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The map label for this gene is yecS [H]

Identifier: 154244133

GI number: 154244133

Start: 171966

End: 172619

Strand: Direct

Name: yecS [H]

Synonym: Xaut_0175

Alternate gene names: 154244133

Gene position: 171966-172619 (Clockwise)

Preceding gene: 154244132

Following gene: 154244134

Centisome position: 3.24

GC content: 63.46

Gene sequence:

>654_bases
ATGCCAACTTTCACCCTCATCCACTTCCAGTTCCTGTGCTGGGCGGCACTGTGGACCGTCGGCCTGTCGGCCATCGCCTT
CGTGGGCGGCGGGCTCGTGGGCTTCGGCGTCGCCCTCGCCCGCATCTCCTCCACGCGCTGGGTGCGCATCCTCGCCACCG
CCTATATCCAGGTGGTACAGGGCACGCCGCTGCTCATCCTGCTCTTCTTGTTCTACTTCGGAATCGCCATCGCAGGCTTC
AAGGAAGTGCCGGCCATCCTCGCCGCCGGCCTCGGCCTCACCATCTATTCATCAGGCTTTCTTGCCGAAATCTGGCGCGG
TTGCATCGAGAGCGTGCCCAAGACCCAGTGGGAGGCGGCCGAATGCCTTTCGCTCAGCCGCTGGCAGCGCCTGACCCGCG
TGATCTTGCCCCAGGCCATGCGCATCGCCACCGCGCCTACGGTCGGCTTCCTGGTGCAGATCGTGAAGAATACCTCGCTC
GCCTCCGTGGTGGGCTTCGTGGAGCTGTCGCAGGCCGGCAAGCTCGTCAACAATTCCATCTTCGAGCCGTTCACCATCTT
CATGGTGGTGGCCGCCATCTACTTCGTCCTCTGCTATCCGCTCTCGACCTGGAGCCGCAGTCTCGAAAGGAAGCTCAATG
TCGGCCGTCGTTAG

Upstream 100 bases:

>100_bases
CGCCTTATCGTTCGTGGTGCGCATCGCCTTCTGGCTGTTCGGCCTCGTGGTCTTCGTGCGCCGGCGCAAGCTCGGCACGG
CGCTCTGAGGGGGAACGAAA

Downstream 100 bases:

>100_bases
TCTGACCAACGTGGAAAAGAGCTTCGGCGCGGTGAAGGTGCTGAATGGCGTCTCCTTCGAGGTGGCGCGCGGCGAGGTGG
CGGCGGTCATCGGCCAGTCC

Product: polar amino acid ABC transporter inner membrane subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 217; Mature: 216

Protein sequence:

>217_residues
MPTFTLIHFQFLCWAALWTVGLSAIAFVGGGLVGFGVALARISSTRWVRILATAYIQVVQGTPLLILLFLFYFGIAIAGF
KEVPAILAAGLGLTIYSSGFLAEIWRGCIESVPKTQWEAAECLSLSRWQRLTRVILPQAMRIATAPTVGFLVQIVKNTSL
ASVVGFVELSQAGKLVNNSIFEPFTIFMVVAAIYFVLCYPLSTWSRSLERKLNVGRR

Sequences:

>Translated_217_residues
MPTFTLIHFQFLCWAALWTVGLSAIAFVGGGLVGFGVALARISSTRWVRILATAYIQVVQGTPLLILLFLFYFGIAIAGF
KEVPAILAAGLGLTIYSSGFLAEIWRGCIESVPKTQWEAAECLSLSRWQRLTRVILPQAMRIATAPTVGFLVQIVKNTSL
ASVVGFVELSQAGKLVNNSIFEPFTIFMVVAAIYFVLCYPLSTWSRSLERKLNVGRR
>Mature_216_residues
PTFTLIHFQFLCWAALWTVGLSAIAFVGGGLVGFGVALARISSTRWVRILATAYIQVVQGTPLLILLFLFYFGIAIAGFK
EVPAILAAGLGLTIYSSGFLAEIWRGCIESVPKTQWEAAECLSLSRWQRLTRVILPQAMRIATAPTVGFLVQIVKNTSLA
SVVGFVELSQAGKLVNNSIFEPFTIFMVVAAIYFVLCYPLSTWSRSLERKLNVGRR

Specific function: Probably part of the binding-protein-dependent transport system yecCS for an amino acid; probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788226, Length=207, Percent_Identity=37.1980676328502, Blast_Score=132, Evalue=2e-32,
Organism=Escherichia coli, GI87082239, Length=206, Percent_Identity=29.6116504854369, Blast_Score=100, Evalue=1e-22,
Organism=Escherichia coli, GI1787030, Length=215, Percent_Identity=30.2325581395349, Blast_Score=91, Evalue=4e-20,
Organism=Escherichia coli, GI1788645, Length=204, Percent_Identity=27.9411764705882, Blast_Score=88, Evalue=4e-19,
Organism=Escherichia coli, GI1788646, Length=198, Percent_Identity=28.7878787878788, Blast_Score=82, Evalue=2e-17,
Organism=Escherichia coli, GI48994930, Length=142, Percent_Identity=33.0985915492958, Blast_Score=77, Evalue=9e-16,
Organism=Escherichia coli, GI1786874, Length=182, Percent_Identity=29.6703296703297, Blast_Score=71, Evalue=5e-14,
Organism=Escherichia coli, GI1787086, Length=177, Percent_Identity=28.2485875706215, Blast_Score=67, Evalue=9e-13,
Organism=Escherichia coli, GI1787087, Length=209, Percent_Identity=25.8373205741627, Blast_Score=65, Evalue=3e-12,
Organism=Escherichia coli, GI1786873, Length=202, Percent_Identity=25.2475247524752, Blast_Score=65, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 23856; Mature: 23724

Theoretical pI: Translated: 10.25; Mature: 10.25

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTFTLIHFQFLCWAALWTVGLSAIAFVGGGLVGFGVALARISSTRWVRILATAYIQVVQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GTPLLILLFLFYFGIAIAGFKEVPAILAAGLGLTIYSSGFLAEIWRGCIESVPKTQWEAA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHCCCCHHHHH
ECLSLSRWQRLTRVILPQAMRIATAPTVGFLVQIVKNTSLASVVGFVELSQAGKLVNNSI
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCC
FEPFTIFMVVAAIYFVLCYPLSTWSRSLERKLNVGRR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
PTFTLIHFQFLCWAALWTVGLSAIAFVGGGLVGFGVALARISSTRWVRILATAYIQVVQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GTPLLILLFLFYFGIAIAGFKEVPAILAAGLGLTIYSSGFLAEIWRGCIESVPKTQWEAA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHCCCCHHHHH
ECLSLSRWQRLTRVILPQAMRIATAPTVGFLVQIVKNTSLASVVGFVELSQAGKLVNNSI
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCC
FEPFTIFMVVAAIYFVLCYPLSTWSRSLERKLNVGRR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]