAACGTCGACAGCGTATGGCCGGTGGTCGACGGCGAC GGCCGGCAGGCCGACCTAGTCTGGCCGGAATACGGCGGCGAGCAGATCAAGTCGGTGATCGAGAACCGGCGCCTCCCAGA CGCGTGGCAGAAGCGCGTCGTCGGGGCCGATGCTTGGCTGCTCCTCATCCGGCTGCAGCAGGCCATCGTCGGCGACGACA TGTTCTCGAAGCCGCTCGCCGACCTGAAGGGCGCATCGGTCGAGAACCGAGAGGTGCAGCAGTCCGACCAGGCCCGGCTG GTGGAACTGCTGCAGATGCTGATCTTCTCCTACGGATCGGCCGCTAAGGCGCAGCGGGTCCCGCGGTTCGGCGTGCTCCT CACCTGCTGGGACGAGGCGGCGCCCCCGCAGACGCCGGCAGCGGCGCTCGCCGCCAGGCTGCCGCTTGTCTCGGCGTTCG TGCGGTCGAACTGGCGCCAGCCGCTCATCATGGGGCTCTCTGCTCTCGAGCGGCCGCTCAGTCCCACCACGCGCGACATG GACTACGCCAGCAAGGGGCCCGAACACTTCGGCTACGTCATCGAGGCGGACGGCACCAAGAGCAGCGACCTCACCCTGCC GATCCACCACCTGCTCAGCGCCGGCGGCTGA
Upstream 100 bases:
>100_bases TCCTCCAGTGGGCGATCGACGTCCGGCGCCCGGGCGTAAGGCTGCCCACGCTTGCGTCCACGTCCGACGACCCGCTGTTC ATCTACGGGAGCAGGAAGCC
Downstream 100 bases:
>100_bases AGGGACGGGGAGCGCGGATGCGCGTCGACCAAGCGATATACGGCACCATCAGGAACGGGCATGGGCTCAGGTGCGCGAGC GGCGACCGCAGGCTCGCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 276; Mature: 275
Protein sequence:
>276_residues MSGPSNSILLVGESGVGKTHYGAQLLRRLMRVKGALRMNGAATNLEAFETALESLDEGRAAGHTARTVNVDSVWPVVDGD GRQADLVWPEYGGEQIKSVIENRRLPDAWQKRVVGADAWLLLIRLQQAIVGDDMFSKPLADLKGASVENREVQQSDQARL VELLQMLIFSYGSAAKAQRVPRFGVLLTCWDEAAPPQTPAAALAARLPLVSAFVRSNWRQPLIMGLSALERPLSPTTRDM DYASKGPEHFGYVIEADGTKSSDLTLPIHHLLSAGG
Sequences:
>Translated_276_residues MSGPSNSILLVGESGVGKTHYGAQLLRRLMRVKGALRMNGAATNLEAFETALESLDEGRAAGHTARTVNVDSVWPVVDGD GRQADLVWPEYGGEQIKSVIENRRLPDAWQKRVVGADAWLLLIRLQQAIVGDDMFSKPLADLKGASVENREVQQSDQARL VELLQMLIFSYGSAAKAQRVPRFGVLLTCWDEAAPPQTPAAALAARLPLVSAFVRSNWRQPLIMGLSALERPLSPTTRDM DYASKGPEHFGYVIEADGTKSSDLTLPIHHLLSAGG >Mature_275_residues SGPSNSILLVGESGVGKTHYGAQLLRRLMRVKGALRMNGAATNLEAFETALESLDEGRAAGHTARTVNVDSVWPVVDGDG RQADLVWPEYGGEQIKSVIENRRLPDAWQKRVVGADAWLLLIRLQQAIVGDDMFSKPLADLKGASVENREVQQSDQARLV ELLQMLIFSYGSAAKAQRVPRFGVLLTCWDEAAPPQTPAAALAARLPLVSAFVRSNWRQPLIMGLSALERPLSPTTRDMD YASKGPEHFGYVIEADGTKSSDLTLPIHHLLSAGG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29964; Mature: 29832
Theoretical pI: Translated: 6.69; Mature: 6.69
Prosite motif: PS00675 SIGMA54_INTERACT_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGPSNSILLVGESGVGKTHYGAQLLRRLMRVKGALRMNGAATNLEAFETALESLDEGRA CCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCC AGHTARTVNVDSVWPVVDGDGRQADLVWPEYGGEQIKSVIENRRLPDAWQKRVVGADAWL CCCCEEEEECCCCCCEECCCCCEEEEECCCCCHHHHHHHHHCCCCCHHHHHHHCCCHHHH LLIRLQQAIVGDDMFSKPLADLKGASVENREVQQSDQARLVELLQMLIFSYGSAAKAQRV HHHHHHHHHHCCHHHHCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCC PRFGVLLTCWDEAAPPQTPAAALAARLPLVSAFVRSNWRQPLIMGLSALERPLSPTTRDM CCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCC DYASKGPEHFGYVIEADGTKSSDLTLPIHHLLSAGG CHHHCCCCCCCEEEEECCCCCCCCEEHHHHHHCCCC >Mature Secondary Structure SGPSNSILLVGESGVGKTHYGAQLLRRLMRVKGALRMNGAATNLEAFETALESLDEGRA CCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCC AGHTARTVNVDSVWPVVDGDGRQADLVWPEYGGEQIKSVIENRRLPDAWQKRVVGADAWL CCCCEEEEECCCCCCEECCCCCEEEEECCCCCHHHHHHHHHCCCCCHHHHHHHCCCHHHH LLIRLQQAIVGDDMFSKPLADLKGASVENREVQQSDQARLVELLQMLIFSYGSAAKAQRV HHHHHHHHHHCCHHHHCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCC PRFGVLLTCWDEAAPPQTPAAALAARLPLVSAFVRSNWRQPLIMGLSALERPLSPTTRDM CCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCC DYASKGPEHFGYVIEADGTKSSDLTLPIHHLLSAGG CHHHCCCCCCCEEEEECCCCCCCCEEHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA