Click here to switch to the map view.

The map label for this gene is 154244187

Identifier: 154244187

GI number: 154244187

Start: 237404

End: 238471

Strand: Reverse

Name: 154244187

Synonym: Xaut_0230

Alternate gene names: NA

Gene position: 238471-237404 (Counterclockwise)

Preceding gene: 154244188

Following gene: 154244186

Centisome position: 4.49

GC content: 66.57

Gene sequence:

>1068_bases
ATGCAGTTCAAGCAGGGCCGGGCGCTCGTAATAGGCATCGCGAACTACGAGGAGGTCCGGCGCCTACCCGAGGCCGTCCT
CAACGACGCGCGCGATACCGCCGATACGCTGAGGTCGTCGTCATACTGTGGCTATCCCGAAGCGAACGTGACCGTCCTCA
CCGACGGCCAAGCGACGCTCGAGGGCATCCGCAAGGCGCTCGCCGACCTCGCCGCCGACGCGACCGCCGACGACACCGTT
GCGATATTCTTCTCCGGCCACGGCACGCGCGTCGGCTTGGGCCGGGCTGCGACGAGTGCGCTCGTCCCTTACGACTGCAA
GCGCGGTGATCTCGCGGGCACCTCACTGGGCGAAGTCGAACTGTCGGCCGCGATATCGGCGATCAAGGCGTCCCGCGTCG
TCGTCAGCATCGACGCATGCCATGCAGCCGGCGCCGCCACGCTCAAGTCCGATCTCGAGGGGGACCACGACGACGGGCTG
GACGAGGGTTTCGACGAGAAGTCGCTGCAGCAGCTGGCGAGTGGAACCGGACGCGTCGTGTTCGCATCGTCTCGCGCGAC
CGAGACTTCTCTCGTACGGAAACGCGAGCGCAACAGCGTGTTCACGACTGCTCTGCTCGCTGGCCTCAAAGGCGCCGCAG
TGGCGGCGGACGACGGGACGATCCGAGTGTTCGACCTTTTCAACTACGTTTCCGAGGCGGTAAGGCAAGCTGCGCCGGGT
CGACAACACCCCATATTTAAGGCCTCCAACCTTGAGGAGAACTTTCCCGTCGCGCTTGTGCTGGGCGGCACTAAAACCAT
TGCGCCCAAAGCGAACTGCCGGGAGCGCCAGCTTGAGCAGATCATGTCTGACCTGTTCCCCGCCGGCCCGACAGACCAGC
AGATATGGCTGCGCGCGGGCGGCGAAGTGGCCAACCTCGCGCTCGGCGGTACCGGTCGGGCCCAGTGGTTCTCGGCGCTC
CGCTTGCTGTCGCAGGGCGGCGGCGGGGGCAGTGTCACTCGCGAGAGCCTGATCGACGCGGCGTTGGAGGAGTTCCCCGC
CCACCGCGAGCTCGGGGCGCTGCGCTGA

Upstream 100 bases:

>100_bases
AGATGCGAACCGACTTCCCCCAGAACCCCAACCTTAGAATGCTGGCCGGCGACGCACTGTTCCGCAGCTGAGCCGGCGCG
CGCTGACCACGGAGACAAGC

Downstream 100 bases:

>100_bases
TCCGCACTTAACCAAGGTTGGAGCCGGTTACGTGTGGGTGCCTGTCGCCGAGTCGGCAATCTGCATATCGGTGATTGGTG
GCTATTGTCGATTAGTGATT

Product: peptidase C14 caspase catalytic subunit p20

Products: NA

Alternate protein names: Peptidase C; Caspase Domain Protein; WD-40 Repeat-Containing Protein

Number of amino acids: Translated: 355; Mature: 355

Protein sequence:

>355_residues
MQFKQGRALVIGIANYEEVRRLPEAVLNDARDTADTLRSSSYCGYPEANVTVLTDGQATLEGIRKALADLAADATADDTV
AIFFSGHGTRVGLGRAATSALVPYDCKRGDLAGTSLGEVELSAAISAIKASRVVVSIDACHAAGAATLKSDLEGDHDDGL
DEGFDEKSLQQLASGTGRVVFASSRATETSLVRKRERNSVFTTALLAGLKGAAVAADDGTIRVFDLFNYVSEAVRQAAPG
RQHPIFKASNLEENFPVALVLGGTKTIAPKANCRERQLEQIMSDLFPAGPTDQQIWLRAGGEVANLALGGTGRAQWFSAL
RLLSQGGGGGSVTRESLIDAALEEFPAHRELGALR

Sequences:

>Translated_355_residues
MQFKQGRALVIGIANYEEVRRLPEAVLNDARDTADTLRSSSYCGYPEANVTVLTDGQATLEGIRKALADLAADATADDTV
AIFFSGHGTRVGLGRAATSALVPYDCKRGDLAGTSLGEVELSAAISAIKASRVVVSIDACHAAGAATLKSDLEGDHDDGL
DEGFDEKSLQQLASGTGRVVFASSRATETSLVRKRERNSVFTTALLAGLKGAAVAADDGTIRVFDLFNYVSEAVRQAAPG
RQHPIFKASNLEENFPVALVLGGTKTIAPKANCRERQLEQIMSDLFPAGPTDQQIWLRAGGEVANLALGGTGRAQWFSAL
RLLSQGGGGGSVTRESLIDAALEEFPAHRELGALR
>Mature_355_residues
MQFKQGRALVIGIANYEEVRRLPEAVLNDARDTADTLRSSSYCGYPEANVTVLTDGQATLEGIRKALADLAADATADDTV
AIFFSGHGTRVGLGRAATSALVPYDCKRGDLAGTSLGEVELSAAISAIKASRVVVSIDACHAAGAATLKSDLEGDHDDGL
DEGFDEKSLQQLASGTGRVVFASSRATETSLVRKRERNSVFTTALLAGLKGAAVAADDGTIRVFDLFNYVSEAVRQAAPG
RQHPIFKASNLEENFPVALVLGGTKTIAPKANCRERQLEQIMSDLFPAGPTDQQIWLRAGGEVANLALGGTGRAQWFSAL
RLLSQGGGGGSVTRESLIDAALEEFPAHRELGALR

Specific function: Unknown

COG id: COG4249

COG function: function code R; Uncharacterized protein containing caspase domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37388; Mature: 37388

Theoretical pI: Translated: 5.13; Mature: 5.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQFKQGRALVIGIANYEEVRRLPEAVLNDARDTADTLRSSSYCGYPEANVTVLTDGQATL
CCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCHHHH
EGIRKALADLAADATADDTVAIFFSGHGTRVGLGRAATSALVPYDCKRGDLAGTSLGEVE
HHHHHHHHHHHCCCCCCCEEEEEEECCCCEEECCHHHHHCCCCCCCCCCCCCCCCCCHHH
LSAAISAIKASRVVVSIDACHAAGAATLKSDLEGDHDDGLDEGFDEKSLQQLASGTGRVV
HHHHHHHHHHCEEEEEEECHHCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCEEE
FASSRATETSLVRKRERNSVFTTALLAGLKGAAVAADDGTIRVFDLFNYVSEAVRQAAPG
EECCCCHHHHHHHHHHHCHHHHHHHHHCCCCCEEECCCCCEEHHHHHHHHHHHHHHHCCC
RQHPIFKASNLEENFPVALVLGGTKTIAPKANCRERQLEQIMSDLFPAGPTDQQIWLRAG
CCCCCEECCCCCCCCCEEEEECCCCEECCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECC
GEVANLALGGTGRAQWFSALRLLSQGGGGGSVTRESLIDAALEEFPAHRELGALR
CCEEEEEECCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHCCCC
>Mature Secondary Structure
MQFKQGRALVIGIANYEEVRRLPEAVLNDARDTADTLRSSSYCGYPEANVTVLTDGQATL
CCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCHHHH
EGIRKALADLAADATADDTVAIFFSGHGTRVGLGRAATSALVPYDCKRGDLAGTSLGEVE
HHHHHHHHHHHCCCCCCCEEEEEEECCCCEEECCHHHHHCCCCCCCCCCCCCCCCCCHHH
LSAAISAIKASRVVVSIDACHAAGAATLKSDLEGDHDDGLDEGFDEKSLQQLASGTGRVV
HHHHHHHHHHCEEEEEEECHHCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCEEE
FASSRATETSLVRKRERNSVFTTALLAGLKGAAVAADDGTIRVFDLFNYVSEAVRQAAPG
EECCCCHHHHHHHHHHHCHHHHHHHHHCCCCCEEECCCCCEEHHHHHHHHHHHHHHHCCC
RQHPIFKASNLEENFPVALVLGGTKTIAPKANCRERQLEQIMSDLFPAGPTDQQIWLRAG
CCCCCEECCCCCCCCCEEEEECCCCEECCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECC
GEVANLALGGTGRAQWFSALRLLSQGGGGGSVTRESLIDAALEEFPAHRELGALR
CCEEEEEECCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA